Gene

KWMTBOMO15848

Pre Gene Modal

BGIBMGA000061

Annotation

PREDICTED:_39S_ribosomal_protein_L35?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr26(+):11386473-11387304      View in EpiBrowser

Full name

50S ribosomal protein L35       + More
39S ribosomal protein L35, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 4.089

CDS

ATGCTGCGTTTTTTAAGTACTGCTGTTCGCTATGCTCGATGTCTTCCGGCTTCGCCCTTACACAATGCAATTACGCTTACTACTAAAGATGTCAGACATTTCTCAGCCTTTAAGAATATAGAGATACAACCTAGATCCTTGTTACCTCAAAATTCACTTCTAGCCAACAAACAAATATTGGACATTTTAATGAAAATTGATTTTACCCCAACAAGATCGGTTATAAAGTTTAGTTTAAAAAAAGGCAAAAGGAAAACAGTAAAGGCTGTTATCAAGCGATTTTTTAGACTGCACTGGGGTGGCTGGATTCGGACTAAAATTGGAAGGCACAAGAAATTATGGAAGAAATCATCTGCAAATAAAAGGAGGCTAAGGCAACATGTGTTCTGTAACTCTACACAAAACACTTTACTTGATAAAATGGTGACGAAATACTGGAAGAGACCTAAGCATTATGTAGAAGACCCTTATGCTCCATATCACACCCGTGAAGAATTTCACTTCACAAGAAAACAACCTATACAGAAATAA

Protein

MLRFLSTAVRYARCLPASPLHNAITLTTKDVRHFSAFKNIEIQPRSLLPQNSLLANKQILDILMKIDFTPTRSVIKFSLKKGKRKTVKAVIKRFFRLHWGGWIRTKIGRHKKLWKKSSANKRRLRQHVFCNSTQNTLLDKMVTKYWKRPKHYVEDPYAPYHTREEFHFTRKQPIQK

Similarity

Belongs to the bacterial ribosomal protein bL35 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  39S ribosomal protein L35, mitochondrial

Uniprot

H9IS35   A0A2H1V8B4   A0A2W1BHJ7   I4DKL8   I4DP60   A0A182RQN6   + More
A0A182WEL3   A0A084WQ21   A0A182JC18   A0A1S4H834   A0A182LNU8   Q7PYY1   A0A182HN29   A0A182M211   A0A182UUX6   A0A1Q3F8V8   A0A182MXL0   A0A2M3ZBT2   A0A2M3ZBV7   A0A182Q683   A0A1Q3F8I7   W5JDZ0   A0A2M4C1M9   T1DQH3   A0A2M4C0M8   A0A2M4C0Q9   A0A2M4AUX5   A0A0V0G7I9   A0A023EIM6   A0A2M4ATG5   A0A2A3EDH7   A0A2M4AT93   K7JJC6   A0A088ASM8   A0A0P4VLK2   R4G4F2   U5EQL9   A0A069DPK1   A0A2J7QJI8   A0A151IFQ0   B4G642   A0A158P0N2   Q29AP5   A0A2H8TQ24   B4K6K8   A0A154PQZ0   A0A1J1HGN4   J9K7H9   C4WT41   A0A0C9PM45   A0A232FMB0   A0A1B6IDF8   J3JUI9   N6T7X1   B4M0N5   A0A1W4VQ30   B4JRL3   A0A0M5J5B5   A0A0L0CNP2   A0A2P8ZJZ2   D6WZV7   A0A1A9Y100   B4QZC8   B4HM77   Q8MS27   A0A1I8M9K3   B4PLJ2   B3LVK8   B3P7P4   A0A1B0CS50   B4NHR0  

Pubmed

19121390    28756777    22651552    24438588    12364791    20966253    + More
20920257    23761445    24945155    20075255    27129103    26334808    17994087    21347285    15632085    28648823    22516182    23537049    26108605    29403074    18362917    19820115    10731132    12537572    12537569    25315136    17550304   

