Gene

KWMTBOMO15709  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002264

Annotation

PREDICTED:_actin-binding_LIM_protein_3_isoform_X3_[Plutella_xylostella]

Location

Bomo_Chr26(-):7041781-7054779      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.504

CDS

ATGAACAATGAGGAACCAATCGAGCTGTCACACTACCCGGCTGCTTACAAGCCGCCCCCCGGAACCAAACCGAAGATAGAGAGAGACGATTTTCCAGCACCACCTTATCCATACACAGATCCGGAACGCAGAAGGCGATGGTCGGACACGTACAAGGGCGTCCCGGACAGCGACGAGGAGGTGGACGGTAAAGTGAACGGCGCGGTCAACGGCCGGGCCGGGGTCGACCCCAAGCTGCGCAAGGAGGAGGAGGAGCTGTCCAAAATCGAGACGGGGATAGCGCAGGTGTTCCTGAAGGAAGTAAAAGAACGCGAAAAGCTTCAGCAGTGGAAGAAACAAAATTTAGATCCTAGAAACGCAAGCAGAACGCCGTCCGCGTCCCGCGAGCCGACGTACCGCCTGCGCTACTCATCGCCGGTGGGCGCGTCCCCATCCCGCAGCCTCGACCACCCGCGCGCGCTCGACGAGCCCTCGCACGCCGGCCACTCGCACGCCAGCCACTCGCACATCCCCAGCTACAACGTAATGCACGCGGCTCCGCGGCCCGGCTACGGGCTCCGGTCGAGCACGCTGCCGGCCGGCGTCGGGCGACACTGCAACGGTGACTTCACATTCAGCGGCATGGGAGATAAAACTCATAGCACCGACTTCAGCAGCGGCAAATCAGATATTTCTGCCGGCTCCATAACCGATGTGGATAGAAGTGCTGTGACAACCGAAGCGGGTATAGTGGTCCGCGGGGTGAGCACGCTGGGGTCGGGGGTGGGGGTGCGCGGCGGGGTGGGGGGCGTGCGCCGCTCCCTCCCCAACATGGCCACCTCGCATCTCCTGCACGAGCCGGCCAAGCTCTACCCCTACCACTTGCTGCTCATCACCAACTACAGGCTGCCGCCCGACGTCGACAGGCTTAACTTAGAGGTAGGTAGACGGTAG

Protein

MNNEEPIELSHYPAAYKPPPGTKPKIERDDFPAPPYPYTDPERRRRWSDTYKGVPDSDEEVDGKVNGAVNGRAGVDPKLRKEEEELSKIETGIAQVFLKEVKEREKLQQWKKQNLDPRNASRTPSASREPTYRLRYSSPVGASPSRSLDHPRALDEPSHAGHSHASHSHIPSYNVMHAAPRPGYGLRSSTLPAGVGRHCNGDFTFSGMGDKTHSTDFSSGKSDISAGSITDVDRSAVTTEAGIVVRGVSTLGSGVGVRGGVGGVRRSLPNMATSHLLHEPAKLYPYHLLLITNYRLPPDVDRLNLEVGRR

