Gene

KWMTBOMO15883

Pre Gene Modal

BGIBMGA013373

Annotation

PREDICTED:_talin-1-like_[Papilio_machaon]

Location

Bomo_Chr27(+):661092-662326      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.009 Nuclear   Reliability : 1.074

CDS

ATGAAAGGTAAAAAGAAGTTGATACCACGTCTCCTGGGCATCAACGCTGAATCCATTCTGCGCCTAGACGAGACTACGAAAGAAATCCTGCAAGTTTGGCCCTTGACTCACGTGAAGACCTATAACGTTGCCAACGCCGAGGCTTTTATTCTGAACTTCGGCGAATACAGTGAGGAACCGTACACCGTGAAGACCAGAGACGCCAACCAGATCAGAGATATTCTGGAGGGCTACATCGATCTGATAGGGAAGAAGCTTCTGGCCAAGCATAACTTCAGCAGCTCCGATAGGATGATCATAACCGAAGATGAAGTAGCTCCTTCTAAGTGA

Protein

MKGKKKLIPRLLGINAESILRLDETTKEILQVWPLTHVKTYNVANAEAFILNFGEYSEEPYTVKTRDANQIRDILEGYIDLIGKKLLAKHNFSSSDRMIITEDEVAPSK

Uniprot

H9JV10   A0A0N0PCT8   A0A194PR75   A0A2H1WD21   A0A2A4JNG9   A0A2W1BLD3   + More
V5GXZ8   A0A1W4XBC3   U4U8Q8   A0A2G8JSL3   N6TI33   A0A087ZS13   A0A2A4JH17   A0A2H1VDQ4   E9JDA6   H9IVT9   A0A194PUE4   A0A194RIG4   A0A212FBU1   A0A1Y1LQD1   A0A1Y1LTW5   A0A182SD41   B7QM86   A0A0J7N8L8   A0A1Y1LRW5   J9JL63   A0A023GL65   A0A0S7HVU1   A0A1B6JKU4   A0A3S2NVB7   A0A131XZA4   V5IGE5   A0A0T6B1I5   A0A2S2NRS5   A0A1B6LJF3   V8PGR1   A0A2S2Q9F0   A0A2H8TJ46   A0A1A8J134   A0A212ETY4   A0A0S7JTA8   J9JU67   A0A182G5T2   A0A0L7LBG8   A0A023EVD0   A0A0S7JRK9   A0A1B6DNY2   A0A1B6BY27   Q176Z3   A0A2S2QV01   A0A0N8ERZ1   A0A139WG31   A0A182GR91   A0A2S2QWT8   A0A182QWM8   A0A0N0BGM5   Q3TN69   A0A2R5L7U9   A0A1E1XFD7   A0A154PRL0   A0A088AEI6   A0A131YGH8   A0A023EXJ4   A0A0S7HSH9   A0A3Q0IRT6   A0A3Q0ILZ7   A0A182I3A2   A0A182X3R7   Q7QJE3   A0A182TPN4   A0A182VF85   A0A182NHV9   A0A131XED9   A0A182PQF6   A0A131YM95   A0A224Z8Y2   L7MJY0   U6D3Q8   L7MJ63   S9X2E8   A0A0P5ZBF3   A0A0P6D242   A0A0P5VNJ7   A0A0P5BES2   A0A1B6GUN1   A0A0P5T638   A0A0P5AHK5   A0A0P5DTM4   A0A0N8DG33   M7B480   A0A151WI83   H3B1D1   A0A2K5S708   A0A1C7CZI8   A0A0P5AHI7   H9GDK3   A0A0P5C9D6   A0A1U7T365   A0A0P5BNV1   A0A2A3E5U7  

Pubmed

19121390    26354079    28756777    23537049    29023486    21282665    + More
22118469    28004739    25765539    24297900    26483478    26227816    24945155    17510324    26999592    18362917    19820115    10349636    11042159    11076861    11217851    12466851    16141073    28503490    26830274    12364791    28049606    28797301    25576852    23149746    23624526    9215903    20966253    21881562   

