SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15722
Pre Gene Modal
BGIBMGA002315
Annotation
PREDICTED:_uncharacterized_protein_LOC106110628_[Papilio_polytes]
Location in the cell
Nuclear   Reliability : 4.353
 

Sequence

CDS
ATGAGTGTACAGGACAGAAATAAAAAACTGGATTGCTTGGATACAGAGGGTGTTGTGAAGTTATTGCAAACATGGGACTTGGTTGAGTTTGTGGACTTCGTTAAAGAAAAACAACTGGATGGACGGAAAATCGCAGATGTTACAGAAGGGATAGTAAAGCTATGGAGACCACAATCTAATGCTAAGAAATTCATTGCATTCCTCGAAGACCTAAAACGCGACCCAGATAAATATTTGATTACAAATGAATCGATCGATGAGAAATCTGAAGCTGAGATGGCTTTAATAGAGAGCCAGTATCAAACAGTTAAAAAAAAGGGTACAGAAGAACTTGTTAACGTTAATAATAGCATCGAAGATTTATTGAAAAAATGGGTACCGGTTAAAAGCTTCCTGTACAGGAACCAACCAAAGCAAATTAATAAGGCCGCACCGTCCTATCTTCCCATGAAGCCTGTATCTCCAAAGCGCTCCAAAAAGTTCTTCAGGCTAAACTCATATGAATATCCATTGTTTGACTTACGTTCGCGGCTTAAGCAAGACACTACGGACAAATACTATCCAATGAAAAGAACAAGCATATTTTACATAAACAAATTATACAAAAGACCCGAATGGGGAACCAAGTACAAATCTATATCGACAACTGAAGAATTTACGGATAAATATGCAGAGGATCATCTTTACGAAGACTTGAATTACAATGAAATACCTGAGAATACTAAAAACTTTGTAAGAGACGACAGAATAAGCAGCTGCAACTTAAATCAGACTTCTAAACCGTGTATGGTTAAAATTCAAGAACTTATCCAATCATTTAGGATGCCGTTTTTTGGTGGCAAAAAGACTGATCCGCTCAATGATGTTGGTTGCGCGGTGGAAAACGGTGTGGATGATAAAGAAACAAACATATATGAGAGCAATGATCCGATGGCAAATATGTATGATTCGGTGCATGTGAACAATGAAAACGTTATTGCAAATCAAAGCGTGAAGACAAAATTACCGGTGGAAGACTATTTAGATCCAGTTCAAATTAACAAAGATTATCTGGACGTTCAGTACAAACAGAAAGACGACTCTATACTCGGTTATATTATGAGTATATTCGAGAACAGATTCGGAATGAAACGAGATACAAACGACGCTCGATCGGAGGGTTCAGATAATGGAAGCGAAGGTGACGTCGCACAGCATGCGCAAAAACCGGAAGACCGTAAGAGTCGGAAAATGGCCGATCGACCTCTTCCGGTTCCGATCGAGAATGAACCTTTTTATATGAACATCGACCGAACCGAAGCCGAAAGCCTATTGAAGGGACAGCCCGATGGGATGTTTGTCCTGAGGCCGTCCAGCCAGCCAAACCACGCGTATACGTTAAGTGTGTCTTGCACTGGAGCAGTGCACAATGTCGGTGTTCGGCGTCGTCAAGATGGCCGCCTCGCGCTCGGCTTTGCTCGACGCGGCGAGCGAAGTTTCACGAGCGTCGCGTCGCTATTACGTCATCACCGTAGGCGGAGGCTGCTTCTGGTTGCCGAGGGCGGAGTGATCGGCGCTACAACTTTAATAGACACACCGCAGTATTATCAAACGCCCAGAAGTATTCCGATTCCAATTTAA
Protein
MSVQDRNKKLDCLDTEGVVKLLQTWDLVEFVDFVKEKQLDGRKIADVTEGIVKLWRPQSNAKKFIAFLEDLKRDPDKYLITNESIDEKSEAEMALIESQYQTVKKKGTEELVNVNNSIEDLLKKWVPVKSFLYRNQPKQINKAAPSYLPMKPVSPKRSKKFFRLNSYEYPLFDLRSRLKQDTTDKYYPMKRTSIFYINKLYKRPEWGTKYKSISTTEEFTDKYAEDHLYEDLNYNEIPENTKNFVRDDRISSCNLNQTSKPCMVKIQELIQSFRMPFFGGKKTDPLNDVGCAVENGVDDKETNIYESNDPMANMYDSVHVNNENVIANQSVKTKLPVEDYLDPVQINKDYLDVQYKQKDDSILGYIMSIFENRFGMKRDTNDARSEGSDNGSEGDVAQHAQKPEDRKSRKMADRPLPVPIENEPFYMNIDRTEAESLLKGQPDGMFVLRPSSQPNHAYTLSVSCTGAVHNVGVRRRQDGRLALGFARRGERSFTSVASLLRHHRRRRLLLVAEGGVIGATTLIDTPQYYQTPRSIPIPI

Summary

Pfam
PF00017   SH2
Interpro
IPR036860   SH2_dom_sf        + More
IPR000980   SH2       
IPR013761   SAM/pointed_sf       
SUPFAM
SSF55550   SSF55550        + More
SSF47769   SSF47769       
Gene 3D
PDB
1RJA     E-value=0.00231705,     Score=98

Ontologies

GO

Topology

Length:
539
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.28228
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01227
outside
1  -  539
 
 

Population Genetic Test Statistics

Pi
244.510182
Theta
162.430185
Tajima's D
1.609321
CLR
0.397837
CSRT
0.810359482025899
Interpretation
Uncertain
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