SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15812
Pre Gene Modal
BGIBMGA000040
Annotation
PREDICTED:_uncharacterized_protein_LOC106106446_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 1.876
 

Sequence

CDS
ATGTCTGGATTACTCATCGTCTTATTCATGGCGACACTGCAACTGTCCCGGTCAAATGTGACCGAAGATGGATATCTCCGGTACGTCAAGGACAGCTGCTTTGTTAAGGGAGAGGCTATTTCTTGTGTCAAGTACAAGGGCCTCAAAGTCATCAAGGAAACCTTTTTTGGAGATAACAACAACGAAACGATCAAGACAAACCTATTCAGTCTGGTCCCGTTAGATGTGGAAACCATCAACAGCTTGGGCGTGAAGAAAACAGTAAGGGACGTAAAACCAAGAGGATTCTTGTCTGAATGGGCCGAGTTTGCTAAATACTTGATGCGGCTGGTGCAGGACTTCCTGAACGTCAAAGGTCTGAAGGTGGAAATACCAGAGGGAGCCAGAACCGTGGAGGAGGAAACGGCTGATGATGGTCGTGGTAAAAAGAAGAAGTTGGCTGTTGTAATACCGCTGCTAACGTTGCTCGCTGTGATCAAGAGCAAGTTCTTGCTGCTTCCAATCCTGCTGGCAGTAATGCTAATCAAGAAGCTGCTGCTGGCAGCTGCTTTCCTCCTGCCGAATCTACTGAGCACATTAAAGGCTTGCAAACACCACTCCATGCCGCATTATTCCTACTTCGGCAGCTCCGATAGCAGCGACTTCAATTCGGACTACGGCAGCAGCTACGCCTACTCCTCGGGAGCAGGGGGAAAAGACTGGGCGTCTAACCGAGCGTATTCTCCAAAGAACAGGCCGTCACCAGCCCCTATGTACATCACAGCCCCGGGCGCTGTTGCTTAA
Protein
MSGLLIVLFMATLQLSRSNVTEDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVEEETADDGRGKKKKLAVVIPLLTLLAVIKSKFLLLPILLAVMLIKKLLLAAAFLLPNLLSTLKACKHHSMPHYSYFGSSDSSDFNSDYGSSYAYSSGAGGKDWASNRAYSPKNRPSPAPMYITAPGAVA

Summary

Pfam
PF07898   DUF1676
Interpro
IPR012464   DUF1676       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.993901
 
 
Length:
260
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.33351
Exp number, first 60 AAs:
0.16139
Total prob of N-in:
0.23157
outside
1  -  163
TMhelix
164  -  186
inside
187  -  260
 
 

Population Genetic Test Statistics

Pi
192.276643
Theta
148.820277
Tajima's D
1.280561
CLR
0.251016
CSRT
0.730063496825159
Interpretation
Uncertain
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