SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15762  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002239
Annotation
PREDICTED:_probable_sodium/potassium/calcium_exchanger_CG1090_[Bombyx_mori]
Full name
Probable sodium/potassium/calcium exchanger CG1090      
Alternative Name
Na(+)/K(+)/Ca(2+)-exchange protein CG1090
Location in the cell
PlasmaMembrane   Reliability : 3.801
 

Sequence

CDS
ATGTATGTACACAAACAGAGTCAGAGCTACGACCCTCCGTCAGCGCGACTTGAACAGCCTCAGACCGCGAGCCCCCAACAGTCGCAACCGCAGCAAACGCAGCAACAGGCCCCGCCGCCACAAGCACCGGCGGCTCCCGCTTACTACAAGGCAAAGGAGTACAATCCCGAGACAGCCGTGGATCCTCTGGTCAAGCCGATCGGAGCCAATAAATTCCAATTGGCTTGCTGGTACATTGCGTTCCCGGTTCACTGGTCGTGTCGGCACACGATGCCTGACTGCCGGGGACCCTGGTACCCGGTCACCTTCATCATATCGATGCTCTGGATCTCGTTCTACTCCTACTTCATGGTCTGGATGATAACGATTATCGGCTATACACTCGGGATCCCGGACACGGTCATGGGTCTCACGTTTGTGGCGGCTGGAGTCTCTGTACCCGACGCGCTCTCCTCGCTCGCCGTCATCAAAGAAGGTTACGGAGACATGGCGGTGTCGAATGCCGTCGGCTCGAACGTCTTCGACATCCTGGTTTGCCTGGGACTGCCGTGGTTCCTGCAGACCGCCGTCATCCACCCCGGGAGCCATGTGAACGTTTACAGCAAAGGTCTGATCTATTCCACGTTATCGCTGTTTTCGACCGTCGTGTTTCTGGTGGTGGCTACCCACGCCAACGGCTGGAAGCTGGACCGGAAGTACGGCGCAGTGCTGATGGTCTGGTACGTTCTCTTCATAACACTGGCGAGCCTATACGAGCTGAACATCTTCGGGGAATACAACAAGCCGGATTGTATTTCGAAATATTAA
Protein
MYVHKQSQSYDPPSARLEQPQTASPQQSQPQQTQQQAPPPQAPAAPAYYKAKEYNPETAVDPLVKPIGANKFQLACWYIAFPVHWSCRHTMPDCRGPWYPVTFIISMLWISFYSYFMVWMITIIGYTLGIPDTVMGLTFVAAGVSVPDALSSLAVIKEGYGDMAVSNAVGSNVFDILVCLGLPWFLQTAVIHPGSHVNVYSKGLIYSTLSLFSTVVFLVVATHANGWKLDRKYGAVLMVWYVLFITLASLYELNIFGEYNKPDCISKY

Summary

Description
May function in the removal and maintenance of calcium homeostasis. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+) (By similarity).
Similarity
Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. SLC24A subfamily.
Keywords
Antiport   Calcium   Calcium transport   Complete proteome   Ion transport   Membrane   Potassium   Potassium transport   Reference proteome   Repeat   RNA editing   Signal   Sodium   Sodium transport   Symport   Transmembrane   Transmembrane helix   Transport  
Feature
chain  Probable sodium/potassium/calcium exchanger CG1090
EMBL
BABH01020876    BABH01020877    NWSH01004323    PCG65225.1    KQ459144    KPJ03605.1    + More
KQ461111    KPJ08939.1    GEZM01036836    JAV82378.1    GBYB01012865    JAG82632.1    GBYB01012864    JAG82631.1    GECU01025506    JAS82200.1    GL445549    EFN89468.1    KQ971372    EFA09437.2    GL768421    EFZ11371.1    KYB25176.1    GECZ01000206    JAS69563.1    CH478335    EAT33209.1    KQ434960    KZC12689.1    KQ976664    KYM78300.1    ADTU01001044    ADTU01001045    KQ982402    KYQ56843.1    KQ978223    KYM96270.1    KQ981855    KYN34871.1    KQ980275    KYN17024.1    GL888002    EGI69282.1    JXUM01011370    KQ560329    KXJ83011.1    NEVH01004410    PNF39724.1    JR036456    JR036457    JR036458    AEY57157.1    AEY57158.1    AEY57159.1    GEDC01005781    JAS31517.1    KQ760478    OAD60235.1    LBMM01002249    KMQ95077.1    KK107293    EZA53280.1    QOIP01000005    RLU22496.1    GL440715    EFN65479.1    GBXI01012906    JAD01386.1    KB632294    ERL91668.1    KQ414590    KOC70397.1    GGFL01000063    MBW64241.1    DS231979    EDS30208.1    CH933806    EDW15254.2    ADMH02000289    ETN67110.1    AAAB01008898    EAA09212.5    APCN01005401    CCAG010016995    OUUW01000014    SPP88283.1    SPP88282.1    ATLV01006066    KE524335    KFB35229.1    JXJN01012895    JXJN01012896    AXCN02001605    JRES01000409    KNC31578.1    CM000160    KRK02593.1    KRK02594.1    AE014297    AGB95635.1    AY094726    AAM11079.1    AAN13306.4    KRK02595.1    CH940656    EDW58645.2    KRF78377.1    KRF78378.1    AXCM01000353    CH902617    EDV42864.2    CH964272    EDW83722.2    GBXI01017461    JAC96830.1    CH916369    EDV92624.1    CM000364    EDX11589.1    CH479185    EDW37920.1    CH480821    EDW54821.1    UFQS01000650    UFQT01000650    SSX05758.1    SSX26117.1    CH954181    EDV47769.1    APGK01050286    KB741169    ENN73311.1    CM000070    EDY68441.2    EDW95647.2    KQ435876    KOX70134.1    CP012526    ALC46126.1    GDHF01033037    JAI19277.1    GEBQ01000979    JAT38998.1    GAMC01011793    JAB94762.1    GFXV01000434    MBW12239.1    ABLF02019435    ABLF02019436    GGMR01012737    GGMR01016801    MBY25356.1    MBY29420.1    GBHO01034037    GBRD01011022    JAG09567.1    JAG54802.1    DS235797    EEB17198.1    GFXV01008028    MBW19833.1    ACPB03018838   
Pfam
PF01699   Na_Ca_ex        + More
PF03820   Mtc
Interpro
IPR004837   NaCa_Exmemb        + More
IPR004481   K/Na/Ca-exchanger       
IPR004686   Mtc       
PDB
3V5U     E-value=1.17851e-05,     Score=115

Ontologies

Topology

Subcellular location
Membrane  
Length:
268
Number of predicted TMHs:
5
Exp number of AAs in TMHs:
111.41379
Exp number, first 60 AAs:
0.00081
Total prob of N-in:
0.99078
inside
1  -  107
TMhelix
108  -  130
outside
131  -  133
TMhelix
134  -  156
inside
157  -  167
TMhelix
168  -  190
outside
191  -  204
TMhelix
205  -  227
inside
228  -  233
TMhelix
234  -  256
outside
257  -  268
 
 

Population Genetic Test Statistics

Pi
226.501954
Theta
181.147047
Tajima's D
0.860957
CLR
0
CSRT
0.622168891555422
Interpretation
Uncertain
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