Pre Gene Modal
BGIBMGA002239
Annotation
PREDICTED:_probable_sodium/potassium/calcium_exchanger_CG1090_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 1.955
Sequence
CDS
ATGCGGCGTCCTCGTCGTCACAGGTGGCTGACGATATCTGTTTTCTTCATCGCTTACTCCGTGATCCAAGCCGTGTTCAGCGCGACCACGGTGTCGGAGCCGTCCGCTCCAAGTAAAGCAGACACCACACCGGACGAGTCCGTTGTAAAGACCACGCCTCCCGTTGAATACACCAGTAAGGCCGGACAGAAGAAAGAAGACAGTACTGACAGTCAGGGAAATTCCGAAGAAGTGGGTGAGACGGCTACAGAAGGAGGTAAAAAGAGTCTCAAAGGACTGATTGACGATGAAGAAGATGATAAGAAGACTATCAAGGACGCTGGATACGAGGATGTAAGAATTGAAAGGGACTGTTTTATTTGTCCGTAA
Protein
MRRPRRHRWLTISVFFIAYSVIQAVFSATTVSEPSAPSKADTTPDESVVKTTPPVEYTSKAGQKKEDSTDSQGNSEEVGETATEGGKKSLKGLIDDEEDDKKTIKDAGYEDVRIERDCFICP
Summary
Similarity
Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF01699 Na_Ca_ex
ProteinModelPortal
Ontologies
PANTHER
Topology
SignalP
Position: 1 - 27,
Likelihood: 0.858920
Length:
122
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.75668
Exp number, first 60 AAs:
20.75668
Total prob of N-in:
0.98212
POSSIBLE N-term signal
sequence
inside
1 - 8
TMhelix
9 - 31
outside
32 - 122
Population Genetic Test Statistics
Pi
246.21342
Theta
162.264412
Tajima's D
1.456824
CLR
0.336006
CSRT
0.772911354432278
Interpretation
Uncertain
