Silkworm Genome Informatics Database

Gene

KWMTBOMO15682

Pre Gene Modal

BGIBMGA002300

Annotation

hypothetical_protein_KGM_14775_[Danaus_plexippus]

Location

Bomo_Chr26(+):6312499-6314579 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.943

CDS

ATGATCCAACGCGAGACCGTGAGCGGCACCGCGGCGGATCCAGCTGGGGAAACGAGAAGGAAGTCCATGGACAACGTCAATTTGCAGGCCTCCGTATCTACTGGTGATTTGACGTACAGGGAAGAACGCCGTCCCACTGCGAGCGTGGCTAGCGAAGCGAACGCCAGCGTGGAGCGAGCTCCGGAGTGGGTGCCGGACATAGCGGCGCCAGCCTGCATGCGGTGCGACGCGCACTTTACCGCTTTTAGAAGAAGACATCACTGTAGGAACTGTGGTAAAGTGTTCTGCGCGTCGTGTAGTTCTAACTCGATACCGTTACCTCGCTACGGACAGCTGAAGCCGGTGCGCGTCTGCGAGGAGTGCTTCAGGAGTATAGCTACGACTTGCCGCCGTGCGCAGACAGCGAACCAGAATCATCGGTGA

Protein

MIQRETVSGTAADPAGETRRKSMDNVNLQASVSTGDLTYREERRPTASVASEANASVERAPEWVPDIAAPACMRCDAHFTAFRRRHHCRNCGKVFCASCSSNSIPLPRYGQLKPVRVCEECFRSIATTCRRAQTANQNHR

Uniprot

H9IYG6 A0A2W1BPW5 A0A2H1WWT4 A0A1E1W3J9 A0A194QJW6

Pubmed

19121390 28756777 26354079

EMBL

BABH01020532 KZ149938 PZC77028.1 ODYU01011645 SOQ57520.1 GDQN01009520 + More
GDQN01001684 JAT81534.1 JAT89370.1 KQ458761 KPJ05205.1

Proteomes

UP000005204 UP000053268

PRIDE

H9IYG6

Pfam

PF01363 FYVE

Interpro

IPR011011   Znf_FYVE_PHD        + More
IPR013083   Znf_RING/FYVE/PHD
IPR017455   Znf_FYVE-rel
IPR000306   Znf_FYVE

SUPFAM

SSF57903 SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

H9IYG6 A0A2W1BPW5 A0A2H1WWT4 A0A1E1W3J9 A0A194QJW6

PDB

1VFY E-value=8.58255e-13, Score=171

KEGG

101744058 K17603 zinc finger FYVE domain-containing protein 1 | (RefSeq) lateral signaling target protein 2 ho

PATHWAY

04140 Autophagy - animal - Bombyx mori (domestic silkworm)

GO

GO:0046872 GO:0006508 GO:0016021 GO:0004983 GO:0005634 GO:0006270 GO:0042555 GO:0003707 GO:0006281 GO:0006259

Length:

140

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00249

Exp number, first 60 AAs:

0

Total prob of N-in:

0.36525

outside

1 - 140

Pi

34.422653

Theta

34.044337

Tajima's D

0.389334

CLR

0

CSRT

0.491025448727564

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics