Gene

KWMTBOMO15880

Pre Gene Modal

BGIBMGA013370

Annotation

PREDICTED:_talin-2-like_[Bombyx_mori]

Location

Bomo_Chr27(+):643762-645188      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.905

CDS

ATGGAAGACGAGAAAGTCGAGAATAAGCCACGGTCTACCGGGACGCTGACTGCGAAGACACTTCAGTCTGGTCGCGACGCGCAGTTTGAGGAACTCAGCAAGAAGCTCCACACTGATGATAATGTCAAATGGCTCGACCACCACAAGACGCTTCGGGAGCTGTCCTTGGACGAGACCACGCCGTTCCTGCTGAAGAGGAAACTCTTCTACTCTGACAAGAACGTGGACGAAAGAGACCCGATGCAGCTCAATCTTCTCTACTTGCAAACCAGAGATGCAATACTCAACTTGACTCATCCGGTCACCGAAAAAGAAGGTGAGTTTTAA

Protein

MEDEKVENKPRSTGTLTAKTLQSGRDAQFEELSKKLHTDDNVKWLDHHKTLRELSLDETTPFLLKRKLFYSDKNVDERDPMQLNLLYLQTRDAILNLTHPVTEKEGEF

Uniprot

H9JV07   A0A1E1WHW2   A0A2W1BI91   A0A2H1VCC0   A0A1B6GVJ0   B7QM86   + More
A0A1B6JKU4   A0A194PR75   V5GXZ8   A0A131XZA4   V5IGE5   A0A0N0PCT8   A0A1B6LJF3   A0A2A4JNE2   A0A1B6EM01   A0A1E1XFD7   A0A131YM95   A0A224Z8Y2   L7MJ63   L7MJY0   E9JDA6   A0A1W4XBC3   A0A131YGH8   A0A131XED9   A0A023GL65   A0A182SD41   H3C8Y1   A0A0S7L004   A0A2J7RK34   A0A1B6DNY2   A0A0P4W2W4   A0A212ETY4   A0A0P4W4Y4   A0A1B6BY27   A0A067R9F3   A0A0J7N8L8   A0A139WG31   A0A1Y1LTW5   A0A1Y1LRW5   A0A2P8Z921   A0A1Y1LQD1   A0A0S7KYX7   A0A2H1W5P8   A0A3P9P7K0   T1HTR5   A0A224XHD1   A0A069DY96   A0A2R5L7U9   H3BZC5   A0A1A8J134   S4RP70   A0A2R7W2L1   A0A0S7KYD2   A0A3B5QMV5   A0A0N0BGM5   A0A154PRL0   A0A158NZ32   W4VRP8   M3Z9X6   E9FVY2   A0A151WI83   Q6DEN1   A0A195BL13   A0A0N8P0V5   A0A0R3P6Z0   A0A158NZ33   Q4T143   Q568S4   A0A226EGS2   A1L1Z3   A0A3Q0IRT6   A0A3Q0ILZ7   A0A060Y5X6   Q3TKJ2   A0A2A3E5U7   A0A182X3R7   A0A182G5T2   A0A182I3A2   A0A182GR91   A0A182TPN4   Q7QJE3   Q176Z3   A0A182XYV8   A0A182RSM9   A0A3L8DYI0   A0A026WLW5   A0A0J9UH86   M9PF06   A0A182PQF6   A0A0R1DV89   A0A0Q5U2V2   A0A0N8ERZ1   W5MYM0   A0A182VF85   A0A3P8YN67   A0A195FSV9   F4WFN5   A0A2S2QV01   A0A1S3MAI4   A0A1S3MB54  

Pubmed

19121390    28756777    26354079    25765539    28503490    26830274    + More
28797301    25576852    21282665    28049606    15496914    22118469    24845553    18362917    19820115    28004739    29403074    26334808    23542700    21347285    21292972    17994087    15632085    24755649    10349636    11042159    11076861    11217851    12466851    16141073    26483478    12364791    17510324    25244985    30249741    24508170    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    26999592    25069045    21719571   

EMBL

BABH01037489    GDQN01004547    JAT86507.1    KZ150183    PZC72480.1    ODYU01001771    + More
SOQ38436.1    GECZ01003328    JAS66441.1    ABJB010002632    ABJB010062123    ABJB010379358    ABJB010428970    ABJB010506374    ABJB010562744    ABJB010575441    ABJB010633491    ABJB010781916    ABJB010798695    DS969850    EEC19958.1    GECU01007852    JAS99854.1    KQ459597    KPI95249.1    GALX01003213    JAB65253.1    GEFM01003222    JAP72574.1    GANP01006827    JAB77641.1    KQ460466    KPJ14605.1    GEBQ01016146    JAT23831.1    NWSH01000974    PCG73339.1    GECZ01030847    JAS38922.1    GFAC01001233    JAT97955.1    GEDV01008164    JAP80393.1    GFPF01012237    MAA23383.1    GACK01001711    JAA63323.1    GACK01001466    JAA63568.1    GL771866    EFZ09348.1    GEDV01011536    JAP77021.1    GEFH01003634    JAP64947.1    GBBM01000771    JAC34647.1    GBYX01192628    GBYX01192624    GBYX01192623    GBYX01192620    JAO82251.1    NEVH01002981    PNF41181.1    GEDC01019901    GEDC01009902    GEDC01003946    JAS17397.1    JAS27396.1    JAS33352.1    GDRN01089357    JAI60682.1    AGBW02012523    OWR44939.1    GDRN01089358    JAI60681.1    GEDC01031369    GEDC01020851    GEDC01015209    JAS05929.1    JAS16447.1    JAS22089.1    KK852657    KDR19212.1    LBMM01008317    KMQ88985.1    KQ971351    KYB26811.1    GEZM01051359    GEZM01051357    JAV75016.1    GEZM01051360    GEZM01051358    JAV75010.1    PYGN01000142    PSN52989.1    GEZM01051361    JAV75008.1    GBYX01192625    GBYX01192621    JAO82249.1    ODYU01006474    SOQ48343.1    ACPB03000518    ACPB03000519    GFTR01008985    JAW07441.1    GBGD01000014    JAC88875.1    GGLE01001409    MBY05535.1    HAED01015993    SBR02438.1    KK854264    PTY13912.1    GBYX01192626    GBYX01192622    JAO82248.1    KQ435782    KOX74764.1    KQ435087    KZC14531.1    ADTU01004540    ADTU01004541    ADTU01004542    GANO01000813    JAB59058.1    GL732525    EFX88629.1    KQ983089    KYQ47547.1    BC077078    AAH77078.1    KQ976444    KYM86235.1    CH902618    KPU78180.1    CH379067    KRT07357.1    CAAE01010725    CAF93389.1    BC092742    AAH92742.1    LNIX01000004    OXA56480.1    BC129276    AAI29277.1    FR907704    CDQ87146.1    AK166970    BAE39153.1    KZ288358    PBC27080.1    JXUM01043900    KQ561380    KXJ78773.1    APCN01000204    JXUM01082049    JXUM01082050    JXUM01082051    KQ563286    KXJ74128.1    AAAB01008807    EAA04618.3    CH477380    EAT42216.1    QOIP01000003    RLU24868.1    KK107161    EZA56621.1    CM002912    KMY98410.1    AE014296    AGB94284.1    CM000159    KRK00985.1    CH954178    KQS43439.1    GDUN01000922    JAN94997.1    AHAT01013409    KQ981276    KYN43533.1    GL888120    EGI67012.1    GGMS01012351    MBY81554.1   

Proteomes

UP000005204    UP000001555    UP000053268    UP000053240    UP000218220    UP000192223    + More
UP000075901    UP000007303    UP000235965    UP000007151    UP000027135    UP000036403    UP000007266    UP000245037    UP000242638    UP000015103    UP000245300    UP000002852    UP000053105    UP000076502    UP000005205    UP000001073    UP000000305    UP000075809    UP000078540    UP000007801    UP000001819    UP000198287    UP000079169    UP000193380    UP000242457    UP000076407    UP000069940    UP000249989    UP000075840    UP000075902    UP000007062    UP000008820    UP000076408    UP000075900    UP000279307    UP000053097    UP000000803    UP000075885    UP000002282    UP000008711    UP000018468    UP000075903    UP000265140    UP000078541    UP000007755    UP000087266   

PRIDE

H9JV07    B7QM86    V5IGE5    L7MJ63    L7MJY0    Q3TKJ2    + More
M9PF06   

Pfam

PF09379   FERM_N        + More
PF16511   FERM_f0
PF00373   FERM_M
PF10545   MADF_DNA_bdg
PF02944   BESS
PF01608   I_LWEQ
PF08913   VBS
PF09141   Talin_middle
PF02174   IRS
PF01044   Vinculin

