SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15798
Pre Gene Modal
BGIBMGA000027
Annotation
PREDICTED:_uncharacterized_protein_LOC106106449_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.782
 

Sequence

CDS
ATGGAGATGATCCAAGGTCCAGCTACTCACATGGGCTGTGGTGTCTCAGCTTACACAGAATACGCACATTACGACTCAAATCCGAATCTTATTTATAATTCAGTAGAAATAATCTGCAATTATTCGGCGAAACCACGCAAGGGACTACCGGTTTACAACACCACCCCACCAGAGAATCCTGCTTACAATGGCGCCTGCGGTTGCCCTGATGGCAGCATTGAAGATGACGACTGTCTTTGCAACCTTTCTGAGAAAGATAAAGAAGCTATACGCACGTGTGCCGACCCTGATTCGAACTGTGAACCAACAGTCGTGCTACTACCGATATTCAGCATTGAAGATGCGCCCCCCGAAAAGCTATTCACGCAAAGGGTAGTTGCAAACAATATCACTTTAAGACAAAGAGATTCAGTTGAGTTATTCAACAGCTTACAGAACACAGAGGAGTCTTTGATTAATTTGAATAACCGAGAGAGACATCTGCATAGAACAAAACTGAAAAGCTCACTCCAACGTAAGCCAATCAGAAAGCCCGTTGTTAAAAATCGGTACTTCAATCCAAAAAGCATCACAAAGGGCCAGTTTAAAAAAGGCGTTGCTTTGACCCACAAAAGGAAGCAAAGCATATTCGCTAAACAAGCCAAGTTTCAACTACCAACGATAAAAAATAAGATGACTCAAGCCAAGTCTAAAATAACGGACGTCATACCTCGTAAAGATTTCACACGAGCACAAAAGCTCGTTAAAAGCTACATAAGCGACAAACATCGTCCCTATTACGGCACTACAGAAAATAGACACAAAAACATTGTTGATCAGAATGATGTAAACCATAAAGAGCCCACAGAAGCCGTTTTAAAATCAGTCGAAGAAAGAGTTATGGATTACAATAAACATTTCGGTCCCGATACTGATAGTTTACAAGGTAATAAAAGTCCAAAAACAATTACTGAAGATTCAGACAATAAGCTGATGGTGATGCTAGATAATTTGGAAAGAGCAGTGAGGAATATAGAACTAGATGGAAAAGAAAAAGAGTTATTCGATGCCAAAATAAGAAAAATATACGGCACTGTTGTTGGTAAAGATGTTACTAATGTTGTACAACGTAAAGATATAACTGATTACGATTTCAACCAAAAGATCGATGCTGAAGTGGAAGGAAAGGGTCCTCCTGCAGAACTGGAATACAGACATAAACAAGATTACGGAGTTTCTAAAATTGATGTCAAAGACAACAAACATGACTACGATCGAAAATTAAATCCAAGGAAACAAAGTTCATTTGCTAGTTATCACAGAGAAAATATTAACGATTTTACTACAAAGGATGATTATTATGATTCTTTTTATGCCAAGCACAAAGCCAGCGCTCTTACACCGAGACACACCTTGAGAAACCACGAAGATAAGAGCATTTACAGAAAAGATAATTTGAGATTTACAAATGTGATGAGTGAAAGAAAAGTTAAAAGATTAGAAGACAGTCGTTATAACGATCCATTAAGCGTAGACAGGAGAAGGTTTTATCAAGAGAAATTAGAGAAAATGGAGAAGAAATTACGTGAAACTAAAAGCTATAAACATAGAAATGAGGGCAAGCTGTCGCTGCGACCGACCGAGGACCTGTCGAGGGGGAGTCGATCTAAAAGCCAAATCAATCCGTTCTACATGCACGACGGAGCAAGATACCTTCACTACTGA
Protein
MEMIQGPATHMGCGVSAYTEYAHYDSNPNLIYNSVEIICNYSAKPRKGLPVYNTTPPENPAYNGACGCPDGSIEDDDCLCNLSEKDKEAIRTCADPDSNCEPTVVLLPIFSIEDAPPEKLFTQRVVANNITLRQRDSVELFNSLQNTEESLINLNNRERHLHRTKLKSSLQRKPIRKPVVKNRYFNPKSITKGQFKKGVALTHKRKQSIFAKQAKFQLPTIKNKMTQAKSKITDVIPRKDFTRAQKLVKSYISDKHRPYYGTTENRHKNIVDQNDVNHKEPTEAVLKSVEERVMDYNKHFGPDTDSLQGNKSPKTITEDSDNKLMVMLDNLERAVRNIELDGKEKELFDAKIRKIYGTVVGKDVTNVVQRKDITDYDFNQKIDAEVEGKGPPAELEYRHKQDYGVSKIDVKDNKHDYDRKLNPRKQSSFASYHRENINDFTTKDDYYDSFYAKHKASALTPRHTLRNHEDKSIYRKDNLRFTNVMSERKVKRLEDSRYNDPLSVDRRRFYQEKLEKMEKKLRETKSYKHRNEGKLSLRPTEDLSRGSRSKSQINPFYMHDGARYLHY

Summary

Pfam
PF00188   CAP
Interpro
IPR001283   CRISP-related        + More
IPR035940   CAP_sf       
IPR014044   CAP_domain       
SUPFAM
SSF55797   SSF55797       
Gene 3D

Ontologies

GO

Topology

Length:
567
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00046
Exp number, first 60 AAs:
0.00046
Total prob of N-in:
0.00085
outside
1  -  567
 
 

Population Genetic Test Statistics

Pi
20.866763
Theta
18.173103
Tajima's D
0.421526
CLR
0.314695
CSRT
0.497275136243188
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号