SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15830
Pre Gene Modal
BGIBMGA000052
Annotation
PREDICTED:_uncharacterized_protein_LOC106130652_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.189
 

Sequence

CDS
ATGTTTATAAAATGCATCGTATTAGTGCTGTGCTGTGCTAAAATATCGATAGCCGTTATCGATGAAACGGAAGCCAATATAGTGAGTGAAGATGTCAAGAACCGAACCTCGGACAGGACCTCCAGGTCCGGCCTTAAAGAATGCACTAATCTACTCAGTGCTAAATGCTTGAAAATGCACGCTCTATCTTTCTTAGAAGACTTGAGCTCGCGAGAGGAACTGCATCTTCTGCCCGGATTGAGTATCATCAGAGAGAACCAGACTAATGCCACTACGGCCGAGGAAATAGCTGCTGAATTATCGAAGCAGTACCCAGGAAAACCTGAGGAGAAACTAAATAGGTTCTTGCTGTACCGTCTCCAAGACTACCTGGATGGGCACTCGTTGAAGTACAAATTGCTAGATCCTCAGACCACGAAGCAGGCTATGGATATGGCGAAAGGGGACCCGGAATCAATTGGAAGGAAATCCGGTGGTGGTGGTGGTGGGGGTGGCTTTGGAGGTGGTAAAGGCGGTGGCGGCGGAGCTCTTCTGGCTGCTGCTTTGATGATGAAAGCACACATGGGAGACAAGTACATTCAGGAGCGATACAACGGAGATACTATCATGGAAATTAAGACCAGCACCCCATAG
Protein
MFIKCIVLVLCCAKISIAVIDETEANIVSEDVKNRTSDRTSRSGLKECTNLLSAKCLKMHALSFLEDLSSREELHLLPGLSIIRENQTNATTAEEIAAELSKQYPGKPEEKLNRFLLYRLQDYLDGHSLKYKLLDPQTTKQAMDMAKGDPESIGRKSGGGGGGGGFGGGKGGGGGALLAAALMMKAHMGDKYIQERYNGDTIMEIKTSTP

Summary

Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.957903
 
 
Length:
210
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.96651
Exp number, first 60 AAs:
0.04232
Total prob of N-in:
0.03576
outside
1  -  210
 
 

Population Genetic Test Statistics

Pi
209.927096
Theta
162.337933
Tajima's D
0.921892
CLR
59.520312
CSRT
0.639018049097545
Interpretation
Uncertain
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