Gene

KWMTBOMO15735

Pre Gene Modal

BGIBMGA002324

Annotation

PREDICTED:_sodium-coupled_monocarboxylate_transporter_1_[Bombyx_mori]

Location

Bomo_Chr26(+):8008677-8052705      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.973

CDS

ATGAAGCCAGGATGGTTAGCATGGGAGTGTATAGTGTTCGCTATGTTTGTGTGTTCAACCTCCTGCGCCCCGCTGTGGCGTAGGCGAAGAGATGCTGCGGCCGGTGGCAGTGCCAAGAGAGCATACATCTTCGCGGGCACCGGAGTGTCAACTTTAGCTATGATACTATCGGTGGCTAGAGGAACGCTAGGGGTTCGATCGTTTTTAGGGTTTCCGTCGGAGCAAGTATACCGAGGGTCAGCTATGTGGGAAACGCTTTTTGGCATGGTGCTAGCGTTTCCCATAGTTTGCTGGATCTTCGTCCCGGTCTATTACAGGCTATCAACTAATTCCGTTTATGAATATTTGGAGATGCGTTTCGGTTCGATTTGGGTTCGGCGCATAGCCGCAGCAACTTTTCTCCTCCGGCAAGTTTTGAATCTGGCCGTGACGGTCTACACTCCAACAGTGGCCCTTCATGCTGTACTGGCACTACCACACTGGGCGTCAGCAGCTGCACTGACCGTCGTTAGCATCGTTTTCAATTTACTCGGCGGGCTTGCAGCTGCTATTAGAGCTGATGTCATTCAGACTTTGACCATGATACTCGTGAGTGGAGCTTTCATAGTTCAAGCGACAGTGAAAGCTGGTGGTCCGGCAACGGTGTTTAATGGCAATCTAGAAGGCGGGAGACTTAAGTTTTTCCAATTCACGTGGGACCCGACCGTTAGAGTGGACACACTATCCGCCATTATCGGGCAGCTATTCATGTCCATATCCATCTATGGATGCCAGCAGACTTTTGTCCAGCGTTACTGCTCCATGTCCAGCGAATCCAGGGTCAAGAAAACTCTCCTGGCCAACGTTCCTGCCGTTTCGGTGCTCTTCAGTTTGTCTTGGATCGTAGGCATGGCGCTATATGCTGTGTACAAATACTGTGATCCACTGGCCACAAGCAAAATTTCGGCCCCCGATGAAATCCTGCCATTTTACGTACAAGACCAATTTGGTTTTCTACCAGGGATGTTGGGACTGTTTCTGGGCAGTCTTTTCAATGGCGCTTTGAGTTTCCTGGTATCAAACGTTAATTCCTTATCCACAGTCACATGGGAGGATTTTGTATCCGCTGCTCCGTCTTTTAAAGGAATCAGTGATAAGCAACAGCTTACTATCATTAAAATCATTGGGGTAATCTATTCGATCGTCATAATGTGCTTGTCTCTCTGCGTGGGCATGGCTGGTGGCGTAGTCGAAGGCTCCCTACTAGTGACGTCAGCCACGTCCGGAGCACTCTTAGGAGTGTTTGTCCTGGCAGCTCTGTGTCCGGCTGCTAACGGTACGGGCGCGGTATGGGGAATGATCGCTTCGCACATTATAACGACCTGGATGGCTGTTGGAAGGCTCTTGTATGTGAAAAAGAATATAGCCATGCTGCCTACTTCGGTCGAGGGCTGCACGAACACAACGCTCAATTACCTGAGTCGGCCCGTGGGCATCAACCAGACCCTGGCCAAACTAGCACCCCTGCTCCAATCTATGAACATCAGCCTAACAGAAATACGTCCACCGGAATCGTTCATTATGTCCAACCTTCACAAGATGTATTCAATCTCGTATATGTGGTACGCTGTTATCGGCACAGTCACCTGCGTGACGATAGGCGTGATCATCAGCCTCCTGACTTGGAAGGAAACGGACAGATACGACGAGAAGCTCCTACACCCGCTTGTAGCGAAACTGAGCAGGAAACTACCGGGCAGGATTCGTACGTTACCGATCGAGAAGTCTAATATAGAGGTGAAAGAGGACAAGGAAAGTTCAGAGAAGACTGACCAGACTGTAGTGGATGCGAAGCCTACGGTTTTCGCCACTACCAGCAGCAGACTGTTTGAGGCTTACGAAGTCAGAAGATCGCCTTCTCCTGCTCGGACGCGTTTATGA

