SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15677
Pre Gene Modal
BGIBMGA002282
Annotation
PREDICTED:_coagulation_factor_IX-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.871
 

Sequence

CDS
ATGAACAATGACATTGCCATTGTCAAAGTTGACGAAGAATTCGACTTCACTCGACGAGTTAGGGGTTGTGATTTTATACCAAAGCCCGTCGCTTACAATAATTATAGTACCAATCTTGAAGAGCCAGGCGTTCGGGCCAATATCGCCGGCTGGGGTACCACCAAGCATTATGACGGTTCCGAAGGCGGGAAACCGACTCAAAACTTGCTTCAAAGCGAAGTGGAGATAATAAATAAGGACCGATGCAAAAGAAGATGGGGCAAACGTTACTACAATATCATCGATAACTACATGATCTGTTCTAAAGACAACGCGCCGGTGCTGAACGAAGTGTGTCGGGAGAAGTACGTGGATTGTACTGATATAGATTATTCGGACGAGGTTGACGGAACAAGACGTGTAATAAGTCCAGAGAAATTAGAGCTACATTCTGCTCATCACAATGTATCGGGGAGGAGAAACGTAGACAGCGGTGGATTCTGTGAGTCAGTTAAAATTGTTCTTGCTTTCAGGGTATATCTTGATTAA
Protein
MNNDIAIVKVDEEFDFTRRVRGCDFIPKPVAYNNYSTNLEEPGVRANIAGWGTTKHYDGSEGGKPTQNLLQSEVEIINKDRCKRRWGKRYYNIIDNYMICSKDNAPVLNEVCREKYVDCTDIDYSDEVDGTRRVISPEKLELHSAHHNVSGRRNVDSGGFCESVKIVLAFRVYLD

Summary

EMBL
LC316987    BBA26326.1    BABH01020509    BABH01020510    KZ149938    PZC77024.1    + More
ODYU01002283    SOQ39562.1    RSAL01000087    RVE48232.1    RVE48233.1    NWSH01007665    PCG62872.1    AGBW02009906    OWR49591.1    JF777324    AEU11669.1    JF777325    AEU11670.1    JF777313    AEU11658.1    JF777322    AEU11667.1    JF777323    AEU11668.1    PZC77023.1    JF777315    AEU11660.1    JF777317    AEU11662.1    JF777316    AEU11661.1    JF777321    AEU11666.1    JF777320    AEU11665.1    JF777319    AEU11664.1    JF777318    AEU11663.1    HM023803    ADJ58536.1    HM023843    JF777314    ADJ58576.1    AEU11659.1    BABH01020508    LC042540    BAS69677.1    KQ459941    KPJ19183.1    KQ458761    KPJ05200.1    LC316988    BBA26327.1    PZC77025.1    KPJ19184.1    JF777190    AEU11535.1    JF777184    AEU11529.1    JTDY01002193    KOB71907.1    JF777186    AEU11531.1    JF777189    AEU11534.1    JF777194    AEU11539.1    JF777185    AEU11530.1    JF777193    AEU11538.1    JF777191    AEU11536.1    JF777192    AEU11537.1    HM023783    ADJ58516.1    HM023824    ADJ58557.1    JF777187    AEU11532.1    JF777196    AEU11541.1    JF777195    AEU11540.1    PCG62873.1    JF777188    AEU11533.1    LC042542    BAS69679.1    PZC77022.1    OWR49592.1    MF319720    ASJ26434.1    JTDY01004271    KOB68354.1    KPJ19182.1    NWSH01006308    PCG63522.1   
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
SUPFAM
SSF50494   SSF50494       
PDB
2VU8     E-value=0.000265154,     Score=100

Ontologies

Topology

Length:
175
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00851
Exp number, first 60 AAs:
0
Total prob of N-in:
0.25135
outside
1  -  175
 
 

Population Genetic Test Statistics

Pi
212.493691
Theta
203.572451
Tajima's D
0.575774
CLR
0.024829
CSRT
0.531773411329434
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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