SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15791
Pre Gene Modal
BGIBMGA014178
Annotation
beta-glucosidase_precursor_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.591
 

Sequence

CDS
ATGAATTTGTTGTTTGTGTTGTTGTGTCTTTCAACGATAGCGGTACGAAATGTCCGCGGCAAGAGCAAGGTGCGTTACTTCCCTGACTATTTCGAATTCGGCGCATCAACGGCTTCTTATCAGGTAGAAGGAGCGTGGGATGAGGATGGAAAGAGTTTGTCGATATGGGATGTAGCAGCTCACATGTCTCCGTCTCCTATCAAGGACGGAAGTACCGGCGACGTCGCGGCTGACTCATACCACTTGTACAAACGGGACGTGGAAATCATGAAGGAGCTTGGTCTGAACTTCTATCGTTTCTCCGTATCTTGGTCGAGGATTTTGCCAAGCGGTTTCGCCAATCAAATCAACCAGGCCGGCATAGATTATTACAATAATCTAATCAACGAAATGTTGGCGAACAACATTAAACCATTCTTGACGATTTACCATTGGGATTTGCCCCAAAGCTTCCAAGATTTGGGGGGCTGGGCCAACCCTATGATCGTAGATTGGTTTGTAGACTACGCTAAGGTTTTGTTCGAGAATTTTGGAGATAGGGTGAAATTTTGGATCTCTATAAATGAGCCCAAACAAATCTGCACCGAAGGTTATGGCACAGATAAAAAAGCTCCGATGGTCAACATGTCAGGAATAGCAGATTATATGTGTAACAAGAACGTCTTATTGGCACACGCTAAGACGTATAGACTTTATGATGAGATATACAGGAAGGATCAGAACGGCAGCGTAGGAATATCGATCAGTTGCACATGGTATGAGCCTGCTTCGGACTCAAATGATGATCAACAGGCAGCTGAGGATGCCAGAATCTTTGATTGGGGCCAGTACGTTCATGCTATATTCACAAAAGAAGGAGACTTCCCAGAACGAATAAAGAAGAACGTAGCATACAAGAGTGCTGAACAGGGGTACGCCAAATCTCGACTACCCGAACTATCAGTTGCCGAAGTGGACCTTATACGAGGATCATCAGACTTTTTCGGGTTGAACAGTTATACTTCAAAACTGGTTTATAGAGACGCATCTGTGGAGGGCATGTACGCCGTACCTTCATACATGGATGATTTAGGAGTTGTTATGGTGCCAGATCCTAACTGGCCCCAATCGCATTCAAGTTGGCTACAGGAAGTACCGTGGGGCTTCTATAAATTGTTCAAAGAGATACGGAATGTATACGGCAACCCTACTCTGTACGTAACAGAGAACGGCTGGTCCACTGACGCTGGTCTGATCGACGATGATCGAGTGCGATATTATAGGAACTATTTGAATGCGCTCTTGGACGCTATTGAAGAGGGCAGCGATATCAGGGGGTACACGGCCTGGTCTATGATCGACAACTTTGAATGGATGCAGGGTTACGCCGACAAATTCGGCCTCTACGAAGTTGACTTCACAAGCCCGGAACGTACGCGTACTCCAAGAAAATCCGCGTACATTTATAAAGAAATCGTGAGGACAAAATCATTGGATCCGGACTACGAACCGGAAATACTTCTAGATGCTACAAAGGAAAATTAG
Protein
MNLLFVLLCLSTIAVRNVRGKSKVRYFPDYFEFGASTASYQVEGAWDEDGKSLSIWDVAAHMSPSPIKDGSTGDVAADSYHLYKRDVEIMKELGLNFYRFSVSWSRILPSGFANQINQAGIDYYNNLINEMLANNIKPFLTIYHWDLPQSFQDLGGWANPMIVDWFVDYAKVLFENFGDRVKFWISINEPKQICTEGYGTDKKAPMVNMSGIADYMCNKNVLLAHAKTYRLYDEIYRKDQNGSVGISISCTWYEPASDSNDDQQAAEDARIFDWGQYVHAIFTKEGDFPERIKKNVAYKSAEQGYAKSRLPELSVAEVDLIRGSSDFFGLNSYTSKLVYRDASVEGMYAVPSYMDDLGVVMVPDPNWPQSHSSWLQEVPWGFYKLFKEIRNVYGNPTLYVTENGWSTDAGLIDDDRVRYYRNYLNALLDAIEEGSDIRGYTAWSMIDNFEWMQGYADKFGLYEVDFTSPERTRTPRKSAYIYKEIVRTKSLDPDYEPEILLDATKEN

Summary

Similarity
Belongs to the glycosyl hydrolase 1 family.
EMBL
BABH01035726    AGBW02009344    OWR51063.1    RSAL01000019    RVE52748.1    JN033718    + More
AEW46871.1    NWSH01001860    PCG69887.1    KZ150146    PZC72895.1    ODYU01004710    SOQ44881.1    KQ460779    KPJ12243.1    KQ459598    KPI94624.1    KPI94627.1    BABH01005438    KPJ12242.1    BABH01005437    AGBW02011758    OWR46180.1    JN033714    AEW46867.1    KPI94629.1    KPJ12245.1    NWSH01000819    PCG74065.1    ODYU01001971    SOQ38904.1    KPJ12247.1    KPJ12246.1    RSAL01000077    RVE48784.1    AGBW02008847    OWR52397.1    KPI94633.1    OWR52398.1    OWR46178.1    KPI94628.1    KPI94630.1    KPI94632.1    KPJ12248.1    KPJ12249.1    JTDY01001400    KOB73970.1    JN033728    AEW46881.1    KZ149936    PZC77129.1    NWSH01000883    PCG73725.1    ODYU01004903    SOQ45257.1    PCG73727.1    ODYU01006201    SOQ47841.1    BABH01016738    ODYU01011923    SOQ57942.1    KPJ12244.1    PCG73728.1    NWSH01000679    PCG74847.1    AF052729    AAC06038.1    JTDY01005139    KOB67338.1    PCG73724.1    KPI94631.1    PZC77128.1    KQ459601    KPI93700.1    BABH01020023    BABH01020024    KPI93701.1    KZ150738    PZC70347.1    ODYU01006202    SOQ47842.1    KQ459875    KPJ19634.1    PCG73726.1    KQ458761    KPJ05206.1    SOQ45256.1    AGBW02010585    OWR48224.1    KQ459589    KPI97521.1    PZC77127.1    KQ459993    KPJ18573.1    ODYU01004836    SOQ45125.1    OWR48225.1    JXUM01040976    KQ561266    KXJ79155.1    BABH01014157    NWSH01000598    PCG75431.1    APCN01002262    AAAB01008960    EAL40075.2    EAA44227.3    JXUM01031354    KQ560919    KXJ80350.1    JN033713    AEW46866.1    GFDL01002519    JAV32526.1    CH477568    EAT38908.1    GBUI01000004    JAI18231.1    JTDY01001063    KOB74989.1    AB073638    BAB91145.1    ADMH02000892    ETN64737.1    KXJ80351.1    JXUM01031352    KXJ80348.1    AXCN02000455    ETN64736.1    KP068696    AJE75667.1    JXUM01040978    KXJ79156.1    EAU76599.1    LT635663    SGZ49382.1   
Pfam
PF00232   Glyco_hydro_1        + More
PF07782   DC_STAMP
PF00335   Tetraspanin
Interpro
IPR033132   Glyco_hydro_1_N_CS        + More
IPR001360   Glyco_hydro_1       
IPR017853   Glycoside_hydrolase_SF       
IPR012858   DC_STAMP-like       
IPR018120   Glyco_hydro_1_AS       
IPR018499   Tetraspanin/Peripherin       
SUPFAM
SSF51445   SSF51445       
PDB
5CG0     E-value=1.30604e-157,     Score=1428

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.981142
 
 
Length:
507
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03341
Exp number, first 60 AAs:
0.03336
Total prob of N-in:
0.00198
outside
1  -  507
 
 

Population Genetic Test Statistics

Pi
183.834193
Theta
145.32851
Tajima's D
0.833609
CLR
0.50284
CSRT
0.611519424028799
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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