Protein

MKPGWLAWECIVFAMFVCSTSCAPLWRRRRDAAAGGSAKRAYIFAGTGVSTLAMILSVARGTLGVRSFLGFPSEQVYRGSAMWETLFGMVLAFPIVCWIFVPVYYRLSTNSVYEYLEMRFGSIWVRRIAAATFLLRQVLNLAVTVYTPTVALHAVLALPHWASAAALTVVSIVFNLLGGLAAAIRADVIQTLTMILVSGAFIVQATVKAGGPATVFNGNLEGGRLKFFQFTWDPTVRVDTLSAIIGQLFMSISIYGCQQTFVQRYCSMSSESRVKKTLLANVPAVSVLFSLSWIVGMALYAVYKYCDPLATSKISAPDEILPFYVQDQFGFLPGMLGLFLGSLFNGALSFLVSNVNSLSTVTWEDFVSAAPSFKGISDKQQLTIIKIIGVIYSIVIMCLSLCVGMAGGVVEGSLLVTSATSGALLGVFVLAALCPAANGTGAVWGMIASHIITTWMAVGRLLYVKKNIAMLPTSVEGCTNTTLNYLSRPVGINQTLAKLAPLLQSMNISLTEIRPPESFIMSNLHKMYSISYMWYAVIGTVTCVTIGVIISLLTWKETDRYDEKLLHPLVAKLSRKLPGRIRTLPIEKSNIEVKEDKESSEKTDQTVVDAKPTVFATTSSRLFEAYEVRRSPSPARTRL

Similarity

Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.

Uniprot

A0A2A4K6R0   A0A2W1BKY4   A0A194QJT4   H9IYJ0   A0A212EH53   A0A2H1WF29   + More
S4PG51   A0A3S2N668   A0A1Q3FPC8   A0A1Q3FP13   B0W5X1   A0A2M4BGH3   A0A2M4BH38   A0A336LQ40   A0A182R603   A0A2M3YYV2   A0A2M3YYR5   A0A084W5H1   A0A182M285   A0A0T6BHG4   A0A182NS24   A0A2M4A1K2   W5J713   A0A2M4A165   D6X0X6   A0A182J792   A0A182YB68   A0A182VZE0   Q17HV6   A0A182V813   A0A182FQ25   A0A182L9T5   Q7PXX1   A0A182HLE9   A0A182WSJ7   A0A0C9QWN5   A0A1Y1LEB8   E2C717   A0A182TVZ2   A0A182PGL8   U4UEV5   A0A0J7L2S0   F4X723   A0A182GFW0   A0A232FEK9   A0A182K018   A0A1J1HNB9   E9IVB9   A0A182QU24   A0A195DK21   A0A195FJ08   K7IU91   A0A088AGB8   A0A151XHC6   E2A500   A0A2A3EPE9   A0A1W4X697   A0A026WHY4   A0A1W4UAZ8   A0A2J7RFS4   A0A3B0KG79   B4G3Q0   A0A195C0N7   A0A3B0JJX3   B3MSQ7   Q298F5   B4MC07   A0A0P8XE45   A0A0K8U1G8   A0A0M3QXJ9   A0A195B0I7   A0A0M9A9W7   A0A2M3YZ90   A0A0A1WRY5   B4PM18   B4K597   Q7K3Q2   A0A1L8DES3   B3P3A8   W8BY77   A0A158NDB7   B4QTY8   B4I250   A0A1L8DEY9   B4NFZ7   A0A1B6G4A6   A0A1B0CBU0   A0A1S4F253   A0A1B6HXP6   A0A182G6Y5   A0A1B6IMK7   Q17HV7   A0A1B0GAB6   A0A1B6CB84   B4JV34   A0A0L7RJF8   A0A154PI07   A0A310S9B8   A0A0A9ZGA3   B0W5X4  

Pubmed

28756777    26354079    19121390    22118469    23622113    24438588    + More
20920257    23761445    18362917    19820115    25244985    17510324    20966253    12364791    28004739    20798317    23537049    21719571    26483478    28648823    21282665    20075255    24508170    30249741    17994087    18057021    15632085    23185243    25830018    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    21347285    25401762    26823975   

