Gene
KWMTBOMO15751
Pre Gene Modal
BGIBMGA014357
Annotation
gag-pol_polyprotein?_partial_[Lasius_niger]
Location in the cell
Nuclear Reliability : 3.65
Sequence
CDS
ATGGATTCTACAGTTTATGCAGCCAATGATGAAAAAATGAAAGCACAAGGATCAGGTACTGTCCATGGAATGTCATGCGATTTACAAAATACTTTATTTATACCAGACCTAGCACAAAACCTTTTGTCTGTAAATTGTATTACCAACAATGATGGTTCTGTTGTGTTCACAAAGAATAAAGTGGAGATTTACAAAAATTCAAAATTAATTTTAACCGGCAAAAAAGAAAATGGCTTATACAGGGTGAATTTAGAAAAAGAACTGAAAAATGAAAATAAATCCTTACTTACACAAGTAAACGGAACAGCATTGGAATGGCATGCAAAACTGGGACACCCGGGTAAATCAGTACTAGAAACATTAACAAAAGTGGCAGACGGCATTAATATACAAGGTCCAAAAGTATTACAAGAACAGTGTAAAATATGTGCTGAAGCAAAACAATCAAGACTACCATTTAATACTATCAGAACTCGTGCTGAAAGGTACCTACAAATAATACACACAGACATATGTGGTCCCTTTGAAGAAAAAACTTATGATGGATACAGGTATGTTTTAACAGTAATGGACGACTTCAGTCATTTTACAAAAATCTATTTACTTAAAAACAAGAGCGATGCAAAAGAAGAAATTAAAAATTATATTGAAGAAACGGAGCGAGAGAAAAATAGTAAAGTATCGACTATAAGATGCGACAATGGAGGTGAATATACAAGTAACGATTTTAAAGCATTTTGTCAACAAAAAGGCATAAAATTAGACTACACAGTACCCTACTCACCACAATTAAATGGAAAAGCTGAACGCCTAAACCGGACATTATTAGAAAAAACAAGAGCATTACTCTTTGATTCTAAATTGAACAAAGAAATGTGGGGTGAAGCAATATATTGTGCTACTTATATTTTAAACAGACTACCAAGTGATGCCCTGAAAAACAAAACACCATATGAAATGTGGGTTGGAAAAAAGCCTAATATATCTAATATGCAAAAGTTTGGTTCTACTGTCTATGCAAAACAGTTACATCCAAATGTAAAGAAACTGGATCCTAGAAGCAAGAAACTAATAATGATTGGATACACTAATAATGGGTACAGACTGTGGAATGACAAGGAGAGAAAAATAGAGATATCAAGGGACATAGTGATAGTAAAAAGTGAAACTGAACAAAAGAAAGAAAACTATAAGAAAATAAATAATAATAAAAGTGAAAATGATGAAAAAGAGACAGACCAGGAAGAAGAGACAACAGAAAACCAGGAAGAGACTATAGACAACCAGAAAGAGACAACAGAAAACCAGGAACAGATTATAGAAAAGCAGGAAGAGACAACAGAAGATACCAGAACAGAAGAAAATAAAAATAATGAGACTTTTGAAGATGTAGTATCAGAAACTGAATCAGAAGACACAGAAAGAGAAAGAAACAGACATAATGAAGAAGACGGTTACCTAAGAAGAAGCAAGAGAATTAGACACATACCAATACATTTAAGAGACTACAGTTTACTTACTTACAGAGAGGCTGTAACATCTAAAGAGGGAGAAAACTGGGAGAAGGCCATAAATTCGGAGAAGGAATCCCTGGAAATCAATAATACCTGGGAAATAGTAGACAAGAAAGAGGCAAAAGATAGTAAAATACTTACAAACAAATGGGTATTCCGCGTGAAAGATAATGGGACTTATAAAGCTAGACTTGTTGTACGAGGATTTGAACAAAACAGTATTGACTACAATGAAATATACAGTCCAGTTGTCAGTCAGTCAACTTTAAAATCTTTATTTGCACTTGCTGCTTCTAAAGACTATAACATGATGACATTTGATGTTAAGACTGCATTTTTATATGGAGAGCTGGAAGAAAATGTGTATATGAATATACCGGATGGTTATGAAAAACAACCTGGGAAAGTTTGTCGATTAAAGAAATCCTTATATGGACTAAAACAAGCTCCTATTACATGGAACAAAAGATTTACAAAAGCAATGTTAAAACTTGGTTTAAAAGCTACCAAAACAGATCAGTGTGTATTTACAAATGAAGATAATACAATAATAATAGCAATCTATGTAGATGATGGACTTGCTTTGGCTAAAGAAAAGCAAACATTAAAAAACATTTTAAACTGCCTAGAAAAGGAATTTGAAATAAAAGTATACAATGATCCTACTACTTTTATTGGATTTGAAGTCAAGAAGACTGAGAAAGGTATAACACTGAAACAAGAAAGCTACATTGGAAACTTATTAAAGAAATTCAGTATGGAAGATTCTAAACCTGTTAAGACTCCCTGTAACACAGAAAATAAAACAGAAACGCAAAACACAGATTCTATAAATTTTCCATATAGAGAACTGATTGGAGGACTTCTATATGTATCTACAAGAACAAGGCCAGACATAAGTCAAGCTGTAAATGAAGCAAGCAGAAAAATAGAAAACCCTACAAAAGATGATGTGATAGCTGCAAAGAAAATACTAAAATATTTAAATGGAACAAGACAGAAAGGAATCATGTACAAGAAAGGAGGAGATATTTCAAAACTAAATGCATACTTACAACCGGATTTGTGA
Protein
MDSTVYAANDEKMKAQGSGTVHGMSCDLQNTLFIPDLAQNLLSVNCITNNDGSVVFTKNKVEIYKNSKLILTGKKENGLYRVNLEKELKNENKSLLTQVNGTALEWHAKLGHPGKSVLETLTKVADGINIQGPKVLQEQCKICAEAKQSRLPFNTIRTRAERYLQIIHTDICGPFEEKTYDGYRYVLTVMDDFSHFTKIYLLKNKSDAKEEIKNYIEETEREKNSKVSTIRCDNGGEYTSNDFKAFCQQKGIKLDYTVPYSPQLNGKAERLNRTLLEKTRALLFDSKLNKEMWGEAIYCATYILNRLPSDALKNKTPYEMWVGKKPNISNMQKFGSTVYAKQLHPNVKKLDPRSKKLIMIGYTNNGYRLWNDKERKIEISRDIVIVKSETEQKKENYKKINNNKSENDEKETDQEEETTENQEETIDNQKETTENQEQIIEKQEETTEDTRTEENKNNETFEDVVSETESEDTERERNRHNEEDGYLRRSKRIRHIPIHLRDYSLLTYREAVTSKEGENWEKAINSEKESLEINNTWEIVDKKEAKDSKILTNKWVFRVKDNGTYKARLVVRGFEQNSIDYNEIYSPVVSQSTLKSLFALAASKDYNMMTFDVKTAFLYGELEENVYMNIPDGYEKQPGKVCRLKKSLYGLKQAPITWNKRFTKAMLKLGLKATKTDQCVFTNEDNTIIIAIYVDDGLALAKEKQTLKNILNCLEKEFEIKVYNDPTTFIGFEVKKTEKGITLKQESYIGNLLKKFSMEDSKPVKTPCNTENKTETQNTDSINFPYRELIGGLLYVSTRTRPDISQAVNEASRKIENPTKDDVIAAKKILKYLNGTRQKGIMYKKGGDISKLNAYLQPDL
Summary
Uniprot
ProteinModelPortal
PDB
5UOQ
E-value=1.3468e-08,
Score=145
Ontologies
GO
Topology
Length:
860
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000850000000000001
Exp number, first 60 AAs:
0.00067
Total prob of N-in:
0.00011
outside
1 - 860
Population Genetic Test Statistics
Pi
37.742429
Theta
36.9232
Tajima's D
0.470748
CLR
0
CSRT
0.515324233788311
Interpretation
Uncertain
