SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15884
Pre Gene Modal
BGIBMGA013374
Annotation
PREDICTED:_talin-1-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.146 Mitochondrial   Reliability : 1.206
 

Sequence

CDS
ATGGACAAAACATTACGGAGGGCGTCTTTCATCGCGGCCGCCACGACCACGCTTCACGCTTTGAACGCAGCGCAAAACGATATCGCTAAGGAATGTGGCGATCTAGAGTTAACGCCCGTCCAACAGGCGCAATTGCAGGAGTCTACATCGGAGAATGTAAGGAAGCTCAGTGCTGCTGTCGCGTTGTACTTGATGGCTCATGCAGGTTGGTCGATTAGTTTTTATTGA
Protein
MDKTLRRASFIAAATTTLHALNAAQNDIAKECGDLELTPVQQAQLQESTSENVRKLSAAVALYLMAHAGWSISFY

Summary

Uniprot
Pfam
PF09141   Talin_middle
Interpro
IPR036476   Talin_cent_sf        + More
IPR015224   Talin_cent       
IPR035964   I/LWEQ_dom_sf       
SUPFAM
SSF109880   SSF109880        + More
SSF109885   SSF109885       
ProteinModelPortal

Ontologies

Topology

Length:
75
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.58247
Exp number, first 60 AAs:
1.37638
Total prob of N-in:
0.61304
inside
1  -  75
 
 

Population Genetic Test Statistics

Pi
183.403863
Theta
138.65221
Tajima's D
0.963494
CLR
0.04845
CSRT
0.651867406629668
Interpretation
Uncertain
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