Uniprot

A0A2W1BDB1   A0A2H1W9Y7   A0A2J7PJE1   A0A1Y1JS46   A0A1Y1JYF0   A0A1Y1JSQ0   + More
A0A1Y1JXC0   A0A067QP66   D6X362   V5GSX3   A0A2M3YY63   V5GP13   A0A2M4CY33   A0A2M4A2R8   A0A0P9BVM2   A0A2M4A2N4   A0A182SG45   B3MX65   A0A336LYN1   A0A0P8Y139   A0A336KE08   A0A1W4VMP0   A0A1W4VMW6   A0A1W4VZ77   A0A0Q9XFJ2   B4KCV9   A0A1W4W028   A0A1W4W0Q5   A0A0R1E6H6   A0A0Q9X535   Q9VH91   A0A0B4LGZ0   A0A1J1J0A3   B3NZM3   B4HJV3   A0A0R1E226   A0A0B4LGY1   B4QWH7   A0A0B4LI11   A0A1J1J283   B4JS29   B4PVC8   E1JIH2   A0A0M4F616   E1JIH3   E1JIH1   W5JD97   A0A182XCV5   A0A182HM84   Q7Q796   E0VTH7   A0A182LJT8   A0A0Q9VZM2   B4MBH9   A0A0L0CH97   A0A182IWA3   A0A182NMC6   A0A084VD99   A0A1B6I5V0   A0A0Q9X3T6   A0A182FHN8   B4GZ82   B4N9H2   A0A023EVR4   A0A3B0KQU9   A0A1B6H623   U5EZV4   A0A3B0K4L9   A0A0R3NL05   A0A3B0K6D7   B5DVQ7   A0A034W1R5   A0A3B0K1R8   A0A3B0K1Z1   A0A182VJG0   E2BLU7   A0A0K8TNM7   A0A182K422   A0A0R3NFI5   A0A034W0S3   A0A0R3NJI1   A0A0R3NFA4   A0A182WLU5   A0A1W4WF78   A0A1W4WGG7   A0A182RC20   A0A2S2Q664   A0A0A1WK92   A0A0A1X0N9   W8B1G0   A0A0P8ZL29   W8AU25   A0A182Y0R8   A0A232F716   A0A158NGA8   A0A0B4LGY0   A0A182H289   A0A3L8DXR7  

Pubmed

28756777    28004739    24845553    18362917    19820115    17994087    + More
17550304    10731132    12537568    12537572    12537573    12537574    16110336    17505850    17569856    17569867    26109357    26109356    20920257    23761445    12364791    20566863    20966253    26108605    24438588    24945155    15632085    25348373    20798317    26369729    25830018    24495485    25244985    28648823    21347285    26483478    30249741   

EMBL

KZ150119    PZC73219.1    ODYU01007258    SOQ49878.1    NEVH01024949    PNF16457.1    + More
GEZM01102036    JAV52042.1    GEZM01102040    JAV52036.1    GEZM01102035    GEZM01102034    JAV52043.1    GEZM01102043    GEZM01102041    GEZM01102038    JAV52035.1    KK853179    KDR10207.1    KQ971372    EFA10334.2    GALX01005123    JAB63343.1    GGFM01000458    MBW21209.1    GALX01005124    JAB63342.1    GGFL01006039    MBW70217.1    GGFK01001710    MBW35031.1    CH902629    KPU75518.1    GGFK01001708    MBW35029.1    EDV35288.1    UFQS01000309    UFQT01000309    SSX02720.1    SSX23094.1    KPU75520.1    SSX02719.1    SSX23093.1    CH933806    KRG02424.1    EDW16981.2    CM000160    KRK03306.1    KRG02425.1    AE014297    AF434683    AY075568    AAF54427.4    AAL30427.1    AAL68375.1    AHN57256.1    CVRI01000066    CRL05885.1    CH954181    EDV49733.1    CH480815    EDW42837.1    KRK03307.1    AHN57258.1    CM000364    EDX13581.1    AHN57257.1    CRL05884.1    CH916373    EDV94569.1    EDW96701.2    ACZ94871.1    CP012526    ALC47425.1    ACZ94870.1    ACZ94872.2    ADMH02001568    ETN62046.1    APCN01004378    APCN01004379    AAAB01008960    EAA11937.4    DS235766    EEB16683.1    CH940656    KRF78297.1    EDW58450.2    JRES01000409    KNC31582.1    ATLV01011195    KE524650    KFB35943.1    GECU01025398    GECU01007142    JAS82308.1    JAT00565.1    CH964232    KRF99504.1    CH479198    EDW28100.1    EDW81648.1    GAPW01000315    JAC13283.1    OUUW01000013    SPP88246.1    GECU01037579    GECU01034952    GECU01008892    JAS70127.1    JAS72754.1    JAS98814.1    GANO01000074    JAB59797.1    SPP88243.1    CM000070    KRS99826.1    SPP88242.1    EDY67673.1    GAKP01010685    JAC48267.1    SPP88245.1    SPP88244.1    GL449042    EFN83313.1    GDAI01001877    JAI15726.1    KRS99824.1    GAKP01010683    JAC48269.1    KRS99822.1    KRS99825.1    GGMS01004001    MBY73204.1    GBXI01014818    JAC99473.1    GBXI01010084    JAD04208.1    GAMC01014218    JAB92337.1    KPU75519.1    GAMC01014215    JAB92340.1    NNAY01000793    OXU26465.1    ADTU01015113    AHN57259.1    JXUM01023685    JXUM01023686    JXUM01023687    JXUM01023688    KQ560668    KXJ81360.1    QOIP01000003    RLU25241.1   

