SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15769  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002340
Annotation
PREDICTED:_serine/threonine-protein_phosphatase_PP2A_65_kDa_regulatory_subunit_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 1.735 Golgi   Reliability : 1.42
 

Sequence

CDS
ATGGCAGCGAGCGACTCCGGGACGGATGAATCATTGTATCCGATTGCCGTTCTCATAGATGAGCTGAAGAATGAGGATGTACAGCTTCGTTTGAACTCTATAAAGAAGTTGTCGACGATCGCGTTGGCTCTGGGCGTGGAGAGGACTAAATCGGAGTTGATCCCGTTCCTCACTGAGACAATCTATGATGAAGACGAGGTTCTCTTAGCACTAGCTGAACAACTTGGTAGTTTCATCAACTTGGTCGGCGGAGGAGAGTTCGCACATTGTCTTCTTCCACCCCTGGAGACATTAGCAGCAGTTGAAGAGACAGTAGTCCGAGATAAGGCAGTGGCTTCACTCCGTGCCGTTGCCGAGCACCACAGCCCGCAAGCACTCGAGGAACACTTTGTGCCACTAGTACAGCGCCTTGCTGGAGGAGACTGGTTCACTTCAAGAACATCTGCTTGTGGACTATTTAGTGTATGCTATCCACGTGTCTCAGCACCTGTGAAGGCAGAACTCCGTCAGCATTTCCGCTCCCTCTGTCAAGATGATACTCCGATGGTACGCCGCGCTGCTGCCTACAAACTTGGAGAGTTTGCGAAAGTTGTGGAGATTGAATATGTTAAGAGCGATCTTATTCCCATATTTGTGATTTTGGCAGAGGATGATCAAGATTCCGTTCGTCTGTTGGCTGCCGAAGCCTGCGCGGCTGTTGCGGCTCTATTGACTCCTGAGGATATGGAGCAGCATGTGATGCCAACTGTACGCGCACTGTCCGGAGACGCTTCTTGGAGAGTCCGATATATGGTTGCTGATAAGTTCGTAGAGCTGCAACAAGCTGTAGGCCAGGAACTAGCTCGTACAGATCTAGCACAGATCTTCCAGGCACTGCTCAAGGACTCGGAGGCTGAGGTTAGAGCCGCAGCTGCTGGGAAGGTCAAGGACTTCTGTATGAACTTGGATAAAGCTCACCAAGAACACATCATCATGACCATGATCTTGCCACAGATCAAGGACTTGGTGTGTGATGCCAACCAACACGTCAAGTCTGCACTAGCCTCCGTCATCATGGGCCTGAGCCCCATAGTGGGCAGACAGAACACTATTGAACATCTCCTGCCGCTGTTCCTCACACAACTGAAGGATGAATGTCCCGAAGTCCGACTCAACATAATCTCCAACCTCGAGTGTGTGAATGAAGTGATCGGCATCCAACAGCTGGTGCAGTCTCTCCTCCCCGCCATCGTGGAGCTGGCAGAGGACACCAAGTGGAGGGTCCGTCTGGCCATCATCGAGCACATGCCTCTACTGGCGGGACAGCTGGGCCAGGAGTTCTTCGACGAGAAGCTGACCAGCTTGTGCATGTCGTGGCTGGTGGACCACGTGTACGCCATCCGCGAGGCTGCGACCCTCAACCTGAAGAAGCTGGTGGAGCAGTACGGGCCGCAGTGGGCAGAGAACAACGTCATACCCAAAGTACTGAACATGTCGCACGAGCAGAACTACTTGCACAGGATGACGTACTTGTTCTGCATTAACGTGCTGTCCGAAGTGTGCGGCAAGGACATCACGACCAGGGTGCTGCTGCCGACCGTGTTGTCTATGGCCGACGACAATGTTGCCAACGTGCGGTTCAATGTTGCCAAGACGCTGCAGATAATGGCTAAGTACTTGGACCCGGCCGTCATCCAGCCCCAAGTCAAGCCGGTCCTGGAGAAGCTGAACGTGGACCCCGACGTCGACGTCAAGTACTTCGCGTCGGAGGCGATCGCCGGAATAGCTGGATAA
Protein
MAASDSGTDESLYPIAVLIDELKNEDVQLRLNSIKKLSTIALALGVERTKSELIPFLTETIYDEDEVLLALAEQLGSFINLVGGGEFAHCLLPPLETLAAVEETVVRDKAVASLRAVAEHHSPQALEEHFVPLVQRLAGGDWFTSRTSACGLFSVCYPRVSAPVKAELRQHFRSLCQDDTPMVRRAAAYKLGEFAKVVEIEYVKSDLIPIFVILAEDDQDSVRLLAAEACAAVAALLTPEDMEQHVMPTVRALSGDASWRVRYMVADKFVELQQAVGQELARTDLAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSALASVIMGLSPIVGRQNTIEHLLPLFLTQLKDECPEVRLNIISNLECVNEVIGIQQLVQSLLPAIVELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTSLCMSWLVDHVYAIREAATLNLKKLVEQYGPQWAENNVIPKVLNMSHEQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDNVANVRFNVAKTLQIMAKYLDPAVIQPQVKPVLEKLNVDPDVDVKYFASEAIAGIAG

