SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15760  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014217
Annotation
PREDICTED:_uncharacterized_protein_LOC106116430_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 3.512
 

Sequence

CDS
ATGCACACCGAAAAGGATGCGGCATATGTAACCCCGGAATGCAAGGACATATTCAGATCGGTATCGTTGTTTATGGCCGCGAACGTCCGCAAATCAGTAGCCGAAGGTCGCTCCGACGCCATTCCCATCTTCCTTCAGGACATCCCCAAGCTATTCCACAGGAAGATCATCCAGCCCGACATCGCTCTTATCCAGGTGTCTCCCCCCGACAACCATGGCTACTGCAGCCTGGGCACCTCCGTGGACTGCGTCAGGGCCGCGTTGGTTAACTCCAAAATCATCATAGCTCAAGTGAACGTGAACATGCCTCGCACGTTCGGCGACGCTATAATACACGTGTCGCACATCGATTACGCGGTGGAGGACAACACGCCCCTCCCGGAGCACGGCGTCGGGAAGGCGGCCAGCGCCGAGGAAACGGAGATCGGGCGGCTGATCGGCGAGAACCTCGTCGAGGACGGCGCCACGCTGCAGATGGGTATCGGCAGCATCCCGGACGCCGTGCTCTCGGCACTGAAGGACCACAAGGACCTCGGCATCCACTCGGAGATGTTCAGTGTTGGCGTCATCGACCTGGTAAAGAGGGGAGCCGTCACCAACAACCTGAAGAAGAATCACAAAGGCCGTATCGTCGGCAGCTTCCTGGTCGGTAACCGCCAGCTGTACGACTTCGTTGACAACAACCCCTTCATTGAGATGCTGGAGATCGACTACGTGAACAACACCCACGTGGTCTCCCTGCAGCCGAACATGACCGCGATCAACTCCTGCATCGAGGTGGACCTCACCGGACAGATATGCGCCGACTCTATCGGTACCCGCATGTACTCCGGTTTCGGCGGGCAGGTTGACTTCATCCGCGGCGCCGCGGAGGCTGTGGACGGTAAAGGCAAACCCATCATAGCTCTCGTCTCCAACACCAAGAAGGGCGAGAGCAAAATCGTGCCTACGCTCAAAGTCGGAGCTGGTGTGGTGACGACTCGGGCTCACGTGCATTACGTGGTTACCGAACAAGGGATAGCTTATTTATTCGGCAAAACCCTCAGACAGAGGGCATACGAATTGATCAAAATCGCTCATCCAGACCACCGCGAAGCCCTAGAGAAAGCGGCCTTCGAACGCCTTAAGTGCATGCCTGCGCCTTAA
Protein
MHTEKDAAYVTPECKDIFRSVSLFMAANVRKSVAEGRSDAIPIFLQDIPKLFHRKIIQPDIALIQVSPPDNHGYCSLGTSVDCVRAALVNSKIIIAQVNVNMPRTFGDAIIHVSHIDYAVEDNTPLPEHGVGKAASAEETEIGRLIGENLVEDGATLQMGIGSIPDAVLSALKDHKDLGIHSEMFSVGVIDLVKRGAVTNNLKKNHKGRIVGSFLVGNRQLYDFVDNNPFIEMLEIDYVNNTHVVSLQPNMTAINSCIEVDLTGQICADSIGTRMYSGFGGQVDFIRGAAEAVDGKGKPIIALVSNTKKGESKIVPTLKVGAGVVTTRAHVHYVVTEQGIAYLFGKTLRQRAYELIKIAHPDHREALEKAAFERLKCMPAP

Summary

EMBL
KQ459144    KPJ03599.1    KX685521    AQQ72787.1    NWSH01002221    PCG68885.1    + More
RSAL01000019    RVE52770.1    AK404073    BAM20135.1    CH477281    EAT44921.1    GGFJ01004874    MBW54015.1    UFQS01000456    UFQT01000456    SSX04184.1    SSX24549.1    GGFM01001801    MBW22552.1    GGFL01004466    MBW68644.1    GGFM01006813    MBW27564.1    GGFK01003010    MBW36331.1    AXCM01000387    AXCN02001202    GGFK01003009    MBW36330.1    GGFJ01004873    MBW54014.1    JXUM01077418    JXUM01077419    GAPW01001206    KQ563008    JAC12392.1    KXJ74644.1    GGFL01004465    MBW68643.1    DS231868    EDS40753.1    AAAB01008898    EAA09276.3    APCN01005805    APGK01058793    BT128444    KB741292    KB632334    AEE63401.1    ENN70306.1    ERL92766.1    GFDL01008625    JAV26420.1    ATLV01019962    KE525286    KFB44741.1    KQ971371    KYB25574.1    AJWK01018028    GAMD01001355    JAB00236.1    GFDF01001725    JAV12359.1    CH940656    EDW58384.1    GANO01002069    JAB57802.1    CP012526    ALC46536.1    KK853305    KDR08719.1    CH954182    EDV53132.1    FJ821034    ACN94744.1    JRES01000835    KNC27929.1    CM000070    EAL26766.1    CH479186    EDW39298.1    GEDC01029297    JAS08001.1    OUUW01000005    SPP80934.1    CH964272    EDW84021.1    KRF99945.1    KRF99946.1    KA645736    AFP60365.1    GDAI01000150    JAI17453.1    CM000160    EDW99043.1    LJIG01009260    KRT83435.1    GFDG01001352    JAV17447.1    GFDG01002542    JAV16257.1    GEMB01000091    JAS03020.1    GBBI01000285    JAC18427.1    CM000364    EDX14952.1    GEBQ01003940    GEBQ01003652    JAT36037.1    JAT36325.1    AK417623    BAN20838.1    CH916373    EDV94628.1    AE014297    AY069288    AAF56990.1    AAL39433.1    CH902617    EDV44086.1    GECU01032232    GECU01003257    JAS75474.1    JAT04450.1    GBGD01001299    JAC87590.1    GDHC01021589    GDHC01011898    JAP97039.1    JAQ06731.1    GBHO01012075    JAG31529.1    ADMH02001950    ETN60354.1    CH933806    EDW16918.1    GECL01003568    JAP02556.1    GFTR01006613    JAW09813.1    GDKW01001276    JAI55319.1    ACPB03023874    GFDG01004015    JAV14784.1    GAMC01008902    JAB97653.1    GEZM01038614    JAV81593.1    DS235797    EEB17172.1    GDHF01032086    GDHF01015902    JAI20228.1    JAI36412.1    GAKP01003780    JAC55172.1    GBXI01010131    GBXI01001763    JAD04161.1    JAD12529.1    CVRI01000010    CRK88956.1    KQ434803    KZC05952.1    AAZX01002661    AAZX01018944    QCYY01001138    ROT80255.1    KQ760549    OAD59870.1    NEVH01015827    PNF26527.1    KQ414581    KOC70996.1    CAQQ02200076    GL449414    EFN82773.1    CH480819    EDW53457.1    KK107019    QOIP01000007    EZA62790.1    RLU20949.1   
Pfam
PF02550   AcetylCoA_hydro        + More
PF13336   AcetylCoA_hyd_C
Interpro
IPR003702   ActCoA_hydro        + More
IPR038460   AcetylCoA_hyd_C_sf       
IPR026888   AcetylCoA_hyd_C       
IPR037171   NagB/RpiA_transferase-like       
SUPFAM
SSF100950   SSF100950       
Gene 3D
PDB
2OAS     E-value=1.39515e-94,     Score=883

Ontologies

Topology

Length:
381
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01114
Exp number, first 60 AAs:
0.00122
Total prob of N-in:
0.03022
outside
1  -  381
 
 

Population Genetic Test Statistics

Pi
180.323731
Theta
152.005851
Tajima's D
1.036149
CLR
0.283297
CSRT
0.665816709164542
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 IIIAQVNVNMPR 100.00 5e-16
28556443 TFGDAIIHVSHIDYAVEDNTPLPEHGVGK 100.00 2e-14
28556443 TFGDAIIHVSHIDYAVEDNTPLPEHGVGK 100.00 2e-14
28556443 SDAIPIFLQDIPK 100.00 2e-14
28556443 SDAIPIFLQDIPK 100.00 2e-14
26822097 VVHMHTEKDAAYVTPECK 96.55 6e-14
26280517 TETEAVQFIK 96.55 6e-14
25044914 TFGAISTTR 96.55 6e-14
28467696 TFGCGSAIASSSIATEWVK 96.55 6e-14
28556443 AASAEETEIGR 100.00 1e-06
28556443 AASAEETEIGR 100.00 1e-06
28556443 AYELIK 100.00 2e-05
28556443 AQGAAATPVPLLNAMTEVGK 100.00 2e-05
26822097 SDAIPIFIQDIPK 100.00 1e-04
28467696 VVHIVNSIQNADIAEDVR 100.00 1e-04
26822097 GKPIIAIVSNTK 100.00 0.001
26280517 MIADPSGNFIK 100.00 0.001
25044914 MYQGAGGVPGGMPGFPGGAPGAGGAAPGAGGAGPTIEEVD 100.00 0.001
27102218 DDIAIHINFR 100.00 0.001
28467696 MYNMITTSFICDGGDGFTMIK 100.00 0.001
28556443 MYSGFGGQVDFIR 100.00 0.001
28556443 MYSGFGGQVDFIR 100.00 0.001
28556443 IVGSFLVGNR 100.00 0.001
28556443 IIQPDIALIQVSPPDNHGYCSLGTSVDCVR 100.00 0.001
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