Gene

KWMTBOMO15780  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002230

Annotation

PREDICTED:_macrophage_erythroblast_attacher_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr26(-):9822108-9832806      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.733

CDS

ATGAATGAGATCAAATCTATGGAGCATGCGACATTGAAGGTGCCGTATGAAGTGTTTAACAAGAAGTACCGCAGTGCTCAACGCGTCTTCGATGTTGAGGCGCGTCAGGTTAGCAGTGCCGCCACAGAAATGGAAACGGTCAAGAACCAACCCATCACAAATACAGAGATCGATAGTCTATTGGGTGGCATGGTCGAGAAGTTGACAACGATGAAGCGAAAAGCGAGCGAGGCTATTAACGAAGAGCTCCAGGTCGCTTACGTCTGCAAGAAGCGTCTGGAACACCTGAAGGAGCAGGCCAGCGCCCTCGCCGAGCCGTCCTCCACGCAGACGACGCTGAACCAATGGCGTAAAGTGCGTCTAGATCGGATGCTGGTTGACTACTTCCTGAGGAACGGTTACTACGAGTCCGCTTGGAAGCTGGCGGAATCCGCCGGCCTCAGGGAGCTCACCAATGTCGACATATACAGCGCGGCCGCCGCGGTGGAGGCCGAGCTGAAGAGCCAGAGGACGGCGCGCTGTCTGCAGTGGTGCTCCGGCAACAAGTCCAAGCTGAGGAAGCTGAACTCCACGATGGAGTTCAACATCAGGATACAGGAGTTCATAGAGCTGGTGCGCGAGGACCGGCGCCTGGAGGCCGTGCGTCACGCCAGGAAGCACTTCTCCAACCACGAGGAGGGGCAGCTGGTCGACATTCAGCACTGCATGGGCATGCTGGCCTTCCCCAAGGACACCGAGGTGGAGCCGTACCGGTCGCTGCTGGCGCGCGGGCGCTGGGCGCGGCTGGTGCGGCAGTTCCGCGCCGAGCACGCGCGCCTGCTGCACCCCGCGCCGCTGCCGCTGCTGCCCGCCACGCTGCAGCTGGGCCTGGCCGCGCTCAACACGCCTCAGTGCTACAAGGAGAGCAGCCAGGCGGCGGACTGCCCGGCGTGCCAGGCGCCGCTGTCGGGGCTGGCGAGGCAGCTGCCGCACGCGCACTGCTCGCACTCGCGCCTCGTGTGCCGCATCTCGCGCCTGCCGCTCAACGAGCACAACCAGCCCATGGTGCTGCCCAACGGACAGGTCTACGGGGAGAAGGCTCTGAAGCAAATGATGAAAGAGCACGGCTCGATCATCTGCCCGAAGACGAAAGAAGTGTTTTGCATGAAGCGCGTCGAGAAGGTGTACGTCATGTGA

Protein

MNEIKSMEHATLKVPYEVFNKKYRSAQRVFDVEARQVSSAATEMETVKNQPITNTEIDSLLGGMVEKLTTMKRKASEAINEELQVAYVCKKRLEHLKEQASALAEPSSTQTTLNQWRKVRLDRMLVDYFLRNGYYESAWKLAESAGLRELTNVDIYSAAAAVEAELKSQRTARCLQWCSGNKSKLRKLNSTMEFNIRIQEFIELVREDRRLEAVRHARKHFSNHEEGQLVDIQHCMGMLAFPKDTEVEPYRSLLARGRWARLVRQFRAEHARLLHPAPLPLLPATLQLGLAALNTPQCYKESSQAADCPACQAPLSGLARQLPHAHCSHSRLVCRISRLPLNEHNQPMVLPNGQVYGEKALKQMMKEHGSIICPKTKEVFCMKRVEKVYVM

