Gene

KWMTBOMO15794

Pre Gene Modal

BGIBMGA000033

Annotation

PREDICTED:_rho-related_BTB_domain-containing_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr26(+):10245421-10256548      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.332

CDS

ATGGTGAGCAGCATGGGTGAGGCGCCAGCTGGTGATCTCGATGAAGATACAGAGCATTTACTCAAACAGGATATCATCAAACAAATGAGACTTTTAGATCAGATAAGACGTCGCTCTTCCTGTCAGATATTGCCACTGAGCGACGGTTGCAAGAAACCCCCCGATCTCTACAGGGAGGTCAATCACCCCGCCGTCAACTCGATAAGGGTTGTCAAGTGCGACAAATCTCAGCACGCCACATCGCAGACTCAAACGATAGCGACCATGAGTAAGCTCATCTCACAAAGGGTCATGCAGGAGATACTAAACTTCATTTACACCGGATCCATGCAATGCACTTCCGTGAAACGAGATTCCGGCACAGAAGATTATTCTGTAGCGCCTTCGACTCTCGGACTGATGCTGGAAATACGTCAAGCGTCTGAATTGCTCGGGATCCCGGAACTGACGAGAACCAGTCAACTGATCCTCACACAACAAATGCTGTATGATGAAGCGTTCCTTCTGCAATTCCACGTGTCAATCACGAGACGTTTCCGTGATATGTACGTCGAGCGTAACACATTCGCGGACGTGACTTTCGCCCTGGACGATGGCATACATTTGGCCCATCGCGCCATCCTGATGGCGAGGTGCGATCCCATGAAGGCAATGTTCCAAGGGCATTTCAGGGAAAGCAACTCCAGGGTGATATCGCTGCCAGGCGTGAAGATATACGCTTTCCACATCCTCCTCTGCTATATGTACACGGATAAGATACCGAGCGTCGAATCAGCAAGGTGCCTGGAGCTGCTGGAGCTGGCCAACAGATTTTGCATGAACCGTCTCGTCAATTTGGTGGAGTATAAAGTTATCGAAGAGTTAAGACATAAAGACAGAGTACGAGGACATGAAGATGAGGTTGTCGAAATAGCGTTATCCCTTTTGGAACCTGCTAAGTTGCACAACGCTCGCAATCTGTCGGATTGGTGCTTGTGGCGGCTGTGTGGCTCTTTCGACCGCGTGTGCCGCGACAAGACCCTCTCGCCCTCCGTGCGGGAGTACCTCGCCGAGAACCGGTGGCCTCCCGTCTGGTACGTCAAGGAATTCGATTACTATCAAAAGTGTTTGAGCGCGCAGTCGAAAGAGAAAAAAGAATTGGGTCCTACTACATCGTTACGCACGAGCCAACAGACTGGCTGTTTATGTTTTCCGAGTAAAGTAAGAAGATCTAGCGAAACCGTAGTGGAGACACGCGCTTTGTGCTCTGCCGTTGCTCTTCCAGTCCAGGAGCCGCCGATCTGA

Protein

MVSSMGEAPAGDLDEDTEHLLKQDIIKQMRLLDQIRRRSSCQILPLSDGCKKPPDLYREVNHPAVNSIRVVKCDKSQHATSQTQTIATMSKLISQRVMQEILNFIYTGSMQCTSVKRDSGTEDYSVAPSTLGLMLEIRQASELLGIPELTRTSQLILTQQMLYDEAFLLQFHVSITRRFRDMYVERNTFADVTFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCLELLELANRFCMNRLVNLVEYKVIEELRHKDRVRGHEDEVVEIALSLLEPAKLHNARNLSDWCLWRLCGSFDRVCRDKTLSPSVREYLAENRWPPVWYVKEFDYYQKCLSAQSKEKKELGPTTSLRTSQQTGCLCFPSKVRRSSETVVETRALCSAVALPVQEPPI

Uniprot

A0A194QFD4   A0A2A4JDM4   A0A3S2NJR1   A0A212FBE1   A0A2H1V968   A0A0N0PAL4   + More
A0A088ADH9   V9IB50   A0A3L8DYT0   A0A158NRQ5   A0A0C9S162   A0A232F667   A0A2A3EDJ8   A0A151IDA7   A0A154P1W4   E2BJW9   E9IAH5   A0A026WKQ9   A0A0M9A9T1   A0A310SIA9   A0A151WEK8   A0A195FH34   E2AUQ2   F4WJL0   A0A0C9RYS7   A0A195BDT0   A0A0L7RJG7   K7IUB5   A0A0J7L8D1   A0A1B6EFP5   A0A1Q3G4T5   A0A182UGR6   A0A182NJ17   A0A195EDR6   A0A182X921   A0A182JL30   A0A182Q319   A0A182PPG4   A0A182I459   A0A1B6D0I3   A0A182YFI6   A0A182M590   Q7Q5F0   A0A1L8DML6   A0A182LKV2   A0A182RR36   A0A182WC15   A0A1J1IWE1   A0A182FDY0   A0A2M4BFW5   A0A1Q3G4P4   A0A2M4A1H7   W5JG69   A0A2M3YYE0   A0A2M4A1A5   Q16FU0   A0A1Q3G4Q1   A0A2M3YYD2   T1I3P4   A0A146MA20   U5EWH4   Q17F37   A0A182H480   A0A1Q3G4P9   E0VA13   A0A0A1XFU8   A0A2W1BC97   A0A0A1X0E0   A0A0A1XTE9   A0A0J9RYV9   W8AS84   A0A023EZI0   A0A3B0JZ33   W8BQA2   A0A224X8D9   A0A0K8UXW8   A0A0K8VRY5   A0A034VMB4   A0A0J9RYQ7   A0A1W4W6L7   B4MLJ6   B4HBV6   M9PIB5   Q2LYJ2   B4IA94   B4QRY1   A0A0J9RYN2   B3NIK6   B3M984   A0A069DWP9   A0A067QTG6   A0A1W4VU14   B4PF97   Q9VPG7   Q7KJ62   B4LD64   A0A0Q5UKM7   M9PG08   B0WY87  

Pubmed

26354079    22118469    30249741    21347285    28648823    20798317    + More
21282665    24508170    21719571    20075255    25244985    12364791    14747013    17210077    20966253    20920257    23761445    17510324    26823975    26483478    20566863    25830018    28756777    22936249    24495485    25474469    25348373    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    26334808    24845553    17550304    26109357    26109356   

EMBL

KQ459144    KPJ03655.1    NWSH01001860    PCG69886.1    RSAL01000019    RVE52746.1    + More
AGBW02009344    OWR51061.1    ODYU01001334    SOQ37375.1    KQ461188    KPJ07310.1    JR037040    AEY57544.1    QOIP01000002    RLU25597.1    ADTU01000403    ADTU01000404    GBYB01014471    JAG84238.1    NNAY01000872    OXU26125.1    KZ288271    PBC29853.1    KQ977978    KYM98378.1    KQ434803    KZC05925.1    GL448708    EFN83978.1    GL762022    EFZ22424.1    KK107193    EZA55684.1    KQ435706    KOX80130.1    KQ760827    OAD58899.1    KQ983238    KYQ46221.1    KQ981606    KYN39547.1    GL442872    EFN62851.1    GL888184    EGI65626.1    GBYB01014475    JAG84242.1    KQ976509    KYM82713.1    KQ414581    KOC70979.1    AAZX01007296    LBMM01000261    KMR02521.1    GEDC01000541    JAS36757.1    GFDL01000269    JAV34776.1    KQ979039    KYN23348.1    AXCN02000460    APCN01002274    GEDC01018107    JAS19191.1    AXCM01005449    AAAB01008960    EAA11877.4    GFDF01006433    JAV07651.1    CVRI01000059    CRL03470.1    GGFJ01002776    MBW51917.1    GFDL01000270    JAV34775.1    GGFK01001326    MBW34647.1    ADMH02001489    ETN62333.1    GGFM01000510    MBW21261.1    GGFK01001273    MBW34594.1    CH478381    EAT33106.1    GFDL01000272    JAV34773.1    GGFM01000509    MBW21260.1    ACPB03021975    GDHC01003229    JAQ15400.1    GANO01001417    JAB58454.1    CH477277    EAT45094.1    JXUM01109046    JXUM01109047    JXUM01109048    JXUM01109049    JXUM01109050    GFDL01000268    JAV34777.1    DS235004    EEB10219.1    GBXI01004914    JAD09378.1    KZ150146    PZC72892.1    GBXI01009705    JAD04587.1    GBXI01000017    JAD14275.1    CM002912    KMZ00768.1    GAMC01014830    JAB91725.1    GBBI01004064    JAC14648.1    OUUW01000012    SPP87337.1    GAMC01014831    GAMC01014829    JAB91724.1    GFTR01007831    JAW08595.1    GDHF01020797    JAI31517.1    GDHF01010706    JAI41608.1    GAKP01016284    JAC42668.1    KMZ00769.1    CH963847    EDW72852.2    CH479267    EDW39550.1    AE014296    AGB94801.1    CH379069    EAL29870.3    CH480826    EDW44207.1    CM000363    EDX11227.1    KMZ00767.1    CH954178    EDV52502.1    CH902618    EDV40068.2    GBGD01000628    JAC88261.1    KK853292    KDR08853.1    CM000159    EDW95183.2    AF217287    AY051710    AAF44065.1    AAF51585.3    AAK93134.1    AF221547    AAF34654.1    CH940647    EDW69945.2    KQS44306.1    AGB94800.1    DS232185    EDS36964.1   

Proteomes

UP000053268    UP000218220    UP000283053    UP000007151    UP000053240    UP000005203    + More
UP000279307    UP000005205    UP000215335    UP000242457    UP000078542    UP000076502    UP000008237    UP000053097    UP000053105    UP000075809    UP000078541    UP000000311    UP000007755    UP000078540    UP000053825    UP000002358    UP000036403    UP000075902    UP000075884    UP000078492    UP000076407    UP000075880    UP000075886    UP000075885    UP000075840    UP000076408    UP000075883    UP000007062    UP000075882    UP000075900    UP000075920    UP000183832    UP000069272    UP000000673    UP000008820    UP000015103    UP000069940    UP000009046    UP000268350    UP000192221    UP000007798    UP000008744    UP000000803    UP000001819    UP000001292    UP000000304    UP000008711    UP000007801    UP000027135    UP000002282    UP000008792    UP000002320   

PRIDE

Q9VPG7    Q7KJ62   

Pfam

PF00071   Ras        + More
PF00651   BTB

Interpro

IPR027417   P-loop_NTPase        + More
IPR001806   Small_GTPase       
IPR000210   BTB/POZ_dom       
IPR011333   SKP1/BTB/POZ_sf       
IPR005225   Small_GTP-bd_dom       
IPR003578   Small_GTPase_Rho       

SUPFAM

SSF54695   SSF54695        + More
SSF52540   SSF52540       

ProteinModelPortal

A0A194QFD4   A0A2A4JDM4   A0A3S2NJR1   A0A212FBE1   A0A2H1V968   A0A0N0PAL4   + More
A0A088ADH9   V9IB50   A0A3L8DYT0   A0A158NRQ5   A0A0C9S162   A0A232F667   A0A2A3EDJ8   A0A151IDA7   A0A154P1W4   E2BJW9   E9IAH5   A0A026WKQ9   A0A0M9A9T1   A0A310SIA9   A0A151WEK8   A0A195FH34   E2AUQ2   F4WJL0   A0A0C9RYS7   A0A195BDT0   A0A0L7RJG7   K7IUB5   A0A0J7L8D1   A0A1B6EFP5   A0A1Q3G4T5   A0A182UGR6   A0A182NJ17   A0A195EDR6   A0A182X921   A0A182JL30   A0A182Q319   A0A182PPG4   A0A182I459   A0A1B6D0I3   A0A182YFI6   A0A182M590   Q7Q5F0   A0A1L8DML6   A0A182LKV2   A0A182RR36   A0A182WC15   A0A1J1IWE1   A0A182FDY0   A0A2M4BFW5   A0A1Q3G4P4   A0A2M4A1H7   W5JG69   A0A2M3YYE0   A0A2M4A1A5   Q16FU0   A0A1Q3G4Q1   A0A2M3YYD2   T1I3P4   A0A146MA20   U5EWH4   Q17F37   A0A182H480   A0A1Q3G4P9   E0VA13   A0A0A1XFU8   A0A2W1BC97   A0A0A1X0E0   A0A0A1XTE9   A0A0J9RYV9   W8AS84   A0A023EZI0   A0A3B0JZ33   W8BQA2   A0A224X8D9   A0A0K8UXW8   A0A0K8VRY5   A0A034VMB4   A0A0J9RYQ7   A0A1W4W6L7   B4MLJ6   B4HBV6   M9PIB5   Q2LYJ2   B4IA94   B4QRY1   A0A0J9RYN2   B3NIK6   B3M984   A0A069DWP9   A0A067QTG6   A0A1W4VU14   B4PF97   Q9VPG7   Q7KJ62   B4LD64   A0A0Q5UKM7   M9PG08   B0WY87  

PDB

3HTM     E-value=4.58582e-06,     Score=121

KEGG

105841626    K07868 Rho-related BTB domain-containing protein 1/2 | (RefSeq) rho-related BTB domain-containing pr

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0005525   GO:0007264   GO:0003924   GO:0016021   GO:0030838   GO:0005886   GO:0000902   GO:0007015   GO:0016477   GO:0043652   GO:0007266   GO:0005737   GO:0030036   GO:0019901   GO:0035011   GO:0005515   GO:0008270   GO:0005215   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

Length:

427

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0653

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00274

outside

1  -  427

 

 

Pi

188.838731

Theta

162.539766

Tajima's D

0.614382

CLR

0.930838

CSRT

0.547772611369432

Interpretation

Uncertain