SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15797  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000028
Annotation
PREDICTED:_uncharacterized_protein_LOC105390186_[Plutella_xylostella]
Location in the cell
Cytoplasmic   Reliability : 1.741
 

Sequence

CDS
ATGACGAGACTCAGCATAATAGCAATAGTGCTATGCCAGATATTGTGCTTGCAAATCCAGGGCGGGCACACCGAAGATGATAACCCTCTGCTGGATATCGCGTCGTCATTGCTCCAAAACATGGGCAATGGCGACAACAATGGCAACGGAATGGCGGCCATTGGAAGTATTATCGGAAACCTCATGCAGGGTGACAACGTTAAGAACTTGGCATCTTTATTTAACAATGAAAAAGAGGAAAAAGAAAAAGATAGCGGCAACATCGGAGATATTCTTTCAGGCTTAGGCAGTTTGATGGGCGGACAAGACGGAAAAATCGATCCAGCCATGATCGGAGGAATGATCTCGATGTTCGCCTCCATGGGTAGCACGCCTAAACGCGAGAAAAGGGAACAGAAAAAGGAAATAACCTTCGACAATTTAATGAACTTAGCATCGAGCTTCACGCAAAACAAAGAAGGCGGTAGCTACATGCCGCTAATCATGAGTGCTTTGAAAGGGTTCACGAAAATGGAAGCCGATAAGAAAGCCGACGAACACAAGGACCACGCATCCTTCCTGCCGCCGTACCTAGAAAAAGCGCATCTATACTGGGACATATTCATAAACTCCGAAGTCGGCAAACTGGTTTGGGAGAAAACCGGCATGAAGAAAATGTTCAAAGCCTTCACCGGCCCCGACGGGAAGATCAGCTTCGAAACTATGTTCAAGAACTTCGAGAATACGTCGTTCAGAAGACATTGGATTAAGGCCTCCGCCAAATATTTGACCGACATGGCTGTTCATGTGACGAAGCCTGAAGTATATAGGAGGTACATATCGATGGCGGAATACGTTATCAACTCGTTCATGGAGTCCCAAGGATTCCCTAACAGCATACAATTCAACGCCAAAGCTCCGGCTAAATCGCTAACGGCCATCATCAATTACCTTCTGAAGACTTACATGGACTTCGATGCTGACGTTACCGAGTACGTCGTCCCTGCGGTCGAATACGCCAAGCAAACGTTGAAGCTAGCGGAGAAGGCCGCCCAGTCTGTGGCCACCCGTGAAGACTACGCCGCCGTCAGCGACCGCCTCACGGACGCGCTCAACCTCGAGGTCATCGAGCCGGTGCTGCGGGTGTACCGCGCCTACCGGCACTCCGCCGCCGCGCCGCACTGCCAGGAGCACCTCATGTGTCTCGTCAACCGGCCGGAGGGCGACAGGAAAGGAGCCCCGGGTCTCAAAGCCGGACTGACGAAGCTCAGCAGCTTAGTGGCCTCCGCGGCCCTCAGCTTCCACGACGGAAAAGGATTCTGGGACCTCTACAACGCGATCCAGAGCGACGTCAATTGCGAGGCCGCCTACCCCGCCGACTGCTCCGCCTTCCACGAGCACGAACTCAGAGTCACCACGGAGCCCTACCACACTGAACTATAA
Protein
MTRLSIIAIVLCQILCLQIQGGHTEDDNPLLDIASSLLQNMGNGDNNGNGMAAIGSIIGNLMQGDNVKNLASLFNNEKEEKEKDSGNIGDILSGLGSLMGGQDGKIDPAMIGGMISMFASMGSTPKREKREQKKEITFDNLMNLASSFTQNKEGGSYMPLIMSALKGFTKMEADKKADEHKDHASFLPPYLEKAHLYWDIFINSEVGKLVWEKTGMKKMFKAFTGPDGKISFETMFKNFENTSFRRHWIKASAKYLTDMAVHVTKPEVYRRYISMAEYVINSFMESQGFPNSIQFNAKAPAKSLTAIINYLLKTYMDFDADVTEYVVPAVEYAKQTLKLAEKAAQSVATREDYAAVSDRLTDALNLEVIEPVLRVYRAYRHSAAAPHCQEHLMCLVNRPEGDRKGAPGLKAGLTKLSSLVASAALSFHDGKGFWDLYNAIQSDVNCEAAYPADCSAFHEHELRVTTEPYHTEL

Summary

EMBL
BABH01035561    ODYU01001334    SOQ37372.1    NWSH01001860    PCG69883.1    KZ150146    + More
PZC72889.1    AK402488    BAM19110.1    KQ461188    KPJ07309.1    AGBW02009344    OWR51058.1    KQ459144    KPJ03652.1    JTDY01005255    KOB67192.1    CVRI01000072    CRL07474.1    CH477308    EAT44020.1    CCAG010010758    JXUM01062409    JXUM01062410    JXUM01062411    JXUM01062412    KQ562198    KXJ76431.1    JRES01001482    KNC22533.1    UFQS01000283    UFQT01000283    SSX02400.1    SSX22775.1    GALX01004552    JAB63914.1    JXJN01007739    AE014297    AY051945    AAF54343.1    AAK93369.1    APCN01005395    AAAB01008898    EAA09114.4    GDHF01003874    JAI48440.1    OUUW01000005    SPP80165.1    CM000070    EAL26687.2    GAKP01013744    JAC45208.1    AXCM01001003    GDHF01028407    JAI23907.1    CH902617    EDV43310.1    CH954181    EDV49818.1    AXCN02001608    CP012526    ALC47388.1    CM000160    EDW96620.1    KRK03243.1    KRK03244.1    KRK03245.1    KRK03246.1    LBMM01001020    KMQ97055.1    CM000364    EDX13662.1    CH479186    EDW39166.1    ADMH02001987    ETN60078.1    CH964251    EDW83236.1    ATLV01024906    KE525364    KFB51995.1    CH916373    EDV94392.1    NEVH01020342    PNF21460.1    CH940650    EDW67337.1    CH933806    EDW16775.1    KK107323    QOIP01000002    EZA52559.1    RLU26175.1    GBXI01013550    JAD00742.1    KQ414940    KOC59235.1    KQ971372    EFA10266.1    ABLF02036082    GL442221    EFN63740.1    KZ288185    PBC34929.1    GGMR01007898    MBY20517.1    KQ982815    KYQ50216.1    KQ435180    KZC14971.1    KQ979685    KYN19774.1    KQ981606    KYN39488.1    ADTU01000542    KQ976423    KYM88890.1    GL762231    EFZ21778.1    GL888633    EGI58728.1    GL445463    EFN89546.1    GECU01005462    JAT02245.1    APGK01024354    APGK01024355    KB740544    KB632130    ENN80410.1    ERL88961.1    GGMS01004011    MBY73214.1    KQ977671    KYN00619.1    KC282411    AGX25168.1    KK852806    KDR16096.1    DS232261    EDS38649.1    PYGN01000005    PSN58281.1    AK417411    BAN20626.1    GEZM01062872    JAV69446.1    GDHF01021740    JAI30574.1   
Pfam
PF00415   RCC1
Interpro
IPR030445   H3-K79_meTrfase        + More
IPR009091   RCC1/BLIP-II       
IPR000408   Reg_chr_condens       
SUPFAM
SSF50985   SSF50985       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.994683
 
 
Length:
473
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.318370000000001
Exp number, first 60 AAs:
0.30172
Total prob of N-in:
0.01908
outside
1  -  473
 
 

Population Genetic Test Statistics

Pi
173.020846
Theta
21.369124
Tajima's D
-1.906638
CLR
0
CSRT
0.0186990650467477
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 ISFETMFK 100.00 3e-05
28556443 DHASFLPPYLEK 100.00 3e-05
28556443 IALDFATDQSER 100.00 0.001
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