EMBL

BABH01035686    ODYU01001184    SOQ37049.1    KZ150122    PZC73164.1    AK401836    + More
BAM18458.1    AK403435    BAM19700.1    ATLV01025159    KE525370    KFB52315.1    AAAB01008986    EAA00046.3    APCN01001831    AXCM01002192    GFDL01011041    JAV24004.1    GGFM01005263    MBW26014.1    GGFM01005242    MBW25993.1    AXCN02001066    GFDL01011198    JAV23847.1    ADMH02001501    ETN62291.1    GGFJ01009737    MBW58878.1    GAMD01001155    JAB00436.1    GGFJ01009735    MBW58876.1    GGFJ01009736    MBW58877.1    GGFK01011191    MBW44512.1    GECL01002044    JAP04080.1    GAPW01004793    JAC08805.1    GGFK01010746    MBW44067.1    KZ288271    PBC29795.1    GGFK01010688    MBW44009.1    GDKW01001301    JAI55294.1    ACPB03020261    GAHY01001415    JAA76095.1    GANO01004181    JAB55690.1    GBGD01003134    JAC85755.1    NEVH01013553    PNF28761.1    KQ977800    KYM99577.1    CH479179    EDW23807.1    ADTU01001014    CM000070    EAL27304.2    GFXV01004489    MBW16294.1    CH933806    EDW16308.1    KQ435063    KZC14312.1    CVRI01000003    CRK87035.1    ABLF02013638    AK340455    BAH71061.1    GBYB01002158    JAG71925.1    NNAY01000022    OXU31864.1    GECU01022755    JAS84951.1    BT126903    AEE61865.1    APGK01048488    KB741112    ENN73803.1    CH940650    EDW67327.1    CH916373    EDV94403.1    CP012526    ALC47398.1    JRES01000142    KNC33871.1    PYGN01000034    PSN56813.1    KQ971372    EFA09638.1    CM000364    EDX13864.1    CH480815    EDW43125.1    AE014297    AY119133    CM000160    EDW97941.1    CH902617    EDV42578.1    CH954182    EDV54205.1    AJWK01025642    CH964272    EDW84670.1   

Proteomes

UP000005204    UP000075900    UP000075920    UP000030765    UP000075880    UP000075882    + More
UP000007062    UP000075840    UP000075883    UP000075903    UP000075884    UP000075886    UP000000673    UP000242457    UP000002358    UP000005203    UP000015103    UP000235965    UP000078542    UP000008744    UP000005205    UP000001819    UP000009192    UP000076502    UP000183832    UP000007819    UP000215335    UP000019118    UP000008792    UP000192221    UP000001070    UP000092553    UP000037069    UP000245037    UP000007266    UP000092443    UP000000304    UP000001292    UP000000803    UP000095301    UP000002282    UP000007801    UP000008711    UP000092461    UP000007798   

PRIDE

H9IS35    Q8MS27   

Pfam

PF01632   Ribosomal_L35p

Interpro

IPR037229   Ribosomal_L35_sf        + More
IPR021137   Ribosomal_L35       
IPR019338   Ribosomal-L35_mit       
IPR001706   Ribosomal_L35_non-mt       
IPR018265   Ribosomal_L35_CS       

SUPFAM

SSF143034   SSF143034       

ProteinModelPortal

H9IS35   A0A2H1V8B4   A0A2W1BHJ7   I4DKL8   I4DP60   A0A182RQN6   + More
A0A182WEL3   A0A084WQ21   A0A182JC18   A0A1S4H834   A0A182LNU8   Q7PYY1   A0A182HN29   A0A182M211   A0A182UUX6   A0A1Q3F8V8   A0A182MXL0   A0A2M3ZBT2   A0A2M3ZBV7   A0A182Q683   A0A1Q3F8I7   W5JDZ0   A0A2M4C1M9   T1DQH3   A0A2M4C0M8   A0A2M4C0Q9   A0A2M4AUX5   A0A0V0G7I9   A0A023EIM6   A0A2M4ATG5   A0A2A3EDH7   A0A2M4AT93   K7JJC6   A0A088ASM8   A0A0P4VLK2   R4G4F2   U5EQL9   A0A069DPK1   A0A2J7QJI8   A0A151IFQ0   B4G642   A0A158P0N2   Q29AP5   A0A2H8TQ24   B4K6K8   A0A154PQZ0   A0A1J1HGN4   J9K7H9   C4WT41   A0A0C9PM45   A0A232FMB0   A0A1B6IDF8   J3JUI9   N6T7X1   B4M0N5   A0A1W4VQ30   B4JRL3   A0A0M5J5B5   A0A0L0CNP2   A0A2P8ZJZ2   D6WZV7   A0A1A9Y100   B4QZC8   B4HM77   Q8MS27   A0A1I8M9K3   B4PLJ2   B3LVK8   B3P7P4   A0A1B0CS50   B4NHR0  

PDB

6NU3     E-value=4.36745e-27,     Score=297

KEGG

101742782    K02916 large subunit ribosomal protein L35 | (RefSeq) 39S ribosomal protein L35, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0003735   GO:0006412   GO:0005739   GO:0005762   GO:0032543   GO:0005622   GO:0005215   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR15909  

Subcellular location

Mitochondrion  

Length:

176

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00207

Exp number, first 60 AAs:

0.00103

Total prob of N-in:

0.11217

outside

1  -  176

 

 

Pi

189.305704

Theta

202.249805

Tajima's D

-0.201461

CLR

0

CSRT

0.317734113294335

Interpretation

Uncertain