SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15773
Pre Gene Modal
BGIBMGA002235
Annotation
PREDICTED:_protein_O-GlcNAcase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.256 Mitochondrial   Reliability : 1.16 Nuclear   Reliability : 1.182
 

Sequence

CDS
ATGCAATTTAACGGAAGGCTCTTCGTATTGGAGATGATTGATGAGTACATCCGCGAGCTGCACGGCGGCGGGGCGGGCGGCGCGGCGGGCGGCGCGGGGGAGGCGGCGGAGGCGGCGGAGACGGCGCGGCGGGGCGCGGCGGCGGAGGTGCGGTGCGGCGCGGTGCCGGCGGCGGACTCGCTGGCGCCCGCGCGCATGCTCACGTGTCTGCTGGCGGCGCTCCGGGCCAGCGGAGCGAACGGCGTCCACACGACAGTGAGCGCGGCGGACACGCAGCTTCAGCAGTTTTACAGCAAGCTGGGCTTCGTGGAGGTGTCCCGGGCCCGGGGACAGCTCTACCTGGCGCGCCCGCTCTAG
Protein
MQFNGRLFVLEMIDEYIRELHGGGAGGAAGGAGEAAEAAETARRGAAAEVRCGAVPAADSLAPARMLTCLLAALRASGANGVHTTVSAADTQLQQFYSKLGFVEVSRARGQLYLARPL

Summary

Uniprot
Pfam
PF07555   NAGidase
Interpro
IPR011496   Beta-N-acetylglucosaminidase        + More
IPR017853   Glycoside_hydrolase_SF       
IPR016181   Acyl_CoA_acyltransferase       
SUPFAM
SSF55729   SSF55729        + More
SSF51445   SSF51445       
ProteinModelPortal
PDB
6HKI     E-value=5.70708e-05,     Score=104

Ontologies

GO

Topology

Length:
118
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01311
Exp number, first 60 AAs:
0.00184
Total prob of N-in:
0.05760
outside
1  -  118
 
 

Population Genetic Test Statistics

Pi
179.769773
Theta
138.045614
Tajima's D
1.477951
CLR
0
CSRT
0.784110794460277
Interpretation
Uncertain
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