Silkworm Genome Informatics Database

Gene

KWMTBOMO15745

Pre Gene Modal

BGIBMGA002251

Annotation

PREDICTED:_uncharacterized_protein_LOC105841809_[Bombyx_mori]

Location

Bomo_Chr26(-):8775893-8791458 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.058

CDS

ATGCTGGAGCCGAAGGCTGGGACGGGTCTGGCGGCCCGCGTGGCGCTGCTGTCGTGCGTGATACACACGAGCGGCGCGTTCAGCCAGCCGGGCCAGTGGTGCTGGGCGGCGTCGCAGCTCATCGCGCTCACGGGCCCGCAGCACGCGCGCCTCACGCAGTACAGCGCCGCCGGCCGCCCGCTGCTCACCGCGCTCTCCGCCTGCCTGTGCGTGCTCGACGGGTTCGACGGCCTGCAGGAACTGTCAACGGTTCACCAGAAGCTGGTCAAGTCTCTGTCGTCGTCGCACGCGCCGCTCCGGCAGGCGGCGCTGCAGGGCTGCCTGCTGCAGCTGTCGCAGCGCCCGCCCGCGCCCTGCCACGACCTCGTCGCGCAGCTCGACGTCGCCGTCAGACAATACCTGCCCAGGAACAACAGGATATCTGTTTACGAGCAGAGCTTGTACTGGACCGTCCTGTTCGCGCTGGTCGAACTCGGACACCCCGACCTCGTGAACATCGCCGTGGACTTCGTGCTCACCGACCCCACCCACTACTGCACCGAGCTAGTCGTCAGGGGCATCGCGAGTGCGCTGAGGAATCAAGTCCTCCCCAAGCAGCTCCGTAGCGCCGCGGTGGACAAGTTCCTGGGCAGCACCGACAGCCGCGCGGAACGACACGTCGTGCTGATATTGATGCTGCATCTGTTTACTGTAGACGACAAGCTGTTGAACTCGAAGAACGCGACCGACGTGTCCAACATGGATCCCGACGTGCTGATGACGTCAATGGAACGCATAACGCTGCTCTACAAAACCCTGAAGCAGACTAAAGAAAGGGAGAGCAAGAGAATAATTGTAGCGGCCCTCAAATATTTCCTGAGGGAGACTCTACCGCCGGCCGCCACGTTGAGTAGAGTCGTCCTAGAGTTTTTGGACTGGTGTAGAGACGCGGAAAGGTTAAATGCCGGCGTTTTATCGGACAGAGATAGATTTATCGAGTGCTCGGTCATGAATGCTGAAGTTGTTTTTGAGGTGTTCGAAGCGTCGATAGCGCTGGAACAGCTGCCGGTACTGAGCGGCTGGACGTTCGAAGCGCTGGGGCACCTGTTGAGCGACAAGCTGTCGGCGGGCGTGACGCCGCACGCGCTACTGACGCTGCTAGTGGCGGCCAGTGCCTCCCCCCTCACCCGCGCCGCCGCCCCGCTCACCCGCGCCGCCCTGCACGCCGGCCTGCGGGCGCGCACGCACGCCGACCCCGCGCCCCCCGCCGACCTGCCCTACGCAGACAAGCGGCTGCTGTGCGTCGTCGCCACGCACTCTGACTACACCACCGCCCAACTAGAAAAACTAAAGGAGCTGTGCGAGCGAAACGAACGCCTGCAAGATTTAACGGCATATGCTGTATGCGCTGCTGAATGTGGCGTACACAACTCGAGATTTAGATAG

Protein

MLEPKAGTGLAARVALLSCVIHTSGAFSQPGQWCWAASQLIALTGPQHARLTQYSAAGRPLLTALSACLCVLDGFDGLQELSTVHQKLVKSLSSSHAPLRQAALQGCLLQLSQRPPAPCHDLVAQLDVAVRQYLPRNNRISVYEQSLYWTVLFALVELGHPDLVNIAVDFVLTDPTHYCTELVVRGIASALRNQVLPKQLRSAAVDKFLGSTDSRAERHVVLILMLHLFTVDDKLLNSKNATDVSNMDPDVLMTSMERITLLYKTLKQTKERESKRIIVAALKYFLRETLPPAATLSRVVLEFLDWCRDAERLNAGVLSDRDRFIECSVMNAEVVFEVFEASIALEQLPVLSGWTFEALGHLLSDKLSAGVTPHALLTLLVAASASPLTRAAAPLTRAALHAGLRARTHADPAPPADLPYADKRLLCVVATHSDYTTAQLEKLKELCERNERLQDLTAYAVCAAECGVHNSRFR

Uniprot

A0A2H1W331 A0A2W1BKA8 A0A3S2P5B6 A0A194QI40 A0A212EL19 T1IW53 + More
A0A1S3ILB0 A0A0C9QYY7 A0A0C9Q4L0 F4W9A2 A0A151I0F7 A0A158P153 A0A0N0BHX5 A0A151J3J2 A0A195F459 D6X048

Pubmed

28756777 26354079 22118469 21719571 21347285 18362917 + More
19820115

EMBL

ODYU01005942 SOQ47356.1 KZ150122 PZC73160.1 RSAL01000019 RVE52786.1 + More
KQ458761 KPJ05182.1 AGBW02014148 OWR42184.1 JH431607 GBYB01009019 JAG78786.1 GBYB01009018 JAG78785.1 GL888002 EGI69284.1 KQ976664 KYM78298.1 ADTU01001047 KQ435739 KOX76868.1 KQ980275 KYN17022.1 KQ981855 KYN34869.1 KQ971365 EFA10047.2

Proteomes

UP000283053 UP000053268 UP000007151 UP000085678 UP000007755 UP000078540 + More
UP000005205 UP000053105 UP000078492 UP000078541 UP000007266

Pfam

PF12372 DUF3652 + More
PF02985 HEAT

Interpro

IPR028426   Huntingtin_fam        + More
IPR024613   Huntingtin_middle-repeat
IPR011989   ARM-like
IPR021133   HEAT_type_2
IPR016024   ARM-type_fold
IPR000091   Huntingtin
IPR000357   HEAT

SUPFAM

SSF48371 SSF48371

Gene 3D

1.25.10.10

ProteinModelPortal

A0A2H1W331 A0A2W1BKA8 A0A3S2P5B6 A0A194QI40 A0A212EL19 T1IW53 + More
A0A1S3ILB0 A0A0C9QYY7 A0A0C9Q4L0 F4W9A2 A0A151I0F7 A0A158P153 A0A0N0BHX5 A0A151J3J2 A0A195F459 D6X048

PDB

6EZ8 E-value=0.0936459, Score=84

KEGG

101746788 K04533 huntingtin | (RefSeq) huntingtin

GO

GO:0005634 GO:0005737 GO:0016021

PANTHER

PTHR10170

Length:

474

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22861

Exp number, first 60 AAs:

0.08453

Total prob of N-in:

0.00558

outside

1 - 474

Pi

206.119825

Theta

25.88518

Tajima's D

1.962106

CLR

0.374279

CSRT

0.87735613219339

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics