Silkworm Genome Informatics Database

Gene

KWMTBOMO15885

Pre Gene Modal

BGIBMGA013374

Annotation

PREDICTED:_uncharacterized_protein_LOC101735325_[Bombyx_mori]

Location

Bomo_Chr27(+):673952-677996 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.569 Extracellular Reliability : 1.315 Nuclear Reliability : 1.44

CDS

ATGCAGGAGGCCTGTAACGGCTACGCCGATGTCTCCAGGAAGCTATTGTGTGCCCTTGGTCGCGGTGGTAATATGGACAAAGAGGTTGAGATCATAGATTTATCCAAAAATGTTGGAGATAAATCTTCGAACTTGTTGGACACTGTGGACAAACTCCTCGGTGAAGTTCCTGACAACGATAGTTCGGCATCGAAGGAAGTTGTTGACGCTAAGTCCAGAGTAGCTTATTGCGCGAGGGACCTGCTCGCGTGTGCTCAGCTGACTGCCCCGTCACTTCACGAACCACACTGTCGAAGTGCTCTAATGGCCGCTTCCGAAGCCCTTTCATCGTCAGTGCAGCATTTGGCCCTGGTCTGGAAACCGTTAGTGGAGGACCCGAGTAGAAATCATCATAGAGAGGCCCTGAAGCACAACTCGTTGTTAATAGCGCGAGCTTTGGACGCTCTGAAGAATGCTGTCGGATCTTTAGGCGACAGCGAGAGTTCCGATACCGGAGATGATCAGAAACAGCGTGAGTTAAGAAGATTGAAGTTCATCAACAGTGCAGCACAAGCTAAGAAGAACTTGGAGGATGCCAGGAATGAGTTAAACGAGCCAGCTATATGCCAGTTAATGAGAGAAGAAGATGCAGCGAGATTGCAAAGCGGCCTAGCGGATAAGTTGGCGCAACTAAACGCCGCGATTGCTGCTCTCATTTCTTCCACATCAGGTATACATTTCGGCTGTTTAGTGTGA

Protein

MQEACNGYADVSRKLLCALGRGGNMDKEVEIIDLSKNVGDKSSNLLDTVDKLLGEVPDNDSSASKEVVDAKSRVAYCARDLLACAQLTAPSLHEPHCRSALMAASEALSSSVQHLALVWKPLVEDPSRNHHREALKHNSLLIARALDALKNAVGSLGDSESSDTGDDQKQRELRRLKFINSAAQAKKNLEDARNELNEPAICQLMREEDAARLQSGLADKLAQLNAAIAALISSTSGIHFGCLV

Uniprot

H9JV11 A0A2A4JND2 A0A0N0PCT8 A0A194PR75 A0A2W1BLD3 A0A212ETY4 + More
A0A2W1BFF7 A0A2W1BFN3 A0A2A4JJH4 A0A2H1VGD4 A0A2H1W7Y9

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01037491 BABH01037492 BABH01037493 BABH01037494 NWSH01000974 PCG73329.1 + More
KQ460466 KPJ14605.1 KQ459597 KPI95249.1 KZ150183 PZC72483.1 AGBW02012523 OWR44939.1 PZC72485.1 PZC72484.1 NWSH01001208 PCG72121.1 ODYU01002411 SOQ39856.1 ODYU01006922 SOQ49199.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151

PRIDE

H9JV11

Pfam

PF09141   Talin_middle        + More
PF00373   FERM_M
PF09379   FERM_N
PF16511   FERM_f0
PF01044   Vinculin

Interpro

IPR036476   Talin_cent_sf        + More
IPR015224   Talin_cent
IPR035964   I/LWEQ_dom_sf
IPR032425   FERM_f0
IPR014352   FERM/acyl-CoA-bd_prot_sf
IPR019749   Band_41_domain
IPR035963   FERM_2
IPR018979   FERM_N
IPR019748   FERM_central
IPR036723   Alpha-catenin/vinculin-like_sf
IPR011993   PH-like_dom_sf
IPR000299   FERM_domain
IPR006077   Vinculin/catenin
IPR017997   Vinculin

SUPFAM

SSF109880   SSF109880        + More
SSF109885   SSF109885
SSF47220   SSF47220
SSF47031   SSF47031

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd14473 FERM_B-lobe

ProteinModelPortal

H9JV11 A0A2A4JND2 A0A0N0PCT8 A0A194PR75 A0A2W1BLD3 A0A212ETY4 + More
A0A2W1BFF7 A0A2W1BFN3 A0A2A4JJH4 A0A2H1VGD4 A0A2H1W7Y9

KEGG

101735325 no KO assigned | (RefSeq) uncharacterized LOC101735325

GO

GO:0003779 GO:0001726 GO:0005925 GO:0005200 GO:0007016 GO:0051015 GO:0005856 GO:0007155 GO:0016021 GO:0004965 GO:0005891 GO:0043565 GO:0003677 GO:0003707 GO:0006281 GO:0006259

PANTHER

PTHR46180

Length:

244

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.82868

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13050

outside

1 - 244

Pi

204.196524

Theta

167.581019

Tajima's D

0.450236

CLR

0.000053

CSRT

0.496825158742063

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics