Gene

KWMTBOMO15869  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013365

Annotation

PREDICTED:_ubiquitin-conjugating_enzyme_E2_H_[Papilio_xuthus]

Location

Bomo_Chr27(+):372272-383579      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.257

CDS

ATGTCGTCACCGAGCGCTGGGAAACGACGCATGGACACCGATGTCATCAAACTTATCGAAAGCAAGCACGAAGTGACAATCCTGAGCGGCCTTAACGAGTTCTGCGTGAAATTCTTCGGACCTCCAGGAACGCCATACGAAGGTGGTGTGTGGAGAGTACGCGTGCACCTTCCCGATCATTACCCCTTCAAGTCTCCGTCCATCGGTTTCATGAATAAGGTCTACCACCCCAACATAGATGAGGTGTCGGGGACCGTGTGTCTTGACGTCATCAACCAGGCGTGGACTGCCCTTTATGACTTATCGAATATATTTGAATCGTTTCTGCCGCAACTGCTCACCTACCCGAACCCGATCGACCCGCTGAACGGTGACGCGGCCGCCATGTACCTGCACAAGCCCGAGGAGTACAAGAAAAAAGTCTGTGACTACGTTCGTAAGTTCGCCACAGAAGAAGCGTTGCTAGAGAAAGACGCGATAACAGGGGTCGGGGCCAGCGCCAACAAGGCGAGCAACGGCAACGACTCGGACTCGGAGTCCTCGATGAGCGACTTCAGCGAAGACGAGGCGCACGACATGGAGTTATAA

Protein

MSSPSAGKRRMDTDVIKLIESKHEVTILSGLNEFCVKFFGPPGTPYEGGVWRVRVHLPDHYPFKSPSIGFMNKVYHPNIDEVSGTVCLDVINQAWTALYDLSNIFESFLPQLLTYPNPIDPLNGDAAAMYLHKPEEYKKKVCDYVRKFATEEALLEKDAITGVGASANKASNGNDSDSESSMSDFSEDEAHDMEL

Similarity

Belongs to the ubiquitin-conjugating enzyme family.

Uniprot

S4PTB9   A0A0N0PD47   A0A194PR65   A0A212F4Q8   H9JV02   A0A182MT04   + More
A0A336MID9   A0A1L8DT58   T1DIU6   A0A1B2JLU0   Q7PJL8   Q16IK4   A0A023EI18   A0A1B0CE20   A0A0P4WSG9   A0A1Q3F750   B0X669   A0A182RVV7   A0A182W629   D6W7E1   T1E851   A0A2M3ZAA3   A0A2M4APX3   A0A2M4C1C0   W5JUJ7   A0A182FIF4   E9GC08   U5EVC3   A0A084VLF9   A0A1B6M029   K7IZ61   A0A151IW19   A0A158NQT8   A0A3L8DT57   A0A0N7Z9D0   A0A023F5S6   A0A069DPZ3   A0A0T6AX10   N6UDW0   A0A1Y1LHU8   A0A2H1WDG1   A0A1W4XC23   A0A182J0U0   A0A1B6D8D9   A0A088A5K1   A0A0P5E9C2   U4UKR2   A0A0C9RWC3   J9HZ17   A0A0A9W455   A0A0P6I4S7   T1JIH6   A0A1J1IF08   A0A1E1XR00   A0A2P2I5G7   A0A1Q3F6Z8   A0A0P6AS15   T1IBM8   A0A087TLE3   E0W350   A0A224Z4X5   A0A131Z0B2   A0A131XP29   A0A131XYG5   A0A1J1IST2   A0A023GEY3   A0A1E1WZ22   A0A182FED6   T1E834   A0A2M3Z6U3   A0A2M4AMZ5   W5JQX9   A0A0B6ZQN9   T1KGF1   A0A2C9L1F9   B7PGU4   A0A2M4C0Y6   A0A3B3ZHR3   A0A0L8IDX8   A0A0K8TNF7   A0A3Q2E1W6   A0A3B3WD93   A0A0S7KUW5   A0A3B5QGN4   A0A087XC00   A0A3B3W1L3   A0A3P9N877   A0A147B5A9   A0A2H8TJC1   J9K9P1   A0A2S2P3S8   A0A2S2Q9H3   A0A3Q3VV56   A0A3B4YWS1   A0A3B4H1Y9   A0A3B5B1C0   A0A3Q2Y3G4   A0A3Q3CMG3   A0A3Q3LRA7   A0A3Q1IV61  

Pubmed

23622113    26354079    22118469    19121390    24330624    12364791    + More
14747013    17210077    17510324    24945155    26483478    18362917    19820115    20920257    23761445    21292972    24438588    20075255    21347285    30249741    27129103    25474469    26334808    23537049    28004739    25401762    26823975    29209593    20566863    28797301    26830274    28049606    28503490    15562597    25463417    26369729    23542700   

EMBL

GAIX01012308    JAA80252.1    KQ460466    KPJ14616.1    KQ459597    KPI95239.1    + More
AGBW02010326    OWR48714.1    BABH01037460    BABH01037461    AXCM01005472    UFQS01001384    UFQT01001042    UFQT01001384    SSX10637.1    SSX28603.1    GFDF01004432    JAV09652.1    GALA01000746    JAA94106.1    KU870456    ANZ80585.1    AAAB01008975    EAA43707.1    CH478072    EAT34103.1    JXUM01104670    JXUM01104671    JXUM01104672    JXUM01104673    JXUM01104674    GAPW01004871    JAC08727.1    AJWK01008509    AJWK01008510    AJWK01008511    AJWK01008512    GDRN01065371    JAI64699.1    GFDL01011712    JAV23333.1    DS232404    EDS41219.1    KQ971307    EFA11211.1    GAMD01003068    JAA98522.1    GGFM01004654    MBW25405.1    GGFK01009337    MBW42658.1    GGFJ01009810    MBW58951.1    ADMH02000457    GGFL01004307    ETN66409.1    MBW68485.1    GL732538    EFX83065.1    GANO01001096    JAB58775.1    ATLV01014489    KE524974    KFB38803.1    GEBQ01010733    JAT29244.1    KQ980874    KYN12051.1    ADTU01023595    ADTU01023596    ADTU01023597    ADTU01023598    ADTU01023599    ADTU01023600    ADTU01023601    QOIP01000004    RLU23482.1    GDKW01000891    JAI55704.1    GBBI01002182    JAC16530.1    GBGD01003133    JAC85756.1    LJIG01022614    KRT79622.1    APGK01039128    KB740967    ENN76847.1    GEZM01057119    JAV72438.1    ODYU01007597    SOQ50514.1    GEDC01015357    GEDC01008642    GEDC01002109    GEDC01001813    GEDC01001658    JAS21941.1    JAS28656.1    JAS35189.1    JAS35485.1    JAS35640.1    GDIP01144711    LRGB01002860    JAJ78691.1    KZS05789.1    KB632399    ERL94664.1    GBYB01012085    GBYB01012086    GBYB01012087    JAG81852.1    JAG81853.1    JAG81854.1    CH477485    EJY57730.1    GBHO01043989    GBRD01016381    GDHC01021095    JAF99614.1    JAG49445.1    JAP97533.1    GDIQ01016963    JAN77774.1    JH431661    CVRI01000047    CRK97582.1    GFAA01001697    JAU01738.1    IACF01003661    LAB69272.1    GFDL01011710    JAV23335.1    GDIP01031450    JAM72265.1    ACPB03006465    KK115749    KFM65932.1    DS235882    EEB20056.1    GFPF01013099    MAA24245.1    GEDV01004651    JAP83906.1    GEFH01000701    JAP67880.1    GEFM01004636    JAP71160.1    CVRI01000059    CRL03263.1    GBBM01002772    JAC32646.1    GFAC01006956    JAT92232.1    GAMD01003098    JAA98492.1    GGFM01003474    MBW24225.1    GGFK01008845    MBW42166.1    ADMH02000689    GGFL01004515    ETN65310.1    MBW68693.1    HACG01023847    CEK70712.1    CAEY01000065    ABJB010274751    DS709658    EEC05816.1    GGFJ01009803    MBW58944.1    KQ415992    KOF99255.1    GDAI01001676    JAI15927.1    GBYX01196026    JAO81076.1    AYCK01010141    GCES01000406    JAR85917.1    GFXV01002334    MBW14139.1    ABLF02032906    GGMR01010927    MBY23546.1    GGMS01005185    MBY74388.1   

Proteomes

UP000053240    UP000053268    UP000007151    UP000005204    UP000075883    UP000007062    + More
UP000008820    UP000069940    UP000092461    UP000002320    UP000075900    UP000075920    UP000007266    UP000000673    UP000069272    UP000000305    UP000030765    UP000002358    UP000078492    UP000005205    UP000279307    UP000019118    UP000192223    UP000075880    UP000005203    UP000076858    UP000030742    UP000183832    UP000015103    UP000054359    UP000009046    UP000015104    UP000076420    UP000001555    UP000261520    UP000053454    UP000265020    UP000261480    UP000002852    UP000028760    UP000261500    UP000242638    UP000265000    UP000007819    UP000261620    UP000261360    UP000261460    UP000261400    UP000264820    UP000264840    UP000261640    UP000265040   

PRIDE

H9JV02    B7PGU4   

Pfam

PF00179   UQ_con

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR023313   UBQ-conjugating_AS       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

S4PTB9   A0A0N0PD47   A0A194PR65   A0A212F4Q8   H9JV02   A0A182MT04   + More
A0A336MID9   A0A1L8DT58   T1DIU6   A0A1B2JLU0   Q7PJL8   Q16IK4   A0A023EI18   A0A1B0CE20   A0A0P4WSG9   A0A1Q3F750   B0X669   A0A182RVV7   A0A182W629   D6W7E1   T1E851   A0A2M3ZAA3   A0A2M4APX3   A0A2M4C1C0   W5JUJ7   A0A182FIF4   E9GC08   U5EVC3   A0A084VLF9   A0A1B6M029   K7IZ61   A0A151IW19   A0A158NQT8   A0A3L8DT57   A0A0N7Z9D0   A0A023F5S6   A0A069DPZ3   A0A0T6AX10   N6UDW0   A0A1Y1LHU8   A0A2H1WDG1   A0A1W4XC23   A0A182J0U0   A0A1B6D8D9   A0A088A5K1   A0A0P5E9C2   U4UKR2   A0A0C9RWC3   J9HZ17   A0A0A9W455   A0A0P6I4S7   T1JIH6   A0A1J1IF08   A0A1E1XR00   A0A2P2I5G7   A0A1Q3F6Z8   A0A0P6AS15   T1IBM8   A0A087TLE3   E0W350   A0A224Z4X5   A0A131Z0B2   A0A131XP29   A0A131XYG5   A0A1J1IST2   A0A023GEY3   A0A1E1WZ22   A0A182FED6   T1E834   A0A2M3Z6U3   A0A2M4AMZ5   W5JQX9   A0A0B6ZQN9   T1KGF1   A0A2C9L1F9   B7PGU4   A0A2M4C0Y6   A0A3B3ZHR3   A0A0L8IDX8   A0A0K8TNF7   A0A3Q2E1W6   A0A3B3WD93   A0A0S7KUW5   A0A3B5QGN4   A0A087XC00   A0A3B3W1L3   A0A3P9N877   A0A147B5A9   A0A2H8TJC1   J9K9P1   A0A2S2P3S8   A0A2S2Q9H3   A0A3Q3VV56   A0A3B4YWS1   A0A3B4H1Y9   A0A3B5B1C0   A0A3Q2Y3G4   A0A3Q3CMG3   A0A3Q3LRA7   A0A3Q1IV61  

PDB

2Z5D     E-value=5.07973e-78,     Score=737

KEGG

101746104    K10576 ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 H

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0016740   GO:0061631   GO:0006511   GO:0016021   GO:0016874  

Length:

195

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00328

Exp number, first 60 AAs:

0.00077

Total prob of N-in:

0.15363

outside

1  -  195

 

 

Pi

396.796895

Theta

32.954859

Tajima's D

-1.128096

CLR

447.906313

CSRT

0.116394180290985

Interpretation

Uncertain