Uniprot

H9IY97   A0A2H1W8V7   A0A0N0PAX5   A0A194QCJ8   A0A212ERE5   A0A2W1BCW0   + More
S4PSB4   A0A067RDP7   A0A1Y1M7W7   A0A2A3E3C1   A0A087ZWL6   A0A0A9YIX7   A0A1E1W327   A0A1B6DDF6   A0A0N0U6Q1   K7INK7   A0A232EU50   A0A2J7PI73   A0A1B6HZ13   A0A0C9QVP5   A0A154PK34   R4WSP4   V5GCP9   A0A0J7P3E8   E9J589   E2ATB5   F4WII5   A0A158NZY7   A0A026WZ02   E2BV49   A0A182ITR2   J9JUX8   B0WGR5   A0A2H8TTD1   A0A084WR10   A0A2R7VNQ3   A0A1B0GH92   A0A139WBG1   A0A1Q3FAE8   A0A182R8F0   A0A182NCM8   A0A182YJM6   A0A182W319   J3JVL4   A0A182M5W8   A0A182TLA1   A0A182LNG7   A0A182WUX8   Q7QAA4   A0A182HVH1   A0A182VLW2   A0A182QNF3   A0A182P3H3   A0A2M3Z6L2   A0A182F8G5   A0A2M4BQS0   U5EUR0   A0A182JYN9   W5JGL4   A0A2M4A651   A0A0V0G838   A0A069DSM1   A0A1L8DD38   E0VTJ6   A0A023ERD2   A0A182SIE8   A0A0N7Z9A5   A0A310S9I6   N6TMD8   U4U8D6   A0A195F2I0   A0A336L2P0   A0A151X3W8   A0A151J0M7   A0A195CLY2   A0A195BMZ5   Q17A38   A0A023FAK6   T1J0Z8   A0A0P4WFY6   A0A1S3HBA0   A0A0K8TQK5   A0A2P6KWP8   A0A182TI57   A0A0C9R9D4   A0A2S2NLA5   V5HE18   B7PXJ7   A0A0L0BN16   T1PB33   R7ULR9   A0A087V0E9   A0A1B0DQC3   A0A1L8EDL2   A0A1I8PW88   B4M0Q6   B3P6X9   B4QTT4   B4PV36   B4IJC6  

Pubmed

19121390    26354079    22118469    28756777    23622113    24845553    + More
28004739    25401762    26823975    20075255    28648823    23691247    21282665    20798317    21719571    21347285    24508170    30249741    24438588    18362917    19820115    25244985    22516182    20966253    12364791    14747013    17210077    20920257    23761445    26334808    20566863    24945155    27129103    23537049    17510324    25474469    26369729    25765539    26108605    25315136    23254933    17994087    17550304   

EMBL

BABH01020900    BABH01020901    ODYU01006953    SOQ49272.1    KQ461188    KPJ07321.1    + More
KQ459193    KPJ03144.1    AGBW02013027    OWR44068.1    KZ150129    PZC73079.1    GAIX01014003    JAA78557.1    KK852766    KDR16975.1    GEZM01037866    JAV81872.1    KZ288438    PBC25746.1    GBHO01010567    GBRD01008606    GDHC01002620    JAG33037.1    JAG57215.1    JAQ16009.1    GDQN01009684    JAT81370.1    GEDC01013589    JAS23709.1    KQ435721    KOX78524.1    NNAY01002170    OXU21883.1    NEVH01025129    PNF16028.1    GECU01027790    JAS79916.1    GBYB01004737    JAG74504.1    KQ434938    KZC12157.1    AK417732    BAN20947.1    GALX01000556    JAB67910.1    LBMM01000214    KMR04459.1    GL768124    EFZ12028.1    GL442548    EFN63282.1    GL888175    EGI66116.1    ADTU01005133    KK107063    QOIP01000005    EZA61257.1    RLU22639.1    GL450810    EFN80439.1    ABLF02024977    ABLF02024981    DS231928    EDS27141.1    GFXV01004653    MBW16458.1    ATLV01025875    KE525402    KFB52654.1    KK854007    PTY09167.1    AJWK01004085    KQ971372    KYB25256.1    GFDL01010553    JAV24492.1    BT127282    AEE62244.1    AXCM01000300    AAAB01008898    EAA09156.2    APCN01005777    AXCN02001183    GGFM01003415    MBW24166.1    GGFJ01006182    MBW55323.1    GANO01001357    JAB58514.1    ADMH02001252    ETN63502.1    GGFK01002889    MBW36210.1    GECL01002067    JAP04057.1    GBGD01001801    JAC87088.1    GFDF01009844    JAV04240.1    DS235767    EEB16723.1    GAPW01001858    JAC11740.1    GDKW01001091    JAI55504.1    KQ768431    OAD53171.1    APGK01018646    KB740081    ENN81629.1    KB632220    ERL90184.1    KQ981856    KYN34591.1    UFQS01000883    UFQT01000883    SSX07480.1    SSX27820.1    KQ982557    KYQ55107.1    KQ980624    KYN15034.1    KQ977580    KYN01718.1    KQ976440    KYM86554.1    CH477340    EAT43126.1    GBBI01000220    JAC18492.1    JH431742    GDRN01060114    JAI65429.1    GDAI01000956    JAI16647.1    MWRG01004217    PRD30732.1    GBYB01004735    JAG74502.1    GGMR01004937    MBY17556.1    GANP01002608    JAB81860.1    ABJB010800282    DS814574    EEC11319.1    JRES01001708    KNC20674.1    KA645904    AFP60533.1    AMQN01007212    KB300220    ELU07028.1    KK122591    KFM83088.1    AJVK01019041    GFDG01002100    JAV16699.1    CH940650    EDW67348.1    CH954182    EDV53799.1    CM000364    EDX14288.1    CM000160    EDW98885.1    CH480848    EDW51117.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000027135    UP000242457    + More
UP000005203    UP000053105    UP000002358    UP000215335    UP000235965    UP000076502    UP000036403    UP000000311    UP000007755    UP000005205    UP000053097    UP000279307    UP000008237    UP000075880    UP000007819    UP000002320    UP000030765    UP000092461    UP000007266    UP000075900    UP000075884    UP000076408    UP000075920    UP000075883    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000075903    UP000075886    UP000075885    UP000069272    UP000075881    UP000000673    UP000009046    UP000075901    UP000019118    UP000030742    UP000078541    UP000075809    UP000078492    UP000078542    UP000078540    UP000008820    UP000085678    UP000001555    UP000037069    UP000095301    UP000014760    UP000054359    UP000092462    UP000095300    UP000008792    UP000008711    UP000000304    UP000002282    UP000001292   

PRIDE

H9IY97    A0A087ZWL6   

Pfam

PF10607   CLTH

Interpro

IPR024964   CTLH/CRA        + More
IPR027714   Fyv10/EMP       
IPR006595   CTLH_C       
IPR013144   CRA_dom       
IPR006594   LisH       
IPR013083   Znf_RING/FYVE/PHD       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9IY97   A0A2H1W8V7   A0A0N0PAX5   A0A194QCJ8   A0A212ERE5   A0A2W1BCW0   + More
S4PSB4   A0A067RDP7   A0A1Y1M7W7   A0A2A3E3C1   A0A087ZWL6   A0A0A9YIX7   A0A1E1W327   A0A1B6DDF6   A0A0N0U6Q1   K7INK7   A0A232EU50   A0A2J7PI73   A0A1B6HZ13   A0A0C9QVP5   A0A154PK34   R4WSP4   V5GCP9   A0A0J7P3E8   E9J589   E2ATB5   F4WII5   A0A158NZY7   A0A026WZ02   E2BV49   A0A182ITR2   J9JUX8   B0WGR5   A0A2H8TTD1   A0A084WR10   A0A2R7VNQ3   A0A1B0GH92   A0A139WBG1   A0A1Q3FAE8   A0A182R8F0   A0A182NCM8   A0A182YJM6   A0A182W319   J3JVL4   A0A182M5W8   A0A182TLA1   A0A182LNG7   A0A182WUX8   Q7QAA4   A0A182HVH1   A0A182VLW2   A0A182QNF3   A0A182P3H3   A0A2M3Z6L2   A0A182F8G5   A0A2M4BQS0   U5EUR0   A0A182JYN9   W5JGL4   A0A2M4A651   A0A0V0G838   A0A069DSM1   A0A1L8DD38   E0VTJ6   A0A023ERD2   A0A182SIE8   A0A0N7Z9A5   A0A310S9I6   N6TMD8   U4U8D6   A0A195F2I0   A0A336L2P0   A0A151X3W8   A0A151J0M7   A0A195CLY2   A0A195BMZ5   Q17A38   A0A023FAK6   T1J0Z8   A0A0P4WFY6   A0A1S3HBA0   A0A0K8TQK5   A0A2P6KWP8   A0A182TI57   A0A0C9R9D4   A0A2S2NLA5   V5HE18   B7PXJ7   A0A0L0BN16   T1PB33   R7ULR9   A0A087V0E9   A0A1B0DQC3   A0A1L8EDL2   A0A1I8PW88   B4M0Q6   B3P6X9   B4QTT4   B4PV36   B4IJC6  

KEGG

101742668    K18624 macrophage erythroblast attacher | (RefSeq) macrophage erythroblast attacher

GO

GO:0045721   GO:0016567   GO:0043161   GO:0005634   GO:0043066   GO:0005737   GO:0034657   GO:0006511   GO:0016874   GO:0005515   GO:0030001   GO:0046873   GO:0008270   GO:0005215   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR12170:SF2  

Length:

391

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02646

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02182

outside

1  -  391

 

 

Pi

253.462276

Theta

179.333328

Tajima's D

1.293244

CLR

0.074111

CSRT

0.741962901854907

Interpretation

Uncertain