Gene

KWMTBOMO15778

Pre Gene Modal

BGIBMGA002231

Annotation

PREDICTED:_F-box/LRR-repeat_protein_2_isoform_X1_[Papilio_xuthus]

Location

Bomo_Chr26(-):9755501-9773346      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.043 Nuclear   Reliability : 1.016 PlasmaMembrane   Reliability : 1.526

CDS

ATGGATATTTCCACTGATGTGTGGGGCCAGCTGGCTTTAGAGGCCTCGCAAGTGTACCTGACCGAGGGAGGCCAAGTGCGGAGTCCATTCGCGAGCACGACCATCGAAAAACTTCCGGACAAGGTTTTATTGAACATTTTCTCGTATCTAACACACCGTGAGATATGTCGTATGGCAACTGTTTGCAGACGATGGAGGATGGTTGCGTACGACACGAAATTGTGGACGCACGTTAGTTTGAGGCCGGAAATATCAGGATTGCACGTTAGTTCTCTGGAATCACTGTTAGCGCTGATATCAATAAGATTTGGACCGTCGCTGCGTTATATAGAGCTTCCAATAGAGCTGATAACCCACACAGTCCTCCACGAGTTGGCAGCTAAATGTCCTAATTTGACACACATGCTTCTTGATTTTAGTACTGCGATGCAACTCCACGACTTTTCGGAAATGCAAGCCTTCCCGACGAAGCTCCGCTACCTGTGCATCTGTCTGTCCGAGGTCATCTTCATGGAGGGATTCATGCGAAAGATTTACAATTTCATAAACGGCCTAGAGATATTGCATCTAATAGGCACGTACGAGAAGGTCGAAGAGGAAGAGGAAGAGATATACGAAGTGATAAACGTTCACAAATTGAAATCGGCGACTCCCAACCTAAGAGTCATCAATTTGTACGGGATAAACTTTGTCGACGACTCGCATATCGACGCGTTCAGTTCGAACTGTATACAGTTGGAATGTTTGGCGGTGAACTTTTGCAACAAGGTTACGGGATCCACCATGAAGACCTTGTTCCAGCGCTCGCGAAGACTCACCTGTCTCCTGATGAACGGATGCAGTCTTCGATCCGACTACGTAATGCAAGTGGAGTGGGAGAAATCCTCCGTTCAGGAATTGGATTTGACCGCCACAGACTTGTCGACCGAGTGCCTGATAGACATGCTCACCCGGATACCGAACCTGCGCTTTCTGAGCGCCGGCCAAATCAACGGGTTCAATGACTCTGTACTTAAAGCTTGGGTGGAAGCTGGGACTGCTAGGAACCTGGTGGCGCTGGACGTGGACTCGTCGGACAACCTGTCGGACGAAGCGCTGCACCGCTTCCTGTCGCGGCACGGCTCGCAGCTGCACGGGCTGGTGCTGGGCGGGATGCCGCACATCACCGACCAGCTGTGGCAGAGCGTGCTGCAGCTGCTCAACAACGCTAAGATCCTTATAATGGGAACTCAGGAGCGTCTCGGGATCAACATTCACGTTGACCAGCTGATGGATGGCATTGCGAACAGCTGCCCTAACTTGGAGCGCCTGGAGCTGCGCTGGGACCCGGAGAACCTGCGCTTCAGCGACAAGAGCCAGAAGGCGATCGACATACTCCGCGTCAAGTGTTTGAAACTAAAATGTTTAGTGCTGAGCGACGGCCGGTACTACGAAATCGTGAAGGCTAACTTCGAGCGCGCCGATCGCACTACCGTGGTCAGAACTTCCACAAATTGCCGAGTCTCAAACTACTATCTACTTTCAAATTACAACGATCTCATATTCAATTAA

Protein

MDISTDVWGQLALEASQVYLTEGGQVRSPFASTTIEKLPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSLRPEISGLHVSSLESLLALISIRFGPSLRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLSEVIFMEGFMRKIYNFINGLEILHLIGTYEKVEEEEEEIYEVINVHKLKSATPNLRVINLYGINFVDDSHIDAFSSNCIQLECLAVNFCNKVTGSTMKTLFQRSRRLTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMGTQERLGINIHVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDILRVKCLKLKCLVLSDGRYYEIVKANFERADRTTVVRTSTNCRVSNYYLLSNYNDLIFN