EMBL

NWSH01000072    PCG79955.1    KZ150018    PZC74941.1    KQ458761    KPJ05175.1    + More
BABH01020722    AGBW02014970    OWR40800.1    ODYU01008262    SOQ51695.1    GAIX01003782    JAA88778.1    RSAL01000325    RVE42526.1    GFDL01005707    JAV29338.1    GFDL01005771    JAV29274.1    DS231845    EDS35958.1    GGFJ01002976    MBW52117.1    GGFJ01002977    MBW52118.1    UFQT01000111    SSX20196.1    GGFM01000692    MBW21443.1    GGFM01000658    MBW21409.1    ATLV01020636    KE525303    KFB45465.1    AXCM01000994    LJIG01000235    KRT86705.1    GGFK01001197    MBW34518.1    ADMH02002100    ETN59188.1    GGFK01001202    MBW34523.1    KQ971372    EFA09536.1    CH477245    EAT46233.1    AAAB01008987    EAA00973.4    APCN01000896    GBYB01000118    GBYB01000119    GBYB01000120    GBYB01000121    JAG69885.1    JAG69886.1    JAG69887.1    JAG69888.1    GEZM01061795    GEZM01061794    GEZM01061793    JAV70315.1    GL453255    EFN76289.1    KB632063    ERL88445.1    LBMM01001017    KMQ97062.1    GL888828    EGI57635.1    JXUM01060500    KQ562105    KXJ76677.1    NNAY01000338    OXU29092.1    CVRI01000010    CRK89018.1    GL766194    EFZ15458.1    AXCN02000264    KQ980800    KYN12834.1    KQ981560    KYN39969.1    AAZX01006375    KQ982130    KYQ59814.1    GL436778    EFN71487.1    KZ288200    PBC33580.1    KK107199    QOIP01000009    EZA55610.1    RLU18719.1    NEVH01004410    PNF39682.1    OUUW01000007    SPP82648.1    CH479179    EDW24371.1    KQ978379    KYM94412.1    SPP82647.1    CH902623    EDV30297.1    KPU72780.1    KPU72781.1    CM000070    EAL28000.2    KRT00372.1    CH940656    EDW58628.1    KRF78368.1    KRF78369.1    KRF78370.1    KPU72782.1    GDHF01031968    GDHF01018179    GDHF01010176    JAI20346.1    JAI34135.1    JAI42138.1    CP012526    ALC46063.1    KQ976690    KYM77993.1    KQ435706    KOX80190.1    GGFM01000815    MBW21566.1    GBXI01013089    JAD01203.1    CM000160    EDW95950.1    KRK02808.1    CH933806    EDW15097.1    KRG01361.1    KRG01362.1    KRG01363.1    KRG01364.1    KRG01365.1    KRG01366.1    KRG01367.1    AE014297    AY058425    AAF55596.1    AAL13654.1    GFDF01009138    JAV04946.1    CH954181    EDV48560.1    GAMC01008295    GAMC01008294    GAMC01008293    JAB98261.1    ADTU01012549    ADTU01012550    CM000364    EDX12411.1    CH480820    EDW54607.1    GFDF01009137    JAV04947.1    CH964251    EDW83214.2    GECZ01012499    JAS57270.1    AJWK01005824    AJWK01005825    AJWK01005826    AJWK01005827    AJWK01005828    GECU01036461    GECU01028291    GECU01012342    GECU01010967    JAS71245.1    JAS79415.1    JAS95364.1    JAS96739.1    JXUM01149218    KQ570728    KXJ68314.1    GECU01032882    GECU01019562    GECU01014578    GECU01002370    JAS74824.1    JAS88144.1    JAS93128.1    JAT05337.1    EAT46232.1    CCAG010002699    GEDC01026699    GEDC01009522    JAS10599.1    JAS27776.1    CH916374    EDV91354.1    KQ414581    KOC70928.1    KQ434902    KZC11124.1    KQ763446    OAD55073.1    GBHO01002604    GBHO01002603    GDHC01015740    GDHC01011490    GDHC01007398    JAG41000.1    JAG41001.1    JAQ02889.1    JAQ07139.1    JAQ11231.1    EDS35961.1   

Proteomes

UP000218220    UP000053268    UP000005204    UP000007151    UP000283053    UP000002320    + More
UP000075900    UP000030765    UP000075883    UP000075884    UP000000673    UP000007266    UP000075880    UP000076408    UP000075920    UP000008820    UP000075903    UP000069272    UP000075882    UP000007062    UP000075840    UP000076407    UP000008237    UP000075902    UP000075885    UP000030742    UP000036403    UP000007755    UP000069940    UP000249989    UP000215335    UP000075881    UP000183832    UP000075886    UP000078492    UP000078541    UP000002358    UP000005203    UP000075809    UP000000311    UP000242457    UP000192223    UP000053097    UP000279307    UP000192221    UP000235965    UP000268350    UP000008744    UP000078542    UP000007801    UP000001819    UP000008792    UP000092553    UP000078540    UP000053105    UP000002282    UP000009192    UP000000803    UP000008711    UP000005205    UP000000304    UP000001292    UP000007798    UP000092461    UP000092444    UP000001070    UP000053825    UP000076502   

