SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15733
Pre Gene Modal
BGIBMGA002321
Annotation
PREDICTED:_dedicator_of_cytokinesis_protein_1_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.558 Nuclear   Reliability : 1.436
 

Sequence

CDS
ATGACTGTTTGGCGAAAATTAGAAAATGAAGAATGCTATGCCGTTGCAATATACAATTTCACAAGCAAATCCCAGTCGCATCTCCCTTTGGAAGTGGGCGAGCTCATTCATCTCGAAGGTGAAACGGAAGAGTGGTATTGCGGTCAGAGTCTCCGGAGGGACCTCAAAGGCGCCTTCCCAAAAAGTTATGTCGTCAAGAGGGATTGCGTTGTTGACAGATGCAGCGAAAGTGTAGTGGCTTCAGCTGGCGGCTATGGCGTCGTTCACGATATCGCGGTGACATTGCGAGACTGGTTAGAACAATGGAAGAACTTGTATATTAATAATGATGAACGTTTTAAATTTATGGAAGTAAGTATGCGTGCGTTATTAGAGCTAAGAGCTCAGGCCGCCAGCGGAGCGCTTCCTCAAGACCAGCTGCGAAGAGTCGCCAGGACATCTGTATTCACTATCGACAGGGGAAATAGGACGCTAGATATGGAGTTGGCGGTGAGGAATTCAAACGGTCAACTCGTCGATCCGCTGAAGATGTCGACGTACCGTTTGAACGCATTACACGACGAGGCCAACACTCGTATCGATAAAAACATGGAAACGACGCCGGTAACACCGAACGTTACTCCGGCCGGAGTGAGGACGTTCACGGTTTGCGTCCGAGTGCACAACTTCGTGTGTCGAGTGGCGGACGTGGCCGAGCTGTCGCTGTCCTTGCACGACGCGGCCGGGAACAAGTTGACTGAACATCTCCTGATAAGATGGCCCACGCCAAATTTCGCGACCACCAATGTCGTCTTCACGGATTTCGGCAGTGACTTCATGAAGAACGAGAAAGTGTATTTAGTGTGTCACGTCGTGAGAATAGGGTCGATGGACGCTCAAAATGTTGATCACAGGCGCAGTTCAGTGGCCCAGCCGGTGTCGATGAGCACGTCGGCCGGCGCGATGCGGAGGCCGTTCGGCGTGGCCTGCGCCGACATCAAGCGCCACCTCACGTCTGATAACCCTGACAAGCACATACAAGTGCCTTTTTACGCATACGAAAAAGAGAATTTAGATGCTCTGCTGAAGAAGGTGATGGCCAACCGGGAGTTGAAGGACGCCAAGCACTCGCAAGGACTCTGGGTCTCCATACATCTAGTTGAAGGTGATTTAAAACAGATCCGCGAAGAGAATCCGCACATAGTGGTGAACACGGTGGTGGCACGGAAGATGGGCTTCCCCGAAGTGATACTGCCGGGGGACGCGCGCAACGACCTCTACGTGACCCTCTGCTCCGGCTCGTTCTCCAAGGGTGGCGGGAAGTCTTCGGAGAGGAACATCGAGCTGGTGGCCAGGGTTGTTGATCAACACGGGAGAACCATACCGGGTGTGATTTCGATTGGAGCTGGCGTACCGTTAGCTAACGAGTACACTTCGCTTGTGTACTACCATGACGACAGGCCGCGATGGCAGGAAGTGTTTAAGGTGTGTCTGAACATTGAGGAGTTCAAAGACGCTCACCTGGTGTTCCTGTGCAGACACCGGAGCTCGAACGAAGCCAAGGACCGGGCGGAGAGGCATTTCGCGTTAGCCTTCCTCAGGCTCATGCAGCGCGAAGGGACCACGACGCCCGACACCAACCACAACCTGTGCGTTTACAAAATTGACAACAAAAGGTCGAACCCCGCCGAGGTGGAGAAAGAAGCGGCCGCGGTCTGCCTGGGGCTGCCTTCGAAACGGGACGAGCTCCCGGCCGGCGCCGAGCGGGGCCTGACCCGCGGCGTGCTGTCCCTCATACACCGGGACACGCTCACCGTCGCCACCAAGCTGTGCTCCACTAAACTGACGCAGAAAGAGGAAATCCTCGGTGTTCTGAAATGGAGCACGCATCGGACGCCTGGGACATTGCGGCCGGCCTTGACCCAGCTGCTCCACGTCCCGAGCGAAGAGCTGGTCAAGTTCCTCCAGGACATACTGGACACGTTGTTCAGCATACTGACGCAGGTCGAAGAAGACCAAGAATATTATTCGGACAAGAGCTACGGCGTTCTAGTGTTTGAATGCCTGCTGAGGGTCATATCGCTGGTCGCCGATCACAAGTACCAGCATTTCCAGCCAGTTCTGCACGTTTACATAGACGAGAGCTTCTGCGACGCTTTGGCTTACGAGTCCCTGATAACGGTGATGGTGTGGGTGATCCGGACCGCGAACAGCAGCGAGGCGGCCGTCAAGCGCCTGCTGGTCTGCATGAAGTGCGTCGAGAGTCTGCTGCGGCTGGTGGTGCGCTCAAGGCAACTCCGCAGCGCTCTGGGCGACAGCGCTGCTGACGACGGCTTCAAGGCGCTATTCGATACGCTTCTAGAAGCGCTAGTGTGGCTGATGCGGTGCGGCGAGCACGTGCTCACGTGTCAGGGATCCGCGCTGAAGTACTTCCCGCACGCGGTGCCGCACATCATCAAAGTGTACCCGGACACAGAGCTCTGCGCATACATAATCCGTGCATTGGATGCGTTGCCCCTTTGTCGTCTCGGCACTCAAAGGATGCTGGCGTTACTAGAGTTGGTCCGTGGACCACTGTGCGCCGCGCCGGCTGCCAGAGCTTTGCTGCTGCCGCATCTCGCAGCCACACTTCGAGCTTTGTTGAGGGATAAAGCCGAGTGGTACCGCGAGACGGCGCTCAAGTTGCGATTGGTTGGCAAGGCAGCGAGACTCCTAGGCGAGGACACTGCGAAACTACACGATCCAACGCATCACCAGCAAATCGTGGAACTCTGCGTGGAAACCTTAGGCGAGGTGTTGACGCTACTCGCTCGCGATGACGTGGGGCCCGTCGAGAATGATCGAGCGGAATTAGCTAGAAGACTACTGCCCACAGTGCTGAAAACGGCCACCGTGATGATCCAAGAGAGGGGGACCGAGGAACATCCTAGTTCGTCCAATGAGAACATTGTTCGACGAATAGTTTCGGTACTGGTCGACATGGTGCGACAAATGTCCGAAGATCAGTATTCTATGGTGGTGAAAGCGCTTGAAGTGGAAAATGCCGGCGGATCGGGCTCCCTAGTCGACGACGCGCTGGGCCTGATAGTGATGTTGGTTCAGCGACCGGTGTTCAGACCGCACTGGGCGGATATGCTACATCTACAGCATTACGTGATGCTTCATGCTCTGAGGCTGCTGTCAACGACCATTCAAGACCGCCTCAACACGGCCGAAGACACGGAGTCACTGGCCAAAGTCCGCGCACAATGCAAGGCCTGGTTCAGTGCCGGGGCGGCCCTGGGCACGTCGGCGCCTCTCCAGCTCGAGACCTTGACCGCAGCGAGGAAACAACGCGTCAAGCAACTGTACGGGGACATAAGAAGGGGCTTAGCGCAATGCCTCAGCGACATGTGGTACAGCTTGGATGCCGCCAAGATAACACTAGACAAATAA
Protein
MTVWRKLENEECYAVAIYNFTSKSQSHLPLEVGELIHLEGETEEWYCGQSLRRDLKGAFPKSYVVKRDCVVDRCSESVVASAGGYGVVHDIAVTLRDWLEQWKNLYINNDERFKFMEVSMRALLELRAQAASGALPQDQLRRVARTSVFTIDRGNRTLDMELAVRNSNGQLVDPLKMSTYRLNALHDEANTRIDKNMETTPVTPNVTPAGVRTFTVCVRVHNFVCRVADVAELSLSLHDAAGNKLTEHLLIRWPTPNFATTNVVFTDFGSDFMKNEKVYLVCHVVRIGSMDAQNVDHRRSSVAQPVSMSTSAGAMRRPFGVACADIKRHLTSDNPDKHIQVPFYAYEKENLDALLKKVMANRELKDAKHSQGLWVSIHLVEGDLKQIREENPHIVVNTVVARKMGFPEVILPGDARNDLYVTLCSGSFSKGGGKSSERNIELVARVVDQHGRTIPGVISIGAGVPLANEYTSLVYYHDDRPRWQEVFKVCLNIEEFKDAHLVFLCRHRSSNEAKDRAERHFALAFLRLMQREGTTTPDTNHNLCVYKIDNKRSNPAEVEKEAAAVCLGLPSKRDELPAGAERGLTRGVLSLIHRDTLTVATKLCSTKLTQKEEILGVLKWSTHRTPGTLRPALTQLLHVPSEELVKFLQDILDTLFSILTQVEEDQEYYSDKSYGVLVFECLLRVISLVADHKYQHFQPVLHVYIDESFCDALAYESLITVMVWVIRTANSSEAAVKRLLVCMKCVESLLRLVVRSRQLRSALGDSAADDGFKALFDTLLEALVWLMRCGEHVLTCQGSALKYFPHAVPHIIKVYPDTELCAYIIRALDALPLCRLGTQRMLALLELVRGPLCAAPAARALLLPHLAATLRALLRDKAEWYRETALKLRLVGKAARLLGEDTAKLHDPTHHQQIVELCVETLGEVLTLLARDDVGPVENDRAELARRLLPTVLKTATVMIQERGTEEHPSSSNENIVRRIVSVLVDMVRQMSEDQYSMVVKALEVENAGGSGSLVDDALGLIVMLVQRPVFRPHWADMLHLQHYVMLHALRLLSTTIQDRLNTAEDTESLAKVRAQCKAWFSAGAALGTSAPLQLETLTAARKQRVKQLYGDIRRGLAQCLSDMWYSLDAAKITLDK

