SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15698
Pre Gene Modal
BGIBMGA002270
Annotation
PREDICTED:_cytochrome_P450_4c21-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.484 PlasmaMembrane   Reliability : 1.095
 

Sequence

CDS
ATGTTGATTACAGTTATAACAGACCCAGAAGACAATTTGACAGTAGCCAACGGCACACTTCAGAAACATTTTGTCTATCAGTTCGCGAGCAACTGGTTGGGGGATGGTCTCATCACGTCATCGGGAGAGACATGGAAGCGTCACCGCAAACTATTGAACCCGGCGTTCAGTCAGCAAATGTTAAACATCTATACAGTTGTATTCAACCGTAAATCCAGAAATCTGATTTCTGCCATCGAAATCCAAATGAAGAGCGGCCCGGTGCTTATCGACACAGTTTTCAGAGAAATGGCTTTAAATACATTATTATCAACGGCATTCGGCATAGAAGAGGAAGATTCTGATTTCAACAAGAAGTATATTCATGCTGTTGATGTAATATTGGCTCTGCTGACACGTAGGTTCCAGAACCCTCTATTGCACTATCCGTTCTTTTACAAACTGAGCGCTTTAAAGAAAAAAGAGGAAGAAGTGATCGAGACAATACTAACGGCGTCGAAAAAGATCATAAAAAATAAACGGGAATCTTTGAATAAAGAACGATCTAACGAAAATAGCTATACTACTGAAAGAAAATTCAAATCAATGTTAGAGCTGCTCTTGAAAGACTCGGATGGCGATGCCTTAACGGACGAAGAGATCAGGGATGAAGTCGATACACTTATACTTGCTGGATCTGATACATCGTCACAGCTCACAGTTGCATCAGTGTGCGGAGTTTCGGATGATGATGTAGAAAAACACCACCATCCGAGATTAGTTTACACAGAAGCTGTTCTGAAGGAAACGTTAAGACTATATCCGACCATTCCACTTGTTTTGAGAAAGCCGGAAAATGAAATAAAACTAAAGAACTATACGATACCGGCCAACAGTAACTGCGTGTTGGGTATTTATGGTCTGAACCGCCACCCAGTGTGGGGCCCTGACGCGCACACGTTCCGGCCAGAGCGCTGGTTGGAGCCCGGAGGTGTGCCCGGCAACCCTAATGCATTCGCAGGATTCAGCGTCGGGAAACGGAATTGTATCGGTAAAACCTACGCCCTCATATCGACGAAGATCATACTGGCGCATTTAGTACGACGATACAAAGTTACTGCAGATATATCTAAGATTGAATTCAAAATGGATGTGATTATGACACCTTCAGACAACTGCTATGTTGATTTTGAGTTAAGAAAATGA
Protein
MLITVITDPEDNLTVANGTLQKHFVYQFASNWLGDGLITSSGETWKRHRKLLNPAFSQQMLNIYTVVFNRKSRNLISAIEIQMKSGPVLIDTVFREMALNTLLSTAFGIEEEDSDFNKKYIHAVDVILALLTRRFQNPLLHYPFFYKLSALKKKEEEVIETILTASKKIIKNKRESLNKERSNENSYTTERKFKSMLELLLKDSDGDALTDEEIRDEVDTLILAGSDTSSQLTVASVCGVSDDDVEKHHHPRLVYTEAVLKETLRLYPTIPLVLRKPENEIKLKNYTIPANSNCVLGIYGLNRHPVWGPDAHTFRPERWLEPGGVPGNPNAFAGFSVGKRNCIGKTYALISTKIILAHLVRRYKVTADISKIEFKMDVIMTPSDNCYVDFELRK

Summary

Similarity
Belongs to the cytochrome P450 family.
EMBL
BABH01020614    BABH01020615    BABH01020616    BABH01020617    BABH01020618    AK289341    + More
BAM73868.1    BABH01020606    BABH01020619    AK343194    BAM73883.1    AK343192    AK343193    BAM73881.1    NWSH01000019    PCG80725.1    KZ150122    PZC73152.1    KZ150119    PZC73210.1    NWSH01000705    PCG74676.1    PZC73211.1    KQ459144    KPJ03617.1    AK402852    BAM19419.1    KQ461111    KPJ08952.1    PCG74677.1    KM016711    AID54863.1    KZ149905    PZC78316.1    NWSH01004299    PCG65244.1    KPJ08951.1    AK343195    BAM73884.1    ODYU01000131    SOQ34388.1    JX310093    AFP20604.1    KX443457    ASO98032.1    PZC73154.1    PZC73153.1    KU550085    AMR93993.1    KZ150169    PZC72622.1    JX310091    AFP20602.1    KPJ08953.1    KPJ08955.1    GCVX01000094    JAI18136.1    KC789755    AGO62010.1    PZC72625.1    KPJ03616.1    ODYU01003287    SOQ41846.1    PZC73155.1    KPJ03615.1    KX443458    ASO98033.1    AGBW02011819    OWR46096.1    GCVX01000093    JAI18137.1    KM016713    AID54865.1    KM016714    AID54866.1    PZC72621.1    ODYU01005067    SOQ45579.1    PZC78325.1    PZC72624.1    PZC72623.1    KM016712    AID54864.1    NWSH01004577    PCG64906.1    PZC73157.1    PZC72626.1    ODYU01003095    SOQ41416.1    PZC73156.1    NWSH01001946    PCG69604.1    KX425014    ASN63841.1    NWSH01003441    PCG66289.1    NWSH01006058    PCG63705.1    PZC78319.1    PZC78324.1    BABH01020579    BABH01020580    BABH01020581    ODYU01007558    SOQ50433.1    PZC78317.1    PZC78321.1    KM016715    AID54867.1    PZC78326.1    JX310096    AFP20607.1    KPJ03618.1    PZC78322.1    PZC78320.1    JTDY01002193    KOB71906.1    PZC78318.1    KY212085    ARA91649.1    KY212086    ARA91650.1    KZ150062    PZC74190.1    ODYU01002870    SOQ40886.1    NWSH01002233    PCG68866.1    PZC78323.1    ODYU01000849    SOQ36230.1    AGBW02009886    OWR49643.1    BABH01035662    BABH01035663    GCVX01000055    JAI18175.1    GCVX01000064    JAI18166.1    ODYU01001698    SOQ38276.1    ODYU01002657    SOQ40445.1    AGBW02013250    OWR43823.1    RSAL01000110    RVE47143.1    KX425017    ASN63844.1    ODYU01001992    SOQ38944.1    SOQ40446.1    JX310097    AFP20608.1    GFDF01000640    JAV13444.1    GFDF01000581    JAV13503.1    LN609528    CEF64982.1    AK289345    BAM73872.1    EU435137    ABZ81073.1    GL732526    EFX88057.1    EFX87944.1   
Pfam
PF00067   p450
Interpro
IPR036396   Cyt_P450_sf        + More
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002403   Cyt_P450_E_grp-IV       
SUPFAM
SSF48264   SSF48264       
Gene 3D
PDB
6C93     E-value=1.29024e-36,     Score=384

Ontologies

Topology

Length:
394
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05047
Exp number, first 60 AAs:
0.00508
Total prob of N-in:
0.00529
outside
1  -  394
 
 

Population Genetic Test Statistics

Pi
456.444061
Theta
19.732549
Tajima's D
3.961045
CLR
0.488397
CSRT
0.9982000899955
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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