SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15827
Pre Gene Modal
BGIBMGA000049
Annotation
PREDICTED:_uncharacterized_protein_LOC105841625_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.361
 

Sequence

CDS
ATGGAAAGTGATGCTTGTAACATCACCAAAATGCTGCCAGTCTCCCGAGGCCTGATATTGGACAACAACAATTACAGTATTGTTAAAACTGAAACTATATTTGAATTCGCTCCGAAAAATCAAGATGACTACGCAAACAGATTTAATGTCACGGACCCTTATAGCTGGCTATTCACACAAGGCAAATTTGCTCCAAGATCGCTTCAAGAAGACTTAAATGCACCAAAAGAACTAACAAAAGATAAGCATGCAAGCAAGAAGATAAAAAAAGAAAAAACAAAAGAACATAAACGTAAAAGACGCGGCAAAGGAAAGAAATGCGTATTCAAAGTTTTGAAGAAAGGAAAAAGGAATAGAAAGAGGGGAAAGTATAAGATGCACAAAAAGTATGTGATGCCGGTAATTTTGGGGTTGTTGGCGGCGAAGAGTCTTTTAATACCCATAGCGTTGAAAGCTTTGGCATTCGTATCTGCTAAAGGTCTCATGATGGGCTTCTTCTCAACCGTCATGGCATCAGTTCTAAGTTTGAAAGGGATGTTTGAAAACTCGCACGCCTACCAAAATCGAAAGGACGATACGAAAACGCAAGTGGAAATCATTCAAGTGCCCACCAAGACCGAAGACCATGTCTACTACGACGAACATTACAGGAGGGGGGATCTTGCACCCCTCAATGCACCGCGAGATAACATCACTTGA
Protein
MESDACNITKMLPVSRGLILDNNNYSIVKTETIFEFAPKNQDDYANRFNVTDPYSWLFTQGKFAPRSLQEDLNAPKELTKDKHASKKIKKEKTKEHKRKRRGKGKKCVFKVLKKGKRNRKRGKYKMHKKYVMPVILGLLAAKSLLIPIALKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLNAPRDNIT

Summary

Uniprot
Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676       
ProteinModelPortal

Ontologies

Topology

Length:
232
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
41.01586
Exp number, first 60 AAs:
0.00026
Total prob of N-in:
0.99729
inside
1  -  129
TMhelix
130  -  149
outside
150  -  153
TMhelix
154  -  176
inside
177  -  232
 
 

Population Genetic Test Statistics

Pi
313.425511
Theta
228.351642
Tajima's D
1.098165
CLR
0
CSRT
0.684365781710914
Interpretation
Uncertain
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