EMBL

BABH01037490    KQ460466    KPJ14605.1    KQ459597    KPI95249.1    ODYU01007842    + More
SOQ50970.1    NWSH01000974    PCG73326.1    KZ150183    PZC72483.1    GALX01003213    JAB65253.1    KB632095    ERL88738.1    MRZV01001323    PIK38708.1    APGK01025933    APGK01025934    APGK01025935    KB740605    ENN80059.1    NWSH01001427    PCG71271.1    ODYU01002006    SOQ38968.1    GL771866    EFZ09348.1    BABH01038074    BABH01038075    BABH01038076    KQ459593    KPI96374.1    KQ460152    KPJ17352.1    AGBW02009276    OWR51195.1    GEZM01051361    JAV75008.1    GEZM01051359    GEZM01051357    JAV75016.1    ABJB010002632    ABJB010062123    ABJB010379358    ABJB010428970    ABJB010506374    ABJB010562744    ABJB010575441    ABJB010633491    ABJB010781916    ABJB010798695    DS969850    EEC19958.1    LBMM01008317    KMQ88985.1    GEZM01051360    GEZM01051358    JAV75010.1    ABLF02040907    GBBM01000771    JAC34647.1    GBYX01437347    JAO44002.1    GECU01007852    JAS99854.1    RSAL01000058    RVE49730.1    GEFM01003222    JAP72574.1    GANP01006827    JAB77641.1    LJIG01016230    KRT81224.1    GGMR01006837    MBY19456.1    GEBQ01016146    JAT23831.1    AZIM01000142    ETE73062.1    GGMS01005153    MBY74356.1    GFXV01002245    MBW14050.1    HAED01015993    SBR02438.1    AGBW02012523    OWR44939.1    GBYX01231939    JAO67741.1    ABLF02024901    JXUM01043900    KQ561380    KXJ78773.1    JTDY01001911    KOB72561.1    GAPW01000510    JAC13088.1    GBYX01231948    JAO67736.1    GEDC01019901    GEDC01009902    GEDC01003946    JAS17397.1    JAS27396.1    JAS33352.1    GEDC01031369    GEDC01020851    GEDC01015209    JAS05929.1    JAS16447.1    JAS22089.1    CH477380    EAT42216.1    GGMS01012351    MBY81554.1    GDUN01000922    JAN94997.1    KQ971351    KYB26811.1    JXUM01082049    JXUM01082050    JXUM01082051    KQ563286    KXJ74128.1    GGMS01013026    MBY82229.1    AXCN02000381    KQ435782    KOX74764.1    AK165499    BAE38220.1    GGLE01001409    MBY05535.1    GFAC01001233    JAT97955.1    KQ435087    KZC14531.1    GEDV01011536    JAP77021.1    GAPW01000419    JAC13179.1    GBYX01437348    JAO44001.1    APCN01000204    AAAB01008807    EAA04618.3    GEFH01003634    JAP64947.1    GEDV01008164    JAP80393.1    GFPF01012237    MAA23383.1    GACK01001466    JAA63568.1    HAAF01005796    CCP77620.1    GACK01001711    JAA63323.1    KB016982    EPY81739.1    GDIP01048428    JAM55287.1    GDIQ01084023    JAN10714.1    GDIP01097621    JAM06094.1    GDIP01185359    JAJ38043.1    GECZ01003643    JAS66126.1    GDIP01132768    JAL70946.1    GDIP01198759    JAJ24643.1    GDIP01153021    JAJ70381.1    GDIP01037183    JAM66532.1    KB550683    EMP30300.1    KQ983089    KYQ47547.1    AFYH01009561    AFYH01009562    AFYH01009563    AFYH01009564    AFYH01009565    AFYH01009566    AFYH01009567    AFYH01009568    AFYH01009569    AFYH01009570    GDIP01198758    JAJ24644.1    AAWZ02035976    GDIP01174310    JAJ49092.1    GDIP01196860    JAJ26542.1    KZ288358    PBC27080.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000192223    UP000030742    + More
UP000230750    UP000019118    UP000005203    UP000007151    UP000075901    UP000001555    UP000036403    UP000007819    UP000283053    UP000069940    UP000249989    UP000037510    UP000008820    UP000007266    UP000075886    UP000053105    UP000076502    UP000079169    UP000075840    UP000076407    UP000007062    UP000075902    UP000075903    UP000075884    UP000075885    UP000031443    UP000075809    UP000008672    UP000233040    UP000075882    UP000001646    UP000189704    UP000242457   

PRIDE

H9JV10    H9IVT9    B7QM86    V5IGE5    Q3TN69    L7MJY0    + More
L7MJ63   

Pfam

PF00373   FERM_M        + More
PF09379   FERM_N
PF16511   FERM_f0
PF09141   Talin_middle
PF01044   Vinculin
PF10545   MADF_DNA_bdg
PF02174   IRS
PF01608   I_LWEQ
PF08913   VBS
PF00067   p450

Interpro

IPR019748   FERM_central        + More
IPR011993   PH-like_dom_sf       
IPR000299   FERM_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR035963   FERM_2       
IPR032425   FERM_f0       
IPR019749   Band_41_domain       
IPR018979   FERM_N       
IPR036723   Alpha-catenin/vinculin-like_sf       
IPR036476   Talin_cent_sf       
IPR015224   Talin_cent       
IPR035964   I/LWEQ_dom_sf       
IPR006077   Vinculin/catenin       
IPR004210   BESS_motif       
IPR006578   MADF-dom       
IPR029071   Ubiquitin-like_domsf       
IPR030224   Sla2_fam       
IPR019747   FERM_CS       
IPR002558   ILWEQ_dom       
IPR002404   IRS_PTB       
IPR015009   Vinculin-bd_dom       
IPR037438   Talin1/2-RS       
IPR036396   Cyt_P450_sf       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002401   Cyt_P450_E_grp-I       
IPR008069   Cyt_P450_E_grp-I_CYP2D-like       

SUPFAM

SSF47031   SSF47031        + More
SSF47220   SSF47220       
SSF109885   SSF109885       
SSF109880   SSF109880       
SSF54236   SSF54236       
SSF48264   SSF48264       

Gene 3D

1.20.80.10     2.30.29.30     1.10.630.10    

CDD

cd14473  FERM_B-lobe
cd12150  talin-RS

ProteinModelPortal

H9JV10   A0A0N0PCT8   A0A194PR75   A0A2H1WD21   A0A2A4JNG9   A0A2W1BLD3   + More
V5GXZ8   A0A1W4XBC3   U4U8Q8   A0A2G8JSL3   N6TI33   A0A087ZS13   A0A2A4JH17   A0A2H1VDQ4   E9JDA6   H9IVT9   A0A194PUE4   A0A194RIG4   A0A212FBU1   A0A1Y1LQD1   A0A1Y1LTW5   A0A182SD41   B7QM86   A0A0J7N8L8   A0A1Y1LRW5   J9JL63   A0A023GL65   A0A0S7HVU1   A0A1B6JKU4   A0A3S2NVB7   A0A131XZA4   V5IGE5   A0A0T6B1I5   A0A2S2NRS5   A0A1B6LJF3   V8PGR1   A0A2S2Q9F0   A0A2H8TJ46   A0A1A8J134   A0A212ETY4   A0A0S7JTA8   J9JU67   A0A182G5T2   A0A0L7LBG8   A0A023EVD0   A0A0S7JRK9   A0A1B6DNY2   A0A1B6BY27   Q176Z3   A0A2S2QV01   A0A0N8ERZ1   A0A139WG31   A0A182GR91   A0A2S2QWT8   A0A182QWM8   A0A0N0BGM5   Q3TN69   A0A2R5L7U9   A0A1E1XFD7   A0A154PRL0   A0A088AEI6   A0A131YGH8   A0A023EXJ4   A0A0S7HSH9   A0A3Q0IRT6   A0A3Q0ILZ7   A0A182I3A2   A0A182X3R7   Q7QJE3   A0A182TPN4   A0A182VF85   A0A182NHV9   A0A131XED9   A0A182PQF6   A0A131YM95   A0A224Z8Y2   L7MJY0   U6D3Q8   L7MJ63   S9X2E8   A0A0P5ZBF3   A0A0P6D242   A0A0P5VNJ7   A0A0P5BES2   A0A1B6GUN1   A0A0P5T638   A0A0P5AHK5   A0A0P5DTM4   A0A0N8DG33   M7B480   A0A151WI83   H3B1D1   A0A2K5S708   A0A1C7CZI8   A0A0P5AHI7   H9GDK3   A0A0P5C9D6   A0A1U7T365   A0A0P5BNV1   A0A2A3E5U7  

PDB

3G9W     E-value=4.14303e-21,     Score=243

KEGG

NA   

GO

GO:0005856   GO:0007016   GO:0051015   GO:0005200   GO:0005925   GO:0007155   GO:0001726   GO:0003677   GO:0005634   GO:0003779   GO:0016021   GO:0043231   GO:0048268   GO:0035615   GO:0035091   GO:0030276   GO:0032051   GO:0043325   GO:0007015   GO:0080025   GO:0030479   GO:0048260   GO:0008483   GO:0016712   GO:0005506   GO:0020037  

PANTHER

PTHR10407  

Subcellular location

Nucleus  

Length:

109

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00204

Exp number, first 60 AAs:

0.00204

Total prob of N-in:

0.44942

outside

1  -  109

 

 

Pi

336.257104

Theta

175.51074

Tajima's D

2.888496

CLR

0.030206

CSRT

0.974051297435128

Interpretation

Uncertain