Summary

Similarity
Belongs to the DOCK family.
EMBL
KZ150018    PZC74940.1    KQ458761    KPJ05174.1    KQ414581    KOC70964.1    + More
GEZM01099152    JAV53458.1    KZ288191    PBC34461.1    KQ434902    KZC11159.1    KQ759821    OAD62690.1    PYGN01000176    PSN51994.1    KK852498    KDR22579.1    QOIP01000007    RLU19995.1    KK107213    EZA55286.1    GL888498    EGI59998.1    ADTU01012179    ADTU01012180    ADTU01012181    KQ976558    KYM80665.1    KQ977012    KYN06402.1    GEZM01099151    GEZM01099148    GEZM01099144    JAV53459.1    GEZM01099150    JAV53460.1    GEZM01099147    GEZM01099145    GEZM01099143    JAV53463.1    GL435551    EFN73187.1    KQ971371    EFA10254.2    KYB25596.1    KQ981744    KYN36389.1    GEDC01030838    JAS06460.1    NEVH01009765    PNF32870.1    GL446009    EFN88587.1    GEDC01012723    JAS24575.1    PNF32871.1    KQ981135    KYN09246.1    ABLF02022160    GEDV01007929    JAP80628.1    GFPF01007130    MAA18276.1    GACK01005409    JAA59625.1    GEFM01004460    GEGO01002417    JAP71336.1    JAR92987.1    GEFH01001865    JAP66716.1    KP100156    AKO62846.1    AAZO01002923    DS235231    EEB13669.1    KB632204    ERL90099.1    APGK01043404    KB741014    ENN75463.1    AKO62845.1    LBMM01000472    KMQ98259.1    GGFM01001436    MBW22187.1    GGFJ01000113    MBW49254.1    KK854560    PTY16871.1    GGFJ01000112    MBW49253.1    LJIG01009602    KRT82752.1    GGFL01003384    MBW67562.1    ABJB010131106    ABJB010191271    ABJB010349701    ABJB010747103    ABJB010816281    ABJB010870676    ABJB010919045    ABJB010939443    ABJB011013157    ABJB011087767    DS665503    EEC03304.1    GBHO01019397    JAG24207.1    CVRI01000064    CRL05399.1    GGFL01003414    MBW67592.1    GBHO01003214    JAG40390.1    ADMH02001587    ETN61959.1    GGFK01001712    MBW35033.1    GGFL01005620    MBW69798.1    ACPB03007651    GDIQ01224526    JAK27199.1    GFDF01006454    JAV07630.1    GDIQ01018373    JAN76364.1    GL732531    EFX86015.1    GGFJ01000128    MBW49269.1    GDIP01237307    JAI86094.1    GDIP01167160    JAJ56242.1    GDIP01037433    JAM66282.1    CRL05400.1    GDIP01133225    JAL70489.1    LRGB01001574    KZS11673.1    GBHO01003217    JAG40387.1    GDIP01147664    JAJ75738.1    GDIP01163161    JAJ60241.1    GBHO01003215    JAG40389.1    GDIQ01145102    JAL06624.1    MNPL01012059    OQR72305.1    GBBI01002984    JAC15728.1    GDHF01005453    JAI46861.1    GAMC01020653    JAB85902.1    CM004478    OCT71603.1    NBAG03000436    PNI24637.1    CM004479    OCT69949.1    GDHF01018421    GDHF01004022    JAI33893.1    JAI48292.1    NEDP02000770    OWF55042.1    KA644648    AFP59277.1    LSYS01003057    OPJ84061.1    GFAC01003802    JAT95386.1    AAMC01014969    AAMC01014970    AAMC01014971    AAMC01014972    AAMC01014973    AAMC01014974    AAMC01014975    AAMC01014976    AAMC01014977    AAMC01014978    AQIB01042219    AQIB01042220    AQIB01042221    AQIB01042222    AQIB01042223    AQIB01042224    AKHW03001049    KYO43900.1    MUZQ01000141    OWK56965.1   
Pfam
PF16172   DOCK_N        + More
PF14429   DOCK-C2
PF06920   DHR-2
PF07653   SH3_2
PF14604   SH3_9
PF00018   SH3_1
Interpro
IPR026791   DOCK        + More
IPR001452   SH3_domain       
IPR027007   DHR-1_domain       
IPR035892   C2_domain_sf       
IPR016024   ARM-type_fold       
IPR032376   DOCK_N       
IPR027357   DHR-2       
IPR036028   SH3-like_dom_sf       
IPR010703   DOCK_C       
IPR026799   DOCK_2       
IPR031057   DOCK1_homologue       
IPR030717   DOCK1/DOCK5       
SUPFAM
SSF48371   SSF48371        + More
SSF50044   SSF50044       
Gene 3D
PDB
3L4C     E-value=3.37319e-34,     Score=367

Ontologies

Topology

Length:
1137
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0680199999999999
Exp number, first 60 AAs:
0.00043
Total prob of N-in:
0.00085
outside
1  -  1137
 
 

Population Genetic Test Statistics

Pi
233.036879
Theta
175.749083
Tajima's D
1.271527
CLR
0.354521
CSRT
0.731113444327784
Interpretation
Uncertain
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