Interpro

IPR018979   FERM_N        + More
IPR030224   Sla2_fam       
IPR029071   Ubiquitin-like_domsf       
IPR000299   FERM_domain       
IPR014352   FERM/acyl-CoA-bd_prot_sf       
IPR032425   FERM_f0       
IPR019748   FERM_central       
IPR035963   FERM_2       
IPR019749   Band_41_domain       
IPR037843   Kindlin/fermitin       
IPR006578   MADF-dom       
IPR004210   BESS_motif       
IPR019747   FERM_CS       
IPR002558   ILWEQ_dom       
IPR037438   Talin1/2-RS       
IPR015009   Vinculin-bd_dom       
IPR011993   PH-like_dom_sf       
IPR036723   Alpha-catenin/vinculin-like_sf       
IPR035964   I/LWEQ_dom_sf       
IPR015224   Talin_cent       
IPR036476   Talin_cent_sf       
IPR002404   IRS_PTB       
IPR006077   Vinculin/catenin       

SUPFAM

SSF54236   SSF54236        + More
SSF47031   SSF47031       
SSF109880   SSF109880       
SSF47220   SSF47220       
SSF109885   SSF109885       

Gene 3D

1.20.80.10     2.30.29.30    

CDD

cd14473  FERM_B-lobe
cd12150  talin-RS

ProteinModelPortal

H9JV07   A0A1E1WHW2   A0A2W1BI91   A0A2H1VCC0   A0A1B6GVJ0   B7QM86   + More
A0A1B6JKU4   A0A194PR75   V5GXZ8   A0A131XZA4   V5IGE5   A0A0N0PCT8   A0A1B6LJF3   A0A2A4JNE2   A0A1B6EM01   A0A1E1XFD7   A0A131YM95   A0A224Z8Y2   L7MJ63   L7MJY0   E9JDA6   A0A1W4XBC3   A0A131YGH8   A0A131XED9   A0A023GL65   A0A182SD41   H3C8Y1   A0A0S7L004   A0A2J7RK34   A0A1B6DNY2   A0A0P4W2W4   A0A212ETY4   A0A0P4W4Y4   A0A1B6BY27   A0A067R9F3   A0A0J7N8L8   A0A139WG31   A0A1Y1LTW5   A0A1Y1LRW5   A0A2P8Z921   A0A1Y1LQD1   A0A0S7KYX7   A0A2H1W5P8   A0A3P9P7K0   T1HTR5   A0A224XHD1   A0A069DY96   A0A2R5L7U9   H3BZC5   A0A1A8J134   S4RP70   A0A2R7W2L1   A0A0S7KYD2   A0A3B5QMV5   A0A0N0BGM5   A0A154PRL0   A0A158NZ32   W4VRP8   M3Z9X6   E9FVY2   A0A151WI83   Q6DEN1   A0A195BL13   A0A0N8P0V5   A0A0R3P6Z0   A0A158NZ33   Q4T143   Q568S4   A0A226EGS2   A1L1Z3   A0A3Q0IRT6   A0A3Q0ILZ7   A0A060Y5X6   Q3TKJ2   A0A2A3E5U7   A0A182X3R7   A0A182G5T2   A0A182I3A2   A0A182GR91   A0A182TPN4   Q7QJE3   Q176Z3   A0A182XYV8   A0A182RSM9   A0A3L8DYI0   A0A026WLW5   A0A0J9UH86   M9PF06   A0A182PQF6   A0A0R1DV89   A0A0Q5U2V2   A0A0N8ERZ1   W5MYM0   A0A182VF85   A0A3P8YN67   A0A195FSV9   F4WFN5   A0A2S2QV01   A0A1S3MAI4   A0A1S3MB54  

PDB

3IVF     E-value=6.70946e-18,     Score=215

KEGG

101736136    no KO assigned | (RefSeq) talin-2-like

GO

GO:0005856   GO:0003677   GO:0007016   GO:0051015   GO:0007155   GO:0005925   GO:0001726   GO:0005200   GO:0003779   GO:0043231   GO:0048268   GO:0035615   GO:0035091   GO:0030276   GO:0032051   GO:0043325   GO:0007015   GO:0080025   GO:0030479   GO:0048260   GO:0016021   GO:0014033   GO:0048703   GO:0055013   GO:0007519   GO:0045214   GO:0061386   GO:0007390   GO:0033627   GO:0007475   GO:0086042   GO:0007298   GO:0035160   GO:0045892   GO:0005178   GO:0016203   GO:0007526   GO:0004965   GO:0005891   GO:0043565   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR10407   PTHR16160  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0002

Exp number, first 60 AAs:

0

Total prob of N-in:

0.31499

outside

1  -  108

 

 

Pi

137.497782

Theta

141.730401

Tajima's D

0.2531

CLR

7.110675

CSRT

0.44312784360782

Interpretation

Uncertain