Silkworm Genome Informatics Database

Gene

KWMTBOMO15887

Pre Gene Modal

BGIBMGA013374

Annotation

PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]

Location

Bomo_Chr27(+):694912-700886 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.959

CDS

ATGCCTATGATTGTGGAAGATGCAAAGGCACTAAGTTGTACTCAAGATGGGGAAAGTAGAAAAGCCCTATTAGAACGAATTAAAGCTCTTTGTGAAGCTACCAAGTCTTTATGTGGTTATGCTGAAGATCCGATGGAATTGAAGGAGTCTACATCCAAGTTATCTGATGCTTCACAGAAACTCAAGTTTGTGTTTAGCTCCAACAGAGATCCCACTAGTCTACAGAAAGAGAAAAAGATCATAGATCTAGCATCATCAGCATGCGGCACAGCTTCTCAGATGTTAAGTAAGGTGCAGCAGATATCGGACGAGATAGGAGGAGATGCGGGAATGACGCTAGACGTGGCTGGAACTAGAGTAGTCGATTCTACAAAGAATATGCTGACCACTGCACAGTTAACTGCACCATCCATTGAAGAGCCGACGTGTCGGTCAGCCTTACTCGCGGCGGTCGATGGGGTCTCCAACTCGAGCCAGGAGTTGCAAGATTGCTGGAAACAACTTCGTCATCCCCAAATAGGGGTATTGGATTACGAACACAAACTCTTGGAAGATGAACTGGAACAAATCCGGGTCGCTTGCCAAGATGCCGACCTGCAAGGGCCTACTAAAATACCCATAACGGAAAAGCCGAAGGTACTCCAGAAACCATCTTCAATCAAACCTGGTATTGCGACTAAACCAAGTTTGAAAGCTAACCCGCTTACTGGCCCAGTTGTGAAGACCGGCGACGGAAGTGTTGACAAACTTCGGGAAAATCAGTTGAACTCTCCGATGGCAACGTCACACGTACAGTCATCGAGCGTGAATGCAGACCAAGAGAAACTTCTCGAAAGGCTCAAAACGACTGTAGATGAAGCGAATAAAAAAATACGAAAAGTGGAAGATGAAATAAAACAGGCAAACGAGTTTGGCGAGGTCAAGCCTTTATTGAATATTAGCTCAAGTGAACTCTCCAATAAGAAAAAGAAAATGCAGGACAACTTAGCGTTAGCGAGTGTTCAAGTGGCGTCTTTGGTGGCTGTAAATTATGCTGATAAAATAGATTATGAGACGGCACAGAAATCCATAAAATCATTACCGCAACTGACATCTGATATCGTACACGATGGAATACTAACCAGCAAAACGTTGAAGACTGACGCAAGAAAAGCATTTCTAGATGACATGCTGAATTATTGCGAAGCTACGAAGCAACTTTGTGATACCGCCAAAAATGATAGAGGGGTATTCTTCTATTTCATTTCTCATTTCTAA

Protein

MPMIVEDAKALSCTQDGESRKALLERIKALCEATKSLCGYAEDPMELKESTSKLSDASQKLKFVFSSNRDPTSLQKEKKIIDLASSACGTASQMLSKVQQISDEIGGDAGMTLDVAGTRVVDSTKNMLTTAQLTAPSIEEPTCRSALLAAVDGVSNSSQELQDCWKQLRHPQIGVLDYEHKLLEDELEQIRVACQDADLQGPTKIPITEKPKVLQKPSSIKPGIATKPSLKANPLTGPVVKTGDGSVDKLRENQLNSPMATSHVQSSSVNADQEKLLERLKTTVDEANKKIRKVEDEIKQANEFGEVKPLLNISSSELSNKKKKMQDNLALASVQVASLVAVNYADKIDYETAQKSIKSLPQLTSDIVHDGILTSKTLKTDARKAFLDDMLNYCEATKQLCDTAKNDRGVFFYFISHF

Uniprot

H9JV11 A0A0N0PCT8 A0A2H1VGD4

Pubmed

19121390 26354079

EMBL

BABH01037491 BABH01037492 BABH01037493 BABH01037494 KQ460466 KPJ14605.1 + More
ODYU01002411 SOQ39856.1

Proteomes

UP000005204 UP000053240

PRIDE

H9JV11

Pfam

PF09141   Talin_middle        + More
PF00373   FERM_M
PF09379   FERM_N
PF16511   FERM_f0

Interpro

IPR036476   Talin_cent_sf        + More
IPR015224   Talin_cent
IPR035964   I/LWEQ_dom_sf
IPR032425   FERM_f0
IPR014352   FERM/acyl-CoA-bd_prot_sf
IPR019749   Band_41_domain
IPR035963   FERM_2
IPR018979   FERM_N
IPR019748   FERM_central
IPR036723   Alpha-catenin/vinculin-like_sf
IPR011993   PH-like_dom_sf
IPR000299   FERM_domain

SUPFAM

SSF109880   SSF109880        + More
SSF109885   SSF109885
SSF47220   SSF47220
SSF47031   SSF47031

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd14473 FERM_B-lobe

ProteinModelPortal

H9JV11 A0A0N0PCT8 A0A2H1VGD4

KEGG

101735325 no KO assigned | (RefSeq) uncharacterized LOC101735325

GO

GO:0003779 GO:0001726 GO:0005925 GO:0005200 GO:0007016 GO:0051015 GO:0005856 GO:0007155

Length:

418

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02768

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00620

outside

1 - 418

Pi

19.487687

Theta

170.378166

Tajima's D

0.213954

CLR

18.635517

CSRT

0.428078596070196

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics