SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15783
Pre Gene Modal
BGIBMGA007859
Annotation
PREDICTED:_extensin-3-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.092 Nuclear   Reliability : 1.768
 

Sequence

CDS
ATGTATTTTGAAATCAACCCCCCACCTAGGGTATCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACCATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTACGCTCAACCCTCTACCTGGGGTATTTGAGCCTGACCTTCCACTATATTTTGAAATCGACCCTCCACCTAGGGTGTCATTCATTCCGCTCAACCCTCCACCTAGGGTATCCTCACTAGAGCCTGACCCTCCACCTAGGGAAGGTGACGCGGCAAGGGCCAAGCTGATGAAGGAACTCGAAGGGCTAATGAACGAGAGGGACGTGGTCGGAGCACAGCTGGTCCGGAGGAATGACGAGATCGCGCTACTGTACGAGAAGATTCGGATCTTAGAGGTCACGCTGCAACGGGGGGAAAGACAATACGAACAGAGAGTGGAGGATATAAGATTGCTGCGCTTGGAAATAATAAGACTTCGTAAGGAGAAGAATCTGTTGTCGAAGGGAATCGAGAACATGACGGACTTGAGGCTTGAGGTAAGTCGGCGGTTACAAGGAGATATGTGTTCTCTAACGTAA
Protein
MYFEINPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPPYFEIDPPPRVSFITLNPLPGVFEPDLPLYFEIDPPPRVSFIPLNPPPRVSSLEPDPPPREGDAARAKLMKELEGLMNERDVVGAQLVRRNDEIALLYEKIRILEVTLQRGERQYEQRVEDIRLLRLEIIRLRKEKNLLSKGIENMTDLRLEVSRRLQGDMCSLT

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
249
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
0.00034
Total prob of N-in:
0.01662
outside
1  -  249
 
 

Population Genetic Test Statistics

Pi
241.845058
Theta
166.737481
Tajima's D
1.632268
CLR
0.000045
CSRT
0.817559122043898
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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