Summary

EMBL
BABH01020881    JF460008    AEB77782.1    ODYU01012348    SOQ58617.1    KQ459144    + More
KPJ03595.1    KQ461111    KPJ08931.1    GAIX01003527    JAA89033.1    GDQN01010116    JAT80938.1    KQ982851    KYQ49861.1    ADTU01003277    GL767538    EFZ13522.1    GL888440    EGI60796.1    LBMM01003176    KMQ93848.1    KQ981958    KYN32006.1    GL435242    EFN73589.1    AJ876407    CAI45288.1    KQ971372    EFA10293.2    KK107168    EZA56198.1    GL450151    EFN81456.1    KK852469    KDR23265.1    NNAY01002716    OXU20710.1    GEZM01033296    JAV84276.1    GEZM01033297    JAV84274.1    BT128596    AEE63553.1    APGK01043334    APGK01043335    APGK01043336    APGK01043337    KB741014    ENN75423.1    KZ288254    PBC30727.1    NEVH01023960    PNF17616.1    PNF17614.1    GECZ01017099    JAS52670.1    GEBQ01025778    JAT14199.1    GECZ01032455    JAS37314.1    GEBQ01010297    JAT29680.1    GGLE01003561    MBY07687.1    GEDC01027176    GEDC01019288    GEDC01011774    GEDC01010575    GEDC01002434    JAS10122.1    JAS18010.1    JAS25524.1    JAS26723.1    JAS34864.1    KQ414731    KOC62413.1    GFAH01000563    JAV47826.1    GEDC01014195    JAS23103.1    GEDC01026331    JAS10967.1    GDKW01001581    JAI55014.1    GFJQ02007956    JAV99013.1    GFWV01019085    MAA43813.1    ACPB03022440    ACPB03022441    GECL01003343    JAP02781.1    GBGD01000924    JAC87965.1    GFTR01007398    JAW09028.1    JH431829    KB632381    ERL94150.1    GEFM01002899    JAP72897.1    GANP01004121    JAB80347.1    KQ435750    KOX76312.1    KQ766333    OAD53705.1    GDIQ01234388    JAK17337.1    GDIP01011979    JAM91736.1    ABJB010192854    ABJB010726455    ABJB010801276    DS668644    EEC03446.1    GBSH01002502    JAG66524.1    GDIQ01226549    JAK25176.1    GBHO01006029    GDHC01020677    JAG37575.1    JAP97951.1    GAEP01001497    GBEW01000945    JAB53324.1    JAI09420.1    GDIQ01128327    JAL23399.1    GDIQ01126983    JAL24743.1    LRGB01002712    KZS06484.1    GL732523    EFX90149.1    AAWZ02023228    GDAY02002263    JAV49169.1    GAAZ01002306    JAA95637.1    GBEX01003137    JAI11423.1    GDIQ01079596    JAN15141.1    GDIQ01081240    JAN13497.1    GDIQ01270803    JAJ80921.1    GDIQ01250288    JAK01437.1    BC046723    CM004478    AAH46723.1    OCT73313.1    AANG04000747    AEYP01098490    GBRD01012371    JAG53453.1    GDIQ01179804    JAK71921.1    GDIQ01270804    JAJ80920.1    GDIQ01243544    JAK08181.1    GDIQ01243545    JAK08180.1    JP016005    AES04603.1    GEBF01000500    JAO03133.1    RAZU01000084    RLQ74810.1    AABR07001873    BC083859    CH474033    AAH83859.1    EDL99781.1    ACTA01138807   
Pfam
PF02985   HEAT        + More
PF00226   DnaJ
Interpro
IPR000357   HEAT        + More
IPR011989   ARM-like       
IPR016024   ARM-type_fold       
IPR021133   HEAT_type_2       
IPR034085   TOG       
IPR001623   DnaJ_domain       
IPR036869   J_dom_sf       
IPR031090   PP2A_A_meta       
SUPFAM
SSF48371   SSF48371        + More
SSF46565   SSF46565       
Gene 3D
PDB
2PF4     E-value=0,     Score=2202

Ontologies

Topology

Length:
590
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00944999999999997
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00101
outside
1  -  590
 
 

Population Genetic Test Statistics

Pi
169.787517
Theta
166.429101
Tajima's D
0.360037
CLR
0.160578
CSRT
0.467526623668817
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 VDILDPALLR 100.00 7e-08
28556443 SALASVIMGLSPIVGR 100.00 6e-05
28556443 TDLAQIFQALLK 100.00 6e-05
28556443 LIDELK 100.00 6e-04
28556443 VLLPTVLSMADDNVANVR 100.00 6e-04
28556443 QNTIEHLLPLFLTQLK 100.00 0.001
28556443 FVELQQAVGQELAR 100.00 0.001
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