Gene
KWMTBOMO15746
Pre Gene Modal
BGIBMGA002251
Annotation
PREDICTED:_huntingtin_[Bombyx_mori]
Location in the cell
Cytoplasmic Reliability : 1.006 Golgi Reliability : 1.255
Sequence
CDS
ATGAATCGTAAATCTTTAGGTGTTATAGTCGGATTTCGAGTAGAAAACGGTCTCACCGAAGCGGTACATCTAACCTGGCTACTGGTGAACAGAGTTCATATACTAGTCAGTCAGTTCTCTCAAACTCTGGTCCAGGGTCTCATCTCCAGAGTTCAGCAGACGAGTGGAGCGTCCGGCTTGCTGCTGCAGGCCATCGCCGCTAGATGTCAGGGCTGTTTGAAGGACGAGTTCGCTTTGAACGTGTACAAGATCCTGTCGTTTTGCCACGAGAGTCAGTCCGGGGCGCTGGTGTTCCTCATATGCCGGATCATCGGGAAACTGGAGCCCGCCATCGCGGTCAAGTTCGCAAAACTGGCGATAGAACGTTGTCGTGCGCTCAAAGACGTGCCGCCCGACAATATGAACGCGCAACTATCGAAAGAGGACGTCCAAGTCGCGTTGGAGCTTTTGCAGCGGGACAAAGTTCACGTCAGGTACCCGGCGCTGGTGATGGAATTAAACTCTTTAGCGTCGAGCGTGTTCGACTTATCGCCTCTCGACTTGTCGCAGGACCGAGCGATCAACCCCCAGCACGTGCTGACCACCAATGTCGATTCTGGCTGGCTCTTGAACCAGATTAAAAATAGATGCTGCAGGTCTGACTGTGTCCCGCCGAAGATGTCGAAGCACAACCACCTGGCGGAAATACTCTCGAACCTCTCCCACGAAGATGTGAGCACCGTGATGTCATGTCCGGAATTCGAAAGGAAAATTCTATGTTCGGCATTTAAAGTGGCCAGCGACAGCTACTTGAGAGAGTTCCTCAATGTCTACGCAGAATACGAAAGGAAAGAGCTAGAGAAAGATAAGGCAAGAGAACGAATCGGCTTGAAGAGGGATGAGGAGATGACGTCATCGATCGACAGCAACAAACTAACAGTCGCGAACACGCTGCACGTGTTCAAGAAGAGCGACAACAAGGAATCGAAATCTCAATTCTTCATACCGATAGCGGACAACGAGAAGGAGTTTGGGAATTTGCAGCTTACTGACGACGAAATAGAGTTGAGTTTGCCGGAGCTGCCCGTGATGTACCGCGTCGCGTTATCGACGTTCGACAGGTCCCTAATTGAAGTTATACGGCTGTTCCCGAAACAGAACCGGCCATTGAGCCAGTCGGAGAACTTTGACTTGAGCGTTGAACACACAGTGGACCGTTATACGCGCAGATGCCACCAAGTGTTCCAAGACAAGCTGTTTTACCACGAGTACGTGACGCTGCAGACGGTACTGACCGGTTACTTGGACGCCGCGACCAGAATAATGAACGCCATAGACGAGGCCGACTGTGATCTATTAGAAAAATGCATCGAGAACATTCTGCCGCTGACAATAGCCAAGAATATTTCGGTTTTTTGCGTCATTTCCCTGCAGTACCTGTCGTTTTTGATTAAGAACAAGAGTATTGTCGAGTCGCCCGTGCACGCGGACGTCTCGTTTCGGGCCACGGACGCTGCGACCCGGCACGTGACAGTCGACAGCCTCGTCGCGGTGACAGTCGAGAACGTGTCAAAAGCCTTGGCCGTCAGAGAGATCTGGATGGAGTTGAACGCCGATAGCAACGCTAATAGAACCCAATCGGCGATCAGCTGTTTATACGCCGTCGTCAAGTACTTGGTCAAGGACACAAAACCTCTCGTCCTAAAACATTACATGCGAACTGACGATTCCGGTCCAAAGCCGGATATACTAATAACCGGCGATAAGCTGGTCACCCTTGTCGAATACTGGGAGGACAATTTCTACGCCGGTCATGGATATGTGATGCCCAAATGCTATAAAAAGCCGTTGGAGAGTATGCTTGTCAGTTTGGCCAGATTAGATGTTGTGAGTAACGTGGCGCTTATCCCACCGATAGCCTGGTCGACAGTGGAGGTGGCCATGAAAAAGGACCAACTGCAGAAGATAGAGCTTCCGCTTCAAGCTCTCCAGGATCAGGATGTTCTGGAAGCTTTTCTATTCAGGGTCAATCTGATAGGCTGGTCGAACAAGAAGCAGTTCGAGGAGATATGGGTGGGGCTGCTGGGCGCGCTGCAGGGGAACGGGCCGCACTGCGCCGTGCGCGGCGTCACGCAGCTGCTGCTGAGCGCGCTGCCCCGCCGCGCCGCCGCCCCGCTGCACGTGCCCCGCGCGCACCCCCCCGCACCTTCCGGCGGGTGA
Protein
MNRKSLGVIVGFRVENGLTEAVHLTWLLVNRVHILVSQFSQTLVQGLISRVQQTSGASGLLLQAIAARCQGCLKDEFALNVYKILSFCHESQSGALVFLICRIIGKLEPAIAVKFAKLAIERCRALKDVPPDNMNAQLSKEDVQVALELLQRDKVHVRYPALVMELNSLASSVFDLSPLDLSQDRAINPQHVLTTNVDSGWLLNQIKNRCCRSDCVPPKMSKHNHLAEILSNLSHEDVSTVMSCPEFERKILCSAFKVASDSYLREFLNVYAEYERKELEKDKARERIGLKRDEEMTSSIDSNKLTVANTLHVFKKSDNKESKSQFFIPIADNEKEFGNLQLTDDEIELSLPELPVMYRVALSTFDRSLIEVIRLFPKQNRPLSQSENFDLSVEHTVDRYTRRCHQVFQDKLFYHEYVTLQTVLTGYLDAATRIMNAIDEADCDLLEKCIENILPLTIAKNISVFCVISLQYLSFLIKNKSIVESPVHADVSFRATDAATRHVTVDSLVAVTVENVSKALAVREIWMELNADSNANRTQSAISCLYAVVKYLVKDTKPLVLKHYMRTDDSGPKPDILITGDKLVTLVEYWEDNFYAGHGYVMPKCYKKPLESMLVSLARLDVVSNVALIPPIAWSTVEVAMKKDQLQKIELPLQALQDQDVLEAFLFRVNLIGWSNKKQFEEIWVGLLGALQGNGPHCAVRGVTQLLLSALPRRAAAPLHVPRAHPPAPSGG
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
SUPFAM
SSF48371
SSF48371
Gene 3D
ProteinModelPortal
PDB
6EZ8
E-value=1.33918e-11,
Score=171
Ontologies
PANTHER
Topology
Length:
732
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.26955
Exp number, first 60 AAs:
0.16719
Total prob of N-in:
0.00869
outside
1 - 732
Population Genetic Test Statistics
Pi
211.673467
Theta
142.413543
Tajima's D
1.526039
CLR
0.139545
CSRT
0.794010299485026
Interpretation
Uncertain
