Gene

KWMTBOMO15881

Pre Gene Modal

BGIBMGA013371

Annotation

PREDICTED:_uncharacterized_protein_LOC106136529_[Amyelois_transitella]

Location

Bomo_Chr27(+):648432-649707      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.342

CDS

ATGTTCCGCGACAAGACTGACGTGACATTAATAAGCTTAGTGAAGCAAAACCCTGTTTTATACGACTACAACAATCCCAAATACATGGATTTTAACGCCCGTGAAGTAACATGGCAGAAGATCGGCGACGAACTAAAGAGACCGGCTGTCGACTGCAAAATTAGATGGATAAACATAAGAGACGTCCATAGGAGACTTTGGAAAAAGAGACTTTCAGATCCTAATAGATCGTCCAAACCCTACAAATATGAGTCACAAATGGCATTTATGAAGGCATTTTATAAAGACGTTGCCATCCCCCTGGACAGTGGTGACTGCGATTACGAAGAGAAAGACTATGATGAATGGGACAACGAATCAGGGCAGGAGCAACAAGAGAACAATAGTGATTCCTCCGATGAACCAATCAAGAAAGTTGCGCGGCGGCGTAAATCAAAAAGAAAGCAGGAAAAGTCATCTGACGAGGAGAAACCTACGACCTCCAACTTCGGCGATACTGGCGCCACTCCAGAACTCGACCCCGCTGACCCGGTTGACGCATTCCTCATCAGCATAGCATCAACATTAAAGACTTTCTCACCCTATCATTTGAATTTAGCAAAGAGCAAAATTTTTGCCGTAGTCCAGGAACACGACTTGGAGCAGATCATGCAGAAACAACCAAAAGATGTTAAGGTTTCATCTCACGATAATATGTTTTTGAATGAATAG

Protein

MFRDKTDVTLISLVKQNPVLYDYNNPKYMDFNAREVTWQKIGDELKRPAVDCKIRWINIRDVHRRLWKKRLSDPNRSSKPYKYESQMAFMKAFYKDVAIPLDSGDCDYEEKDYDEWDNESGQEQQENNSDSSDEPIKKVARRRKSKRKQEKSSDEEKPTTSNFGDTGATPELDPADPVDAFLISIASTLKTFSPYHLNLAKSKIFAVVQEHDLEQIMQKQPKDVKVSSHDNMFLNE

Uniprot

H9JV08   S4P3Z5   A0A2H1VCC0   A0A1E1VX84   A0A2A4JPK4   A0A1E1WQG9   + More
A0A2A4JNE2   A0A0L7LIM6   A0A194PPK6   A0A0N1I820   A0A212EU09   A0A3S2NS22   A0A2W1BAU3   A0A1E1W5G6   A0A194PQK6   I4DLH4   A0A2A4JNG9   A0A0N0PD44   A0A2H1VC84   A0A212ETX0   H9JV09   A0A0P4W0P8   J9LZD8   A0A067RB37   A0A1E1W7Y4   A0A1Y1KP39   A0A194PEG6   A0A0T6B4L3   A0A194QMR7   A0A2S2NS00   A0A2S2QXX2   A0A2H1W8L6   A0A026WC80   A0A194RP34   A0A1Y1NET4   A0A194QI07   A0A2S2QT08   N6TVC1   A0A194PW34   A0A2A4IZ15  

Pubmed

19121390    23622113    26227816    26354079    22118469    28756777    + More
22651552    24845553    28004739    24508170    23537049   

EMBL

BABH01037489    GAIX01006224    JAA86336.1    ODYU01001771    SOQ38436.1    GDQN01011724    + More
JAT79330.1    NWSH01000974    PCG73340.1    GDQN01001779    JAT89275.1    PCG73339.1    JTDY01000953    KOB75302.1    KQ459597    KPI95247.1    KQ460466    KPJ14607.1    AGBW02012523    OWR44941.1    RSAL01000002    RVE54935.1    KZ150183    PZC72482.1    GDQN01008831    JAT82223.1    KPI95248.1    AK402142    BAM18764.1    PCG73326.1    KPJ14606.1    SOQ38437.1    OWR44940.1    GDRN01081732    JAI61954.1    ABLF02015438    KK852766    KDR16971.1    GDQN01007948    JAT83106.1    GEZM01082115    JAV61425.1    KQ459606    KPI91662.1    LJIG01009919    KRT82117.1    KQ461198    KPJ06255.1    GGMR01007239    MBY19858.1    GGMS01013310    MBY82513.1    ODYU01007041    SOQ49439.1    KK107323    EZA52639.1    KQ459984    KPJ19070.1    GEZM01004998    JAV96259.1    KQ458793    KPJ05029.1    GGMS01011661    MBY80864.1    APGK01016947    KB739995    KB632071    ENN81998.1    ERL88548.1    KQ459590    KPI97208.1    NWSH01005204    PCG64353.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000053240    UP000007151    + More
UP000283053    UP000007819    UP000027135    UP000053097    UP000019118    UP000030742   

PRIDE

H9JV08    H9JV09   

Pfam

PF10545   MADF_DNA_bdg        + More
PF02944   BESS
PF09379   FERM_N
PF16511   FERM_f0
PF00373   FERM_M

Interpro

IPR039353   TF_Adf1        + More
IPR006578   MADF-dom       
IPR004210   BESS_motif       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR019749   Band_41_domain       
IPR035963   FERM_2       
IPR018979   FERM_N       
IPR030224   Sla2_fam       
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR032425   FERM_f0       
IPR019748   FERM_central       
IPR011993   PH-like_dom_sf       
IPR001005   SANT/Myb       
IPR017877   Myb-like_dom       

SUPFAM

SSF47031   SSF47031        + More
SSF54236   SSF54236       

Gene 3D

1.20.80.10     2.30.29.30    

CDD

cd14473  FERM_B-lobe
cd00167  SANT

ProteinModelPortal

H9JV08   S4P3Z5   A0A2H1VCC0   A0A1E1VX84   A0A2A4JPK4   A0A1E1WQG9   + More
A0A2A4JNE2   A0A0L7LIM6   A0A194PPK6   A0A0N1I820   A0A212EU09   A0A3S2NS22   A0A2W1BAU3   A0A1E1W5G6   A0A194PQK6   I4DLH4   A0A2A4JNG9   A0A0N0PD44   A0A2H1VC84   A0A212ETX0   H9JV09   A0A0P4W0P8   J9LZD8   A0A067RB37   A0A1E1W7Y4   A0A1Y1KP39   A0A194PEG6   A0A0T6B4L3   A0A194QMR7   A0A2S2NS00   A0A2S2QXX2   A0A2H1W8L6   A0A026WC80   A0A194RP34   A0A1Y1NET4   A0A194QI07   A0A2S2QT08   N6TVC1   A0A194PW34   A0A2A4IZ15  

KEGG

101746761    no KO assigned | (RefSeq) uncharacterized LOC101746761

GO

GO:0003677   GO:0005856   GO:0005634   GO:0051015   GO:0016021   GO:0004965   GO:0005891   GO:0043565   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR12243   PTHR10407  

Subcellular location

Nucleus  

Length:

236

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0079

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10311

outside

1  -  236

 

 

Pi

149.044977

Theta

142.170884

Tajima's D

0.151949

CLR

30.773648

CSRT

0.417679116044198

Interpretation

Uncertain