Proteomes

UP000235965    UP000027135    UP000007266    UP000007801    UP000075901    UP000192221    + More
UP000009192    UP000002282    UP000000803    UP000183832    UP000008711    UP000001292    UP000000304    UP000001070    UP000092553    UP000000673    UP000076407    UP000075840    UP000007062    UP000009046    UP000075882    UP000008792    UP000037069    UP000075880    UP000075884    UP000030765    UP000007798    UP000069272    UP000008744    UP000268350    UP000001819    UP000075903    UP000008237    UP000075881    UP000075920    UP000192223    UP000075900    UP000076408    UP000215335    UP000005205    UP000069940    UP000249989    UP000279307   

PRIDE

Q9VH91    E1JIH2   

Pfam

PF00412   LIM        + More
PF02209   VHP
PF16182   AbLIM_anchor

Interpro

IPR001781   Znf_LIM        + More
IPR036886   Villin_headpiece_dom_sf       
IPR003128   Villin_headpiece       
IPR032402   AbLIM_anchor       

SUPFAM

SSF47050   SSF47050       

Gene 3D

1.10.950.10    

ProteinModelPortal

A0A2W1BDB1   A0A2H1W9Y7   A0A2J7PJE1   A0A1Y1JS46   A0A1Y1JYF0   A0A1Y1JSQ0   + More
A0A1Y1JXC0   A0A067QP66   D6X362   V5GSX3   A0A2M3YY63   V5GP13   A0A2M4CY33   A0A2M4A2R8   A0A0P9BVM2   A0A2M4A2N4   A0A182SG45   B3MX65   A0A336LYN1   A0A0P8Y139   A0A336KE08   A0A1W4VMP0   A0A1W4VMW6   A0A1W4VZ77   A0A0Q9XFJ2   B4KCV9   A0A1W4W028   A0A1W4W0Q5   A0A0R1E6H6   A0A0Q9X535   Q9VH91   A0A0B4LGZ0   A0A1J1J0A3   B3NZM3   B4HJV3   A0A0R1E226   A0A0B4LGY1   B4QWH7   A0A0B4LI11   A0A1J1J283   B4JS29   B4PVC8   E1JIH2   A0A0M4F616   E1JIH3   E1JIH1   W5JD97   A0A182XCV5   A0A182HM84   Q7Q796   E0VTH7   A0A182LJT8   A0A0Q9VZM2   B4MBH9   A0A0L0CH97   A0A182IWA3   A0A182NMC6   A0A084VD99   A0A1B6I5V0   A0A0Q9X3T6   A0A182FHN8   B4GZ82   B4N9H2   A0A023EVR4   A0A3B0KQU9   A0A1B6H623   U5EZV4   A0A3B0K4L9   A0A0R3NL05   A0A3B0K6D7   B5DVQ7   A0A034W1R5   A0A3B0K1R8   A0A3B0K1Z1   A0A182VJG0   E2BLU7   A0A0K8TNM7   A0A182K422   A0A0R3NFI5   A0A034W0S3   A0A0R3NJI1   A0A0R3NFA4   A0A182WLU5   A0A1W4WF78   A0A1W4WGG7   A0A182RC20   A0A2S2Q664   A0A0A1WK92   A0A0A1X0N9   W8B1G0   A0A0P8ZL29   W8AU25   A0A182Y0R8   A0A232F716   A0A158NGA8   A0A0B4LGY0   A0A182H289   A0A3L8DXR7  

KEGG

733061    K07520 actin-binding LIM protein | (RefSeq) Abp; actin-binding LIM protein 2

GO

GO:0007010   GO:0003779   GO:0046872   GO:0030032   GO:0051015   GO:0015629   GO:0007411   GO:0072499   GO:0005654   GO:0016740   GO:0020037   GO:0004983   GO:0005634   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02645

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01151

outside

1  -  310

 

 

Pi

365.876479

Theta

207.738408

Tajima's D

2.755826

CLR

0.065257

CSRT

0.965401729913504

Interpretation

Uncertain