SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15728  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002318
Annotation
PREDICTED:_serine_protease_HTRA2?_mitochondrial-like_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 2.33
 

Sequence

CDS
ATGTTTTTCGGTGGAGTAGAGGGAGGAGCAACACACTCGAACCTTGTGATATGCGACGAAGCTGGACGGGTTGTTGGGAGAGCTAAAGGTCTCGGCACGAACCATTGGACTCTTGGAATAGACGGATGCGCCAACAGGATCATAAGCATGCTGCACGAGGCCAAAGAAGACGCAGGGATCCCCAAAGATCAAGCCCTAGATTCTTTGGGTTTGACGTTATCAGGCTGTGAACAAGAAAGCAGCAATGCCGAATTAGTGGCCAGGGTCAAAGACTTAGATCCGATGTGTGCAAAAGCGGTGTATGCGGCGTCCGACACGGCTGGGTCCCTGTTCACTGGAGCACCGGACGGAGGCATGGTTCTTATTGCTGGTACCGGTTCGAATGCACTATTACGTACGTCGGATGGAGAACAACACAACTGCGGTGGCTGGGGACATTTGCTCGGCGACGAAGGTGGAGCTTACTGGATAGCGCATAAAGCCGTGAAATCGGTGATAGATGACGTCGATGGTCTCCGTATCTCTCCATATCCAACGCACAACGTATGGGAAGTGATCAGGGAACATTTCGATGCTGACACCAGAGCGGATCTGCTTCCACACGCCTATAAGAACTTTAATAAATCGCAATTTGCGGGTTTAACGGTAAAGCTATCGGCATTGGCATACAAAGGTGACGAGCTATCGAGGCATATCTTCGCCGAAGCTGGTAGTGCGTTAGCGGCTCACGTGGTTGCGCTGGCCAGACGGAGCACCGCCAAAAGGCTGAGAGTCGTCTGCGTTGGATCGGTGTGGAACAGCTGGGACGTGTTGAAACCGGGAATGCTAAATGAACTTAACGCTAAAAAGGTGAAGTGCGAATTGGAACTGGTACGCTTAAAAGTATCGAGCGCAATGGGAGCGGCCTGGTTGGCGGCTAACAAAATAAACTACGACCTACCGAGAGACGACGAGGCCTTCTGTCAAGTATTCCACAAGTACCGACCAGATGCAGTTAATGGTGATGCGAAGGTCAAACACAACGGTCAAGTTAATGGGAATTTAAACGGTGTCGAAAACTGCGGTATAACGTTAAGTCTCTTGTAA
Protein
MFFGGVEGGATHSNLVICDEAGRVVGRAKGLGTNHWTLGIDGCANRIISMLHEAKEDAGIPKDQALDSLGLTLSGCEQESSNAELVARVKDLDPMCAKAVYAASDTAGSLFTGAPDGGMVLIAGTGSNALLRTSDGEQHNCGGWGHLLGDEGGAYWIAHKAVKSVIDDVDGLRISPYPTHNVWEVIREHFDADTRADLLPHAYKNFNKSQFAGLTVKLSALAYKGDELSRHIFAEAGSALAAHVVALARRSTAKRLRVVCVGSVWNSWDVLKPGMLNELNAKKVKCELELVRLKVSSAMGAAWLAANKINYDLPRDDEAFCQVFHKYRPDAVNGDAKVKHNGQVNGNLNGVENCGITLSLL

Summary

EMBL
KZ150018    PZC74935.1    NWSH01000788    PCG74195.1    KQ458761    KPJ05170.1    + More
GDQN01001845    JAT89209.1    GAIX01011982    JAA80578.1    AGBW02009366    OWR50989.1    KQ460820    KPJ12097.1    GDQN01007314    JAT83740.1    CH964232    EDW81236.1    GDHF01011054    GDHF01010233    JAI41260.1    JAI42081.1    GDHF01025775    GDHF01011580    GDHF01001265    JAI26539.1    JAI40734.1    JAI51049.1    CH954181    EDV48999.1    GDHF01005671    JAI46643.1    CM000160    EDW97466.1    AE014297    AY069061    AAF55174.1    AAL39206.1    JRES01000007    KNC34926.1    GBXI01014542    GBXI01011308    JAC99749.1    JAD02984.1    CM000364    EDX12835.1    CH480815    EDW42066.1    CH902623    EDV30337.1    KPU72804.1    KA645807    AFP60436.1    GDAI01000120    JAI17483.1    GAKP01006838    JAC52114.1    CH940656    EDW58472.1    GFDG01001286    JAV17513.1    GAMC01006256    GAMC01006255    JAC00301.1    CM000070    EAL27742.2    GFDF01001432    JAV12652.1    CH916373    EDV94545.1    OUUW01000013    SPP87775.1    CP012526    ALC47787.1    CH479179    EDW24712.1    CH933806    EDW17003.1    KRG02448.1    AXCN02001229    UFQT01000878    SSX27790.1    JXUM01105531    KQ564974    KXJ71477.1    APCN01001235    APCN01001236    GAPW01001843    JAC11755.1    AAAB01008846    EAA06412.4    GAPW01001842    JAC11756.1    GGFK01004552    MBW37873.1    GGFJ01006935    MBW56076.1    GGFJ01006934    MBW56075.1    GGFM01007456    MBW28207.1    AXCM01000049    GAPW01001841    JAC11757.1    CH477387    EAT42057.1    UFQT01003965    SSX35399.1    NEVH01004410    PNF39663.1    CVRI01000010    CRK88984.1    ADMH02001819    ETN61022.1    SSX27791.1    ATLV01014524    ATLV01014525    KE524974    KFB38863.1    GFDL01010375    JAV24670.1    JXJN01019080    KK852458    KDR23546.1    GFDL01010274    JAV24771.1    KK107390    EZA51376.1    CCAG010021518    EZ423603    ADD19879.1    KQ760549    OAD59903.1    GEZM01062734    JAV69508.1    DS231903    EDS45135.1    KZ288271    PBC29806.1    KQ435812    KOX72719.1    KQ982944    KYQ49056.1    KQ980725    KYN14023.1    KQ976870    KYN07707.1    GL766597    EFZ14978.1    LBMM01000996    KMQ97090.1    KQ981169    KYN45330.1    UFQS01004575    UFQT01004575    SSX16407.1    SSX35719.1    AAQR03102088    AC007881    GEMB01002277    JAS00904.1   
Pfam
PF01869   BcrAD_BadFG        + More
PF17820   PDZ_6
Interpro
IPR039758   NAGK_prok_euk        + More
IPR002731   ATPase_BadF       
IPR001940   Peptidase_S1C       
IPR041489   PDZ_6       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF50156   SSF50156        + More
SSF50494   SSF50494       
PDB
2CH6     E-value=1.44325e-58,     Score=573

Ontologies

Topology

Length:
361
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.10049
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00114
outside
1  -  361
 
 

Population Genetic Test Statistics

Pi
25.344468
Theta
19.831924
Tajima's D
0.162263
CLR
0.736046
CSRT
0.413679316034198
Interpretation
Uncertain
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