SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15839
Pre Gene Modal
BGIBMGA000057
Annotation
hypothetical_protein_KGM_14251_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 1.879
 

Sequence

CDS
ATGGCGAACAACAGAATCCCTTCAGGACCTAACACTCCTGGCAGTCAGCAGACTCCCACACAGCAGGGAATCAAAATATTCATACAAAGAGACTATTCTGAAGGCACTGCAGTTAAATTCCAGACTAGATTCCCGCCTGAGCTTGAAGAAAGGATAGACAGACAAACCTTTGAACATACAATAGAGAGACTGAATGAGCACTTTGAAATGGCAGAGACAGCAGACTGCAGTACATATTGTGAGGGATGCCTTGCCTGTCTGACTGCCTACTTCATTTATATCTGTACAGAGACACATTATGAAAAGCATTTAAGGAAAGTCTCAAAATTCATAGCAACACAAAACGAAAGGGTATACAACCCCCGAGGTGTTCATATAACTGATCCCATTCTTCGCGGACTACGAGTCATTGAAATCACGATGATAGACGTACCCAACTGCCAGAGCCCGACAGGGAATAACACATCGATCCGACATACTTGA
Protein
MANNRIPSGPNTPGSQQTPTQQGIKIFIQRDYSEGTAVKFQTRFPPELEERIDRQTFEHTIERLNEHFEMAETADCSTYCEGCLACLTAYFIYICTETHYEKHLRKVSKFIATQNERVYNPRGVHITDPILRGLRVIEITMIDVPNCQSPTGNNTSIRHT

Summary

EMBL
BABH01035664    BABH01035665    NWSH01005798    PCG63941.1    ODYU01000846    SOQ36221.1    + More
KZ149905    PZC78366.1    AGBW02009573    OWR50402.1    KQ459717    KPJ20256.1    KQ459144    KPJ03620.1    GDQN01001439    JAT89615.1    CH478094    EAT33989.1    JXUM01139118    GAPW01005647    KQ568846    JAC07951.1    KXJ68862.1    GFDL01011795    JAV23250.1    DS231956    EDS28956.1    AXCN02001159    AXCM01008033    AAAB01008880    EAA08561.5    APCN01002573    ATLV01019871    KE525281    KFB44691.1    AXCP01003717    GGFK01011899    MBW45220.1    GGFJ01010392    MBW59533.1    ADMH02000440    ETN66476.1    GANO01002910    JAB56961.1    LJIG01022456    KRT80497.1    GFDF01003396    JAV10688.1    GFDF01003414    JAV10670.1    GEZM01051824    GEZM01051823    JAV74682.1    JR039081    AEY58520.1    GFDF01003397    JAV10687.1    GFDF01003398    JAV10686.1    KZ288271    PBC29815.1    GALX01000239    JAB68227.1    UFQS01000690    UFQT01000690    SSX06238.1    SSX26592.1    KQ435812    KOX72732.1    GDAI01002296    JAI15307.1    KQ971372    EFA10556.1    KQ414581    KOC71026.1    NNAY01000222    OXU29909.1    AJWK01022591    AJWK01022592    KK852720    KDR17757.1    GAKP01000282    JAC58670.1    GDHF01017867    JAI34447.1    GAMC01003266    JAC03290.1    GBXI01000798    JAD13494.1    GAKP01000283    JAC58669.1    KQ760549    OAD59891.1    JXJN01008560    CCAG010011760    EZ423261    ADD19537.1    CH940650    EDW67548.2    JRES01000718    KNC28991.1    GDKW01003452    JAI53143.1    GECL01000355    JAP05769.1    GBGD01003463    JAC85426.1    CH933806    EDW16681.2    KQ435092    KZC14617.1    GL439853    EFN66685.1    GL449414    EFN82778.1    GL766597    EFZ15010.1    LBMM01000974    KMQ97128.1    KK107019    EZA62797.1    GBHO01016456    GDHC01015759    JAG27148.1    JAQ02870.1    CH964232    EDW80827.2    GEBQ01009853    GEBQ01008645    JAT30124.1    JAT31332.1    GBRD01014980    JAG50846.1    QOIP01000007    RLU20956.1    KQ980859    KYN12135.1    KQ982944    KYQ49045.1    GEDC01025820    GEDC01006493    JAS11478.1    JAS30805.1    CH902617    EDV44236.2    GECZ01005846    JAS63923.1    GECU01031411    JAS76295.1    GL888207    EGI65108.1    CP012526    ALC45430.1    KQ976870    KYN07719.1    GFTR01002589    JAW13837.1    CH916377    EDV90531.1    CH480828    EDW45115.1    CH954182    EDV53545.1    AE014297    AY061563    AY071519    AAF56592.1    AAL29111.1    AAL49141.1    CM000160    EDW98627.2    AGB96366.1   
Pfam
PF10256   Erf4
Interpro
IPR019383   Golgin_A_7/ERF4       

Ontologies

Topology

Length:
160
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.29373
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12680
outside
1  -  160
 
 

Population Genetic Test Statistics

Pi
182.330127
Theta
160.613021
Tajima's D
0.39377
CLR
0
CSRT
0.484225788710564
Interpretation
Uncertain
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