Gene
KWMTBOMO15770
Pre Gene Modal
BGIBMGA002236
Annotation
PREDICTED:_negative_elongation_factor_A_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.838
Sequence
CDS
ATGGCGAACGTGCGGGATAGTGACATATCTTTGTGGCTCCACAATAAACTCGGTACATCGAACGATTCTTGGACAAGTGGCTCGATTTGTTCACAATTAAACGCTGAAGTATTAAAGAATATAAAAGACTGTTTTCCAGAATTACAACCGCAAGTGAAATTGAAATTATTACTAAGTTTCTTTCATATCCCGCGCAGAAATGTTGAAGAGTGGAAAAGTGAACTCGAGGAGATCCTTGAAGTTGCTGCAATGGATTCAGACCTCTGGGTGGCGATGCTTGCTGAAGTCCTCAAAACGTACCCCTCAGCTGGCACCCTTAATACAGAGATAGCAGAGTTTGATGAGACAAGACCAATATTTAGTGATATGATTGGAGAGTTAAGGAGAGCTTTAGCCAAACATTCGGATCTAGGATTATTACCGCTGGAGTGCCTGTATTTAAATAAGAATGCTTTAGTATCTGTGGTTGGCCAACAAACAAATCCGATAAAACATTTTACACTGAAACGGAAACCTAAATCGGCATCGCTCAGAAGCGAGCTCCTTGCCAAAGCTACAGAGGTTCAGGCAAATCAGAAGAAAGCTCAAGCTCCTACCGTACCAATACGTAGCAGAGGAATGCCTCGGAAAATGACAGATACTACTCCCCTGAAGGGTTTGCCGTCGTTGGGCGCGGGTCGTGCGGCCATGCGCGCGGGCGGCACGGGCTGGCGCTCGCAGCGTCCCGGCATCAAACTCCTCGACATCGCCGACCAGCCTGCCACGCATGCGCAGATCAAGAAACGAAGAAAACTCGAAATGGAGGAGGGCGCAAAGAAGGCTGCCGCCGCTGCCCCGCCCTCTCCCCCTCCGCCGGCCGGTGATAAGACACAAAACAACAAAACAGAAGAACCTCCCACAAGCGTCCCCAGCTCGGAGCCGACGCCCGCGGCGTCCCCCCCTCCCGCCGGGCCGGTCGCCGCGCCCCCCGCGCCCGCCCGCGCCGCGTCCCCCGACCCGCGCCCCGCACTCCTGCACGACGGACCCCCGCCTCTCGCCAGCCCCATACTCGTACAGGGTCCTTCTGGTGGCAAGTTGGTGCTAGCAAGCGGTGGGAAGCCGGTTCTGGTGCCGGCACTGCTTAACTCCTCAGCCGTGTTACTGCAGCCTGGTGGAAAAGCTGTGTTACTGCATAATATTAAACAGGTCACCCAGCCCGTGGTCCAGCAACAACAGCGGACAACTGTTCCCGTACCAGCCTTACATCAGACGCAGACTTTACATCATCAAATACCACAGACGCAGGTGCAGATTCAACAGCAAGTACAGCAGCCCACTCCCGTGCAGCCGGCGCCCCAACCAGCCGCCACGCCTCTACTGCCCAGACGAGGACTTTCCCTTACGCGAGAACAGATGCTGGAAGCCCAGGATATGTTCAGAAATGCAAATCGTGTTACGAGACCGGAAAAAGCTCTTATACTTGGTTTTATGGCTGGATCTAGAGATAATCCGTGTCCGAACCTCGGCAATATTGTTACGATAAAACTCTCTGAAAACATTGAGAATGTTCTACAGTCGGACGACACGTATCTCACTATGCTCTCAGAGATGCATTTCCAAATGAACTACAACAATGGACAGTGGACTAGACTCAAGAAGTACCGACCTATAGACGGCATGGTGCCGCAGAAGATACCTCCAGGATCCACTGTGATATCAGCCGGGAATCAGCAACCTGTAGTTTCAATAGCCAACCAAACGATTAGCTAA
Protein
MANVRDSDISLWLHNKLGTSNDSWTSGSICSQLNAEVLKNIKDCFPELQPQVKLKLLLSFFHIPRRNVEEWKSELEEILEVAAMDSDLWVAMLAEVLKTYPSAGTLNTEIAEFDETRPIFSDMIGELRRALAKHSDLGLLPLECLYLNKNALVSVVGQQTNPIKHFTLKRKPKSASLRSELLAKATEVQANQKKAQAPTVPIRSRGMPRKMTDTTPLKGLPSLGAGRAAMRAGGTGWRSQRPGIKLLDIADQPATHAQIKKRRKLEMEEGAKKAAAAAPPSPPPPAGDKTQNNKTEEPPTSVPSSEPTPAASPPPAGPVAAPPAPARAASPDPRPALLHDGPPPLASPILVQGPSGGKLVLASGGKPVLVPALLNSSAVLLQPGGKAVLLHNIKQVTQPVVQQQQRTTVPVPALHQTQTLHHQIPQTQVQIQQQVQQPTPVQPAPQPAATPLLPRRGLSLTREQMLEAQDMFRNANRVTRPEKALILGFMAGSRDNPCPNLGNIVTIKLSENIENVLQSDDTYLTMLSEMHFQMNYNNGQWTRLKKYRPIDGMVPQKIPPGSTVISAGNQQPVVSIANQTIS
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Interpro
IPR037517
HDAG_dom
ProteinModelPortal
PDB
6GML
E-value=1.74336e-46,
Score=471
Ontologies
Topology
Length:
582
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.008
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00193
outside
1 - 582
Population Genetic Test Statistics
Pi
204.807962
Theta
164.203347
Tajima's D
1.526995
CLR
0.097611
CSRT
0.802509874506275
Interpretation
Uncertain
