Silkworm Genome Informatics Database

Gene

KWMTBOMO15771

Pre Gene Modal

BGIBMGA002341

Annotation

PREDICTED:_uncharacterized_protein_LOC101741999_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr26(+):9643538-9645190 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.525

CDS

ATGTCGGTTGATTCGGAATCATCGTTAGGCTTGAATATTTATGAAGAGGATTTAAATGACACGAAAACGTGTAATTTATCGAATCAGGCTATAGAGTTCGTGCCAGAAATTGAAAATCGATTGCTTCTATGTGTACTATACCTCCAAAACAACAAAATCAAGACCCTACCGGACGAATTCTTCCCATCACTACCCGCTTTAATGTATCTCGATTTGAGAGATAACATCCTTACCGACCTACCTGTGACAATACAAAATCATCAATGCCTAACGCATTTATTATTACAAAACAACAAATTAACGTCATTACCAAACGAGCTAGGTTCTGTGGTTACATTAAAAGTATTGCAACTGGCGGGAAATCCACTTATGTATCCGCCTCGAGAGATAATAATGGCGGGAACTCGGAAAATCATAACCTATTTACACGAGAAATATATTGAGAATATATTTGCTCGCTCGCAATCGGTAGGCTCCGATGATGCGATCGGTACCTACGAGGAGAACCATAAGGACTCTTCGAAACCGGAACTGGCCAGTTTTAGTTCGGTTCACGGCGGGAAATTGAAATGCTTGTCGGTTCAATTCAGCGAAAAGGAACTTTATGATTCCGATGAGGAATATTACGCGAAAATCAAAGGGAAATGTCCCAAACTACCGAAAAGTAGGACCAAATCGATACTGTCGTACACTCAAAGCGCGAAGTACTTAAATGCGCTGAGAGCTGACAACGTAGACATCCAAAATGAGAAGATAAAAATTTATTATTTAAAAGAGCGTGCGCTTAAGAAACATAAAGAATTGATGGTTAAAAGAGATAAAATCTTGCAGGAGAGAAAGTAA

Protein

MSVDSESSLGLNIYEEDLNDTKTCNLSNQAIEFVPEIENRLLLCVLYLQNNKIKTLPDEFFPSLPALMYLDLRDNILTDLPVTIQNHQCLTHLLLQNNKLTSLPNELGSVVTLKVLQLAGNPLMYPPREIIMAGTRKIITYLHEKYIENIFARSQSVGSDDAIGTYEENHKDSSKPELASFSSVHGGKLKCLSVQFSEKELYDSDEEYYAKIKGKCPKLPKSRTKSILSYTQSAKYLNALRADNVDIQNEKIKIYYLKERALKKHKELMVKRDKILQERK

Uniprot

A0A0L7K511 A0A3S2M6S7 A0A194QI73 A0A212EPA6 A0A0N1II39 A0A2H1W7D3 + More
A0A1B6IX49

Pubmed

26227816 26354079 22118469

EMBL

JTDY01010602 KOB58161.1 RSAL01000019 RVE52763.1 KQ459193 KPJ03151.1 + More
AGBW02013496 OWR43330.1 KQ459941 KPJ19141.1 ODYU01006784 SOQ48953.1 GECU01016197 JAS91509.1

Proteomes

UP000037510 UP000283053 UP000053268 UP000007151 UP000053240

Pfam

PF13855 LRR_8

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt
IPR003591   Leu-rich_rpt_typical-subtyp

Gene 3D

3.80.10.10

ProteinModelPortal

A0A0L7K511 A0A3S2M6S7 A0A194QI73 A0A212EPA6 A0A0N1II39 A0A2H1W7D3 + More
A0A1B6IX49

PDB

4TZH E-value=2.80529e-08, Score=138

KEGG

101741999 no KO assigned | (RefSeq) uncharacterized LOC101741999

GO

GO:0005515 GO:0005488 GO:0006468 GO:0008270 GO:0005215 GO:0006270 GO:0042555 GO:0003707 GO:0006281 GO:0006259

Length:

280

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00207

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.01503

outside

1 - 280

Pi

177.577971

Theta

147.431134

Tajima's D

0.456048

CLR

1.200867

CSRT

0.501474926253687

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics