SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15676
Pre Gene Modal
BGIBMGA002283
Annotation
PREDICTED:_uncharacterized_protein_LOC101743483_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.181
 

Sequence

CDS
ATGAATAAGTTTGTTTTCAATGAAAATTTTCCTAAATTTATAGATTATGTTTTTGACGGTCACGAGAACGACAACATCAGGTGGATGAATAATGACATAGCCATCGTGAAGGTCGAGGACGGGTTCGATTTCTCCAGAAGAATCAGGGGCTGCGATTTCATACCTAAGCCCATTTGTTACAACAATCAGAGTCAGACTTTGGAGAACCCTGGCACTATTGTCAGTATCGCTGGATGGGGTACAACAGCGAAATATAACGACTGGGTAAACAGAAGAAAAGGCAATCAACAGGATCTCTTGGAGTCTCATGTTGAGATAATATCGAAGACCAAATGCAAGAGGCGTTGGGGATCTCGGTACACGAACATCATCGACAATTACATGATCTGTACAAAGGACATCGGTCAAACAATGTCGGAAATATGTAATGAAAAATATGTGGACTGTCAAGATATAAATTACTCGGACGAGGAAGAAACTCGACGTGAGGCTCAATCTGAGAAAATACCAACGAACCTTGTTATGCACTCGTATTATAATGATACGATGGCCAACAACGTAACTGATAACGGTGCAGGGGCGAGAAGATACGCACCAATGGCCGACGGGGGATTCTGTGAGGTAAAACAAAAATTACGAAATACCAAAAGACCCTGGCCAGGTTGA
Protein
MNKFVFNENFPKFIDYVFDGHENDNIRWMNNDIAIVKVEDGFDFSRRIRGCDFIPKPICYNNQSQTLENPGTIVSIAGWGTTAKYNDWVNRRKGNQQDLLESHVEIISKTKCKRRWGSRYTNIIDNYMICTKDIGQTMSEICNEKYVDCQDINYSDEEETRREAQSEKIPTNLVMHSYYNDTMANNVTDNGAGARRYAPMADGGFCEVKQKLRNTKRPWPG

Summary

EMBL
BABH01020508    LC042540    BAS69677.1    KZ149938    PZC77023.1    NWSH01007665    + More
PCG62872.1    JF777313    AEU11658.1    JF777320    AEU11665.1    HM023803    ADJ58536.1    JF777316    AEU11661.1    JF777315    AEU11660.1    JF777322    AEU11667.1    JF777324    AEU11669.1    JF777321    AEU11666.1    JF777323    AEU11668.1    JF777325    AEU11670.1    JF777319    AEU11664.1    JF777318    AEU11663.1    RSAL01000087    RVE48233.1    JF777317    AEU11662.1    ODYU01002283    SOQ39562.1    HM023843    JF777314    ADJ58576.1    AEU11659.1    KQ459941    KPJ19183.1    KQ458761    KPJ05200.1    RVE48232.1    PZC77024.1    LC316987    BBA26326.1    BABH01020509    BABH01020510    LC316988    BBA26327.1    PZC77025.1    JTDY01002193    KOB71907.1    KPJ19184.1    PCG62873.1    PZC77022.1    JF777188    AEU11533.1    LC042542    BAS69679.1    JF777190    AEU11535.1    JF777189    AEU11534.1    JF777186    AEU11531.1    JF777184