PRIDE

H9IYJ0    Q7K3Q2   

Pfam

PF00474   SSF

Interpro

IPR038377   Na/Glc_symporter_sf        + More
IPR001734   Na/solute_symporter       
IPR036739   SLC41_membr_dom_sf       

SUPFAM

SSF161093   SSF161093       

Gene 3D

1.20.1730.10    

ProteinModelPortal

A0A2A4K6R0   A0A2W1BKY4   A0A194QJT4   H9IYJ0   A0A212EH53   A0A2H1WF29   + More
S4PG51   A0A3S2N668   A0A1Q3FPC8   A0A1Q3FP13   B0W5X1   A0A2M4BGH3   A0A2M4BH38   A0A336LQ40   A0A182R603   A0A2M3YYV2   A0A2M3YYR5   A0A084W5H1   A0A182M285   A0A0T6BHG4   A0A182NS24   A0A2M4A1K2   W5J713   A0A2M4A165   D6X0X6   A0A182J792   A0A182YB68   A0A182VZE0   Q17HV6   A0A182V813   A0A182FQ25   A0A182L9T5   Q7PXX1   A0A182HLE9   A0A182WSJ7   A0A0C9QWN5   A0A1Y1LEB8   E2C717   A0A182TVZ2   A0A182PGL8   U4UEV5   A0A0J7L2S0   F4X723   A0A182GFW0   A0A232FEK9   A0A182K018   A0A1J1HNB9   E9IVB9   A0A182QU24   A0A195DK21   A0A195FJ08   K7IU91   A0A088AGB8   A0A151XHC6   E2A500   A0A2A3EPE9   A0A1W4X697   A0A026WHY4   A0A1W4UAZ8   A0A2J7RFS4   A0A3B0KG79   B4G3Q0   A0A195C0N7   A0A3B0JJX3   B3MSQ7   Q298F5   B4MC07   A0A0P8XE45   A0A0K8U1G8   A0A0M3QXJ9   A0A195B0I7   A0A0M9A9W7   A0A2M3YZ90   A0A0A1WRY5   B4PM18   B4K597   Q7K3Q2   A0A1L8DES3   B3P3A8   W8BY77   A0A158NDB7   B4QTY8   B4I250   A0A1L8DEY9   B4NFZ7   A0A1B6G4A6   A0A1B0CBU0   A0A1S4F253   A0A1B6HXP6   A0A182G6Y5   A0A1B6IMK7   Q17HV7   A0A1B0GAB6   A0A1B6CB84   B4JV34   A0A0L7RJF8   A0A154PI07   A0A310S9B8   A0A0A9ZGA3   B0W5X4  

PDB

5NVA     E-value=3.06817e-18,     Score=227

KEGG

101746227    K14388 solute carrier family 5 (sodium-coupled monocarboxylate transporter), member 8/12 | (RefSeq)

GO

GO:0016021   GO:0022857   GO:0008324   GO:0016020   GO:0005215   GO:0006810   GO:0004935   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259   GO:0055085  

Length:

639

Number of predicted TMHs:

13

Exp number of AAs in TMHs:

287.65831

Exp number, first 60 AAs:

41.25182

Total prob of N-in:

0.00185

POSSIBLE N-term signal

sequence

outside

1  -  4

TMhelix

5  -  27

inside

28  -  39

TMhelix

40  -  62

outside

63  -  81

TMhelix

82  -  104

inside

105  -  123

TMhelix

124  -  146

outside

147  -  160

TMhelix

161  -  183

inside

184  -  187

TMhelix

188  -  207

outside

208  -  234

TMhelix

235  -  257

inside

258  -  277

TMhelix

278  -  300

outside

301  -  329

TMhelix

330  -  352

inside

353  -  387

TMhelix

388  -  410

outside

411  -  414

TMhelix

415  -  437

inside

438  -  441

TMhelix

442  -  464

outside

465  -  532

TMhelix

533  -  555

inside

556  -  639

 

 

Pi

311.205764

Theta

188.021129

Tajima's D

1.992742

CLR

0.211184

CSRT

0.87995600219989

Interpretation

Uncertain