Uniprot

A0A2H1WQZ6   A0A2A4JDP1   A0A212EPC4   A0A2W1BFN9   H9IY98   E2CA99   + More
A0A3S2NJS1   A0A0L7RBZ1   A0A088A816   A0A194QCF4   E2AVV5   A0A195FWK0   A0A1B6C1M8   A0A158P0Q2   A0A151WVY3   A0A195B1C0   A0A0C9R6S8   A0A0A9WKL7   A0A1B6IFQ1   A0A0A9WVT6   A0A023EX09   A0A1B6EYZ2   A0A1I8MTL9   A0A1B6LV92   A0A0K8UWI7   A0A1I8P024   W8BKK1   N6TY79   T1I131   A0A034VK39   A0A0Q9WT44   A0A0P9A327   Q9VAK7   Q8IGU5   B3P5H0   A0A0R1E918   A0A1W4UGZ1   A0A3B0KB20   I5AMY9   A0A158P0Q1   A0A0Q9W0G2   A0A3L8DCD5   A0A026VUZ1   A0A1J1J2U6   A0A1B6E1F8   A0A0C9PMU1   A0A151JAX4   J9K3Y1   A0A1B6HH84   A0A1B6D3M2   A0A2S2QHB7   A0A1B6HVJ8   A0A0C9QG95   A0A1B6H4G6   A0A1B6HL94   A0A2J7PUE0   A0A1W4WGB8   A0A224XP34   A0A182K0V3   A0A182UWF4   A0A182TNV3   A0A182WVJ4   A0A182KXT5   F5HLD8   A0A139WBR6   Q16RX7   B0WFD7   A0A182HE74   A0A182RBA0   A0A182NCH1   W8BW65   A0A0K8W989   A0A0A1XJW4   A0A1Y1N7E9   A0A1I8MTM0   A0A182YG40   T1PH57   A0A182F9K8   A0A1A9XTG5   A0A1B0BMI1   A0A182MC83   A0A067RRI1   W5JEQ4   A0A084VEN5   A0A1I8P004   A0A034VLQ8   A0A1I8NZZ7   A0A1J1J5X4   A0A0Q9WZ71   Q8T0K1   A0A2A3ENM2   B3MTE6   B4NBH6   A0A1A9WPN2   B4R044   B4HZA2   B4PQ29   A0A1W4U616   E9IYJ5   A0A182I973  

Pubmed

22118469    28756777    19121390    20798317    26354079    21347285    + More
25401762    26823975    25474469    25315136    24495485    23537049    25348373    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15632085    30249741    24508170    20966253    12364791    14747013    17210077    18362917    19820115    17510324    26483478    25830018    28004739    25244985    24845553    20920257    23761445    24438588    26109357    26109356    21282665   

EMBL

ODYU01010376    SOQ55448.1    NWSH01002164    NWSH01001833    PCG69010.1    PCG69959.1    + More
AGBW02013496    OWR43326.1    KZ150129    PZC73081.1    BABH01020894    BABH01020895    BABH01020896    BABH01020897    GL453952    EFN75148.1    RSAL01000019    RVE52759.1    KQ414617    KOC68281.1    KQ459193    KPJ03147.1    GL443213    EFN62377.1    KQ981200    KYN45045.1    GEDC01029897    JAS07401.1    ADTU01005714    ADTU01005715    KQ982691    KYQ52030.1    KQ976667    KYM78261.1    GBYB01002466    JAG72233.1    GBHO01034617    GBHO01013411    GBRD01016125    GDHC01015916    JAG08987.1    JAG30193.1    JAG49701.1    JAQ02713.1    GECU01021955    GECU01001683    JAS85751.1    JAT06024.1    GBHO01034629    GBHO01013409    GBRD01016126    GDHC01003350    JAG08975.1    JAG30195.1    JAG49700.1    JAQ15279.1    GBBI01005025    JAC13687.1    GECZ01026503    GECZ01015390    JAS43266.1    JAS54379.1    GEBQ01012412    JAT27565.1    GDHF01021270    JAI31044.1    GAMC01009042    GAMC01009038    JAB97513.1    APGK01050349    KB741169    KB632203    ENN73336.1    ERL90065.1    ACPB03016231    GAKP01016465    JAC42487.1    CH964232    KRF99397.1    CH902623    KPU72917.1    AE014297    AAF56899.2    BT001595    AAN71350.1    CH954182    EDV53220.1    CM000160    KRK04193.1    OUUW01000007    SPP82866.1    CM000070    EIM52324.1    CH940652    KRF78618.1    QOIP01000010    RLU17991.1    KK108837    EZA46619.1    CVRI01000066    CRL06290.1    GEDC01005543    JAS31755.1    GBYB01002463    JAG72230.1    KQ979203    KYN22266.1    ABLF02039910    GECU01036927    GECU01033660    JAS70779.1    JAS74046.1    GEDC01028345    GEDC01017006    JAS08953.1    JAS20292.1    GGMS01007925    MBY77128.1    GECU01037453    GECU01028979    JAS70253.1    JAS78727.1    GBYB01002464    JAG72231.1    GECZ01000275    JAS69494.1    GECU01032351    JAS75355.1    NEVH01021199    PNF19950.1    GFTR01006635    JAW09791.1    AAAB01008888    EGK97099.1    KQ971372    KYB25377.1    CH477693    EAT37198.1    DS231916    EDS26154.1    JXUM01131183    KQ567678    KXJ69328.1    GAMC01009046    GAMC01009044    GAMC01009040    GAMC01009036    GAMC01009034    JAB97511.1    GDHF01012170    GDHF01004705    JAI40144.1    JAI47609.1    GBXI01003112    JAD11180.1    GEZM01012970    JAV92840.1    KA647223    AFP61852.1    JXJN01016937    JXJN01016938    AXCM01000042    KK852509    KDR22374.1    ADMH02001608    ETN61823.1    ATLV01012285    KE524778    KFB36429.1    GAKP01016466    GAKP01016464    JAC42488.1    CRL06289.1    CH933806    KRG01211.1    AY069210    AAL39355.1    AAN14173.1    KZ288203    PBC33365.1    EDV30536.1    EDW81140.1    CM000364    EDX14850.1    CH480819    EDW53359.1    EDW98298.1    KRK04194.1    KRK04195.1    GL767018    EFZ14370.1    APCN01003212   

Proteomes

UP000218220    UP000007151    UP000005204    UP000008237    UP000283053    UP000053825    + More
UP000005203    UP000053268    UP000000311    UP000078541    UP000005205    UP000075809    UP000078540    UP000095301    UP000095300    UP000019118    UP000030742    UP000015103    UP000007798    UP000007801    UP000000803    UP000008711    UP000002282    UP000192221    UP000268350    UP000001819    UP000008792    UP000279307    UP000053097    UP000183832    UP000078492    UP000007819    UP000235965    UP000192223    UP000075881    UP000075903    UP000075902    UP000076407    UP000075882    UP000007062    UP000007266    UP000008820    UP000002320    UP000069940    UP000249989    UP000075900    UP000075884    UP000076408    UP000069272    UP000092443    UP000092460    UP000075883    UP000027135    UP000000673    UP000030765    UP000009192    UP000242457    UP000091820    UP000000304    UP000001292    UP000075840   

PRIDE

H9IY98    Q9VAK7    Q8IGU5    Q8T0K1   

Pfam

PF12937   F-box-like        + More
PF00071   Ras

Interpro

IPR039940   FBXO33        + More
IPR036047   F-box-like_dom_sf       
IPR032675   LRR_dom_sf       
IPR001810   F-box_dom       
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR027417   P-loop_NTPase       
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       

SUPFAM

SSF81383   SSF81383        + More
SSF52540   SSF52540       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A2H1WQZ6   A0A2A4JDP1   A0A212EPC4   A0A2W1BFN9   H9IY98   E2CA99   + More
A0A3S2NJS1   A0A0L7RBZ1   A0A088A816   A0A194QCF4   E2AVV5   A0A195FWK0   A0A1B6C1M8   A0A158P0Q2   A0A151WVY3   A0A195B1C0   A0A0C9R6S8   A0A0A9WKL7   A0A1B6IFQ1   A0A0A9WVT6   A0A023EX09   A0A1B6EYZ2   A0A1I8MTL9   A0A1B6LV92   A0A0K8UWI7   A0A1I8P024   W8BKK1   N6TY79   T1I131   A0A034VK39   A0A0Q9WT44   A0A0P9A327   Q9VAK7   Q8IGU5   B3P5H0   A0A0R1E918   A0A1W4UGZ1   A0A3B0KB20   I5AMY9   A0A158P0Q1   A0A0Q9W0G2   A0A3L8DCD5   A0A026VUZ1   A0A1J1J2U6   A0A1B6E1F8   A0A0C9PMU1   A0A151JAX4   J9K3Y1   A0A1B6HH84   A0A1B6D3M2   A0A2S2QHB7   A0A1B6HVJ8   A0A0C9QG95   A0A1B6H4G6   A0A1B6HL94   A0A2J7PUE0   A0A1W4WGB8   A0A224XP34   A0A182K0V3   A0A182UWF4   A0A182TNV3   A0A182WVJ4   A0A182KXT5   F5HLD8   A0A139WBR6   Q16RX7   B0WFD7   A0A182HE74   A0A182RBA0   A0A182NCH1   W8BW65   A0A0K8W989   A0A0A1XJW4   A0A1Y1N7E9   A0A1I8MTM0   A0A182YG40   T1PH57   A0A182F9K8   A0A1A9XTG5   A0A1B0BMI1   A0A182MC83   A0A067RRI1   W5JEQ4   A0A084VEN5   A0A1I8P004   A0A034VLQ8   A0A1I8NZZ7   A0A1J1J5X4   A0A0Q9WZ71   Q8T0K1   A0A2A3ENM2   B3MTE6   B4NBH6   A0A1A9WPN2   B4R044   B4HZA2   B4PQ29   A0A1W4U616   E9IYJ5   A0A182I973  

PDB

2AST     E-value=2.04922e-05,     Score=116

KEGG

101742287    no KO assigned | (RefSeq) F-box/LRR-repeat protein 2

GO

GO:0016567   GO:0019005   GO:0031146   GO:0005525   GO:0003924   GO:0005515   GO:0008270   GO:0006468   GO:0005215   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR20933  

Length:

516

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10297

Exp number, first 60 AAs:

0.00147

Total prob of N-in:

0.00767

outside

1  -  516

 

 

Pi

270.487925

Theta

174.319436

Tajima's D

1.197615

CLR

0.420277

CSRT

0.715914204289785

Interpretation

Uncertain