Gene

KWMTBOMO15710  Validated by peptides from experiments

Annotation

PREDICTED:_actin-binding_LIM_protein_1-like_[Papilio_machaon]

Location

Bomo_Chr26(-):7055895-7067269      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.778

CDS

ATGAATGGCAAAGTGGTGTGCGCATCTTGCGGCGGCAAGTGCAGCGGTGAGGTGCTTCGCGTGTCGGACAAGTACTTCCACACCGCCTGCTTCACGTGCCGCACTTGTTCAGCCTCTCTCGCCAAAGGGGGCTTCTTCTGCAAGGACGGACACTACTACTGCCCGCAGGATTACCAACGCGCGTTTGGCACACGATGCGCAGCCTGCAACCAGTATGTAGAAGGAGAGGTGGTCTCCGCCCTCGGGAATACGTATCATCAGAAATGCTTCACTTGTGCGAGATGCAAGAGAGCGTTCCCGTCGGGTGAGAAAGTGACGTATACAGGAACAGAAGTTGTCTGTTCGAACTGCGTGGCGGTGCCGCAGCGACAGACCGCGAGGACTGCGGCGCCGGCCCCCCTCAGCTCCCCCACTCCGGAGCCACAGCAGAATAATGTTGAACGACGACAGCCAGATCAGAACGAATGCGCTGGTTGCGGTCAAGAATTATCCGAGGGTCAGGCTTTGGTGGCACTAGACAGACAATGGCACACTGGGTGCTTCTCGTGCGGCGAGTGCGGCGCCGTGCTGCAGGGCGAGTACATGGGCCGGGACGGCGTGCCTTACTGCGAGCGAGACTACCAGCGTCTGTACGGAGTGCGGTGCGCGTACTGCCAGCGATACATATCCGGGAAGGTGTTGCAGGCCGGAGAGAATCACCACTTCCACCCGACGTGCGCGCGCTGCAGCAAGTGCGGAGATCCATTCGGCGACGGCGAGGAGATGTTCCTCCAGGGCGCCGCCATCTGGCACCCGCGCTGCGGGCCCGCGCCCCACGACCCGCTCTCCGCCGATAGAGCCTCCTCCGAGTTGCAGTTCTCGCTGCGATCGCGCACACCCAGCGTCAACGGCTCATACTGCAGTCCCTACAGTAGCTTGACTAGAAAGTACGGGTACCGAGCCGTGTCCCCCGGGCTGGTGCTACGCGAGTACCGCGAGGCGGGCGCGTGCAGTCCGCACCGCATCACCACGTACTCGTACCTCACGACGGAGCCTGCGTACCTGCGCCGCCCCGTGCAGCCCTACGACCGCCCGCCCACCTCGCCGCACTTCCACCGCCCGCCCTGTAAGTAA

Protein

MNGKVVCASCGGKCSGEVLRVSDKYFHTACFTCRTCSASLAKGGFFCKDGHYYCPQDYQRAFGTRCAACNQYVEGEVVSALGNTYHQKCFTCARCKRAFPSGEKVTYTGTEVVCSNCVAVPQRQTARTAAPAPLSSPTPEPQQNNVERRQPDQNECAGCGQELSEGQALVALDRQWHTGCFSCGECGAVLQGEYMGRDGVPYCERDYQRLYGVRCAYCQRYISGKVLQAGENHHFHPTCARCSKCGDPFGDGEEMFLQGAAIWHPRCGPAPHDPLSADRASSELQFSLRSRTPSVNGSYCSPYSSLTRKYGYRAVSPGLVLREYREAGACSPHRITTYSYLTTEPAYLRRPVQPYDRPPTSPHFHRPPCK

