SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15817  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000045
Annotation
osiris_9_[Danaus_plexippus]
Location in the cell
Mitochondrial   Reliability : 1.674
 

Sequence

CDS
ATGATTACAAATAGGGCCCAGATTAGATTTGGAGTTAGTCAGAATTCAGAAGGGATTATTTTAGGGCATATTACAAGTCCGCTGCGGCAGGTAGGTCGTGGTAAGAAGAAGGGAGGCGGCGCTATGGGCATCATCGGACTCCTAGCAGCCAAGATACTATTCGGAAAGCTGTTCATCGTCAAACTCCTAGCCCTCAAAGCATTAGCCACAGCGAAGATCGCCCTAGTACTAGCCGTTATTCTCTTCGTGGCCTGGTGCTTGAAACAAGATCATACCAAGACAACGTACGAGGTTGTACCCCACGCCTTGCATCACGAGAGCCATCACCCTCATGTGGAGCATGTCGCCCATGACGCGGGCCACGGCGGGTTCTCTGGATACGGTTCTGATTGGAGCAAGAACTCTGAGGACGCCCAGAATTTAGCATACAGTGGCTATACGCAGAAACACTAG
Protein
MITNRAQIRFGVSQNSEGIILGHITSPLRQVGRGKKKGGGAMGIIGLLAAKILFGKLFIVKLLALKALATAKIALVLAVILFVAWCLKQDHTKTTYEVVPHALHHESHHPHVEHVAHDAGHGGFSGYGSDWSKNSEDAQNLAYSGYTQKH

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
150
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.59752
Exp number, first 60 AAs:
21.81231
Total prob of N-in:
0.98843
POSSIBLE N-term signal
sequence
inside
1  -  37
TMhelix
38  -  60
outside
61  -  64
TMhelix
65  -  87
inside
88  -  150
 
 

Population Genetic Test Statistics

Pi
281.761065
Theta
193.059426
Tajima's D
1.450409
CLR
0.570492
CSRT
0.773261336933153
Interpretation
Uncertain
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