Uniprot

A0A2W1BDB1   A0A2H1W9Y7   A0A0N1IEY7   A0A212FEB5   V5GP13   A0A1W4W4N6   + More
A0A1W4WGH3   A0A1W4WF73   A0A1W4WG72   A0A1W4W4M6   A0A2J7PJD5   A0A1W4WGG7   A0A2J7PJE1   A0A1Y1K033   Q7Q796   A0A1Y1JYF0   A0A1Y1JSP2   A0A182LTL8   D6X362   R4WQ91   Q0IEQ0   A0A1Y1JXC0   T1DCM8   A0A182WLU5   A0A2M3YY63   A0A2M4A2N4   A0A2M4A2R8   A0A2M4CY33   A0A336KE08   N6UMK8   A0A182RC20   A0A182FHN8   A0A1Q3FEV7   A0A1J1J283   U5EZV4   A0A1D2N7A2   A0A1Q3FEX1   A0A084VD99   A0A1Q3FF14   W5JD97   A0A0P5XNC5   A0A0P4XUL7   A0A0P6GFV7   A0A0P5QZ90   A0A0P5AD46   A0A0P5ZZM6   A0A0P5EKG4   A0A0P5DBB7   A0A0P5D9Z7   E9FUH3   A0A0N8A0F8   A0A0P5XYF5   A0A0P5KA17   A0A0P4XND8   A0A0P5XAD4   A0A1W4W4N2   A0A0N8A7G3   A0A0P4Z4X1   A0A1W4WF78   A0A0P4XJP7   A0A0P5WBE5   A0A0P5VMZ3   A0A0N8DVI5   A0A0P5XWA6   A0A0P5XCQ4   A0A0P5LUK6   A0A0P5NMB3   A0A0P5P4M8   A0A182LJT8   A0A182H289   A0A0K8VRG5   A0A1Y1JS46   W8BSZ4   U4UGV7   A0A1I8NEN7   T1PEY8   A0A0K8V6T8   A0A0K8UUZ2   W8AU25   A0A1I8NEP4   A0A2J7PJE0   A0A034W3D2   A0A1Y1JSQ0   A0A034W2E0   A0A034W0S3   A0A0K8U3U7   E0VTH7   A0A0A1WK92   A0A1I8NEN3   A0A1I8NEP7   A0A0P4WAZ9   E2BLU7   W8B1G0   A0A158NGA8   A0A195CN49   A0A088ABY8   A0A336LYN1   A0A195E6A0   A0A023FAJ6   A0A0P5W8X5  

Pubmed

28756777    26354079    22118469    28004739    12364791    18362917    + More
19820115    23691247    17510324    24330624    23537049    27289101    24438588    20920257    23761445    21292972    20966253    26483478    24495485    25315136    25348373    20566863    25830018    20798317    21347285    25474469   

EMBL

KZ150119    PZC73219.1    ODYU01007258    SOQ49878.1    KQ460820    KPJ12114.1    + More
AGBW02008963    OWR52074.1    GALX01005124    JAB63342.1    NEVH01024949    PNF16455.1    PNF16457.1    GEZM01102039    JAV52037.1    AAAB01008960    EAA11937.4    GEZM01102040    JAV52036.1    GEZM01102042    GEZM01102037    JAV52033.1    AXCM01001428    KQ971372    EFA10334.2    AK417861    BAN21076.1    CH477504    EAT39880.1    GEZM01102043    GEZM01102041    GEZM01102038    JAV52035.1    GALA01001767    JAA93085.1    GGFM01000458    MBW21209.1    GGFK01001708    MBW35029.1    GGFK01001710    MBW35031.1    GGFL01006039    MBW70217.1    UFQS01000309    UFQT01000309    SSX02719.1    SSX23093.1    APGK01017170    APGK01017171    APGK01017172    KB739998    ENN81936.1    GFDL01008970    JAV26075.1    CVRI01000066    CRL05884.1    GANO01000074    JAB59797.1    LJIJ01000169    ODN01148.1    GFDL01008951    JAV26094.1    ATLV01011195    KE524650    KFB35943.1    GFDL01008914    JAV26131.1    ADMH02001568    ETN62046.1    GDIP01069589    JAM34126.1    GDIP01236415    JAI86986.1    GDIQ01053799    JAN40938.1    GDIQ01160963    GDIQ01113520    JAL38206.1    GDIP01200670    JAJ22732.1    GDIP01036893    JAM66822.1    GDIP01158533    JAJ64869.1    GDIP01160222    JAJ63180.1    GDIP01160780    JAJ62622.1    GL732525    EFX88923.1    GDIP01194673    JAJ28729.1    GDIP01232762    GDIP01175034    GDIP01066339    GDIQ01086099    JAM37376.1    JAN08638.1    GDIQ01188593    GDIP01141428    JAK63132.1    JAL62286.1    GDIP01239222    JAI84179.1    GDIP01074994    JAM28721.1    GDIP01175033    GDIP01141429    GDIP01036892    JAJ48369.1    GDIP01217918    JAJ05484.1    GDIP01240376    JAI83025.1    GDIP01088483    JAM15232.1    GDIP01097840    JAM05875.1    GDIQ01087788    JAN06949.1    GDIP01067828    JAM35887.1    GDIP01074996    JAM28719.1    GDIQ01164864    JAK86861.1    GDIQ01182302    GDIQ01162357    JAK89368.1    GDIP01175036    GDIQ01163515    GDIQ01133770    JAJ48366.1    JAL17956.1    JXUM01023685    JXUM01023686    JXUM01023687    JXUM01023688    KQ560668    KXJ81360.1    GDHF01010842    JAI41472.1    GEZM01102036    JAV52042.1    GAMC01014216    JAB92339.1    KB632318    ERL92262.1    KA646463    AFP61092.1    GDHF01018034    JAI34280.1    GDHF01021822    JAI30492.1    GAMC01014215    JAB92340.1    PNF16456.1    GAKP01010684    JAC48268.1    GEZM01102035    GEZM01102034    JAV52043.1    GAKP01010687    JAC48265.1    GAKP01010683    JAC48269.1    GDHF01031101    JAI21213.1    DS235766    EEB16683.1    GBXI01014818    JAC99473.1    GDRN01077549    JAI62719.1    GL449042    EFN83313.1    GAMC01014218    JAB92337.1    ADTU01015113    KQ977574    KYN01897.1    SSX02720.1    SSX23094.1    KQ979608    KYN20374.1    GBBI01000235    JAC18477.1    GDIP01090734    JAM12981.1   

Proteomes

UP000053240    UP000007151    UP000192223    UP000235965    UP000007062    UP000075883    + More
UP000007266    UP000008820    UP000075920    UP000019118    UP000075900    UP000069272    UP000183832    UP000094527    UP000030765    UP000000673    UP000000305    UP000075882    UP000069940    UP000249989    UP000030742    UP000095301    UP000009046    UP000008237    UP000005205    UP000078542    UP000005203    UP000078492   

Pfam

PF00412   LIM        + More
PF02209   VHP
PF16182   AbLIM_anchor

Interpro

IPR001781   Znf_LIM        + More
IPR036886   Villin_headpiece_dom_sf       
IPR003128   Villin_headpiece       
IPR032402   AbLIM_anchor       

SUPFAM

SSF47050   SSF47050       

Gene 3D

1.10.950.10    

ProteinModelPortal

A0A2W1BDB1   A0A2H1W9Y7   A0A0N1IEY7   A0A212FEB5   V5GP13   A0A1W4W4N6   + More
A0A1W4WGH3   A0A1W4WF73   A0A1W4WG72   A0A1W4W4M6   A0A2J7PJD5   A0A1W4WGG7   A0A2J7PJE1   A0A1Y1K033   Q7Q796   A0A1Y1JYF0   A0A1Y1JSP2   A0A182LTL8   D6X362   R4WQ91   Q0IEQ0   A0A1Y1JXC0   T1DCM8   A0A182WLU5   A0A2M3YY63   A0A2M4A2N4   A0A2M4A2R8   A0A2M4CY33   A0A336KE08   N6UMK8   A0A182RC20   A0A182FHN8   A0A1Q3FEV7   A0A1J1J283   U5EZV4   A0A1D2N7A2   A0A1Q3FEX1   A0A084VD99   A0A1Q3FF14   W5JD97   A0A0P5XNC5   A0A0P4XUL7   A0A0P6GFV7   A0A0P5QZ90   A0A0P5AD46   A0A0P5ZZM6   A0A0P5EKG4   A0A0P5DBB7   A0A0P5D9Z7   E9FUH3   A0A0N8A0F8   A0A0P5XYF5   A0A0P5KA17   A0A0P4XND8   A0A0P5XAD4   A0A1W4W4N2   A0A0N8A7G3   A0A0P4Z4X1   A0A1W4WF78   A0A0P4XJP7   A0A0P5WBE5   A0A0P5VMZ3   A0A0N8DVI5   A0A0P5XWA6   A0A0P5XCQ4   A0A0P5LUK6   A0A0P5NMB3   A0A0P5P4M8   A0A182LJT8   A0A182H289   A0A0K8VRG5   A0A1Y1JS46   W8BSZ4   U4UGV7   A0A1I8NEN7   T1PEY8   A0A0K8V6T8   A0A0K8UUZ2   W8AU25   A0A1I8NEP4   A0A2J7PJE0   A0A034W3D2   A0A1Y1JSQ0   A0A034W2E0   A0A034W0S3   A0A0K8U3U7   E0VTH7   A0A0A1WK92   A0A1I8NEN3   A0A1I8NEP7   A0A0P4WAZ9   E2BLU7   W8B1G0   A0A158NGA8   A0A195CN49   A0A088ABY8   A0A336LYN1   A0A195E6A0   A0A023FAJ6   A0A0P5W8X5  

PDB

1V6G     E-value=1.73046e-14,     Score=193

KEGG

733061    K07520 actin-binding LIM protein | (RefSeq) Abp; actin-binding LIM protein 2

GO

GO:0007010   GO:0003779   GO:0046872   GO:0051015   GO:0015629   GO:0030032   GO:0016021   GO:0016740   GO:0008270   GO:0020037   GO:0004983   GO:0005634   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

Length:

370

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00143

Exp number, first 60 AAs:

0.00128

Total prob of N-in:

0.02750

outside

1  -  370

 

 

Pi

229.551938

Theta

166.861249

Tajima's D

1.451641

CLR

0.083847

CSRT

0.776211189440528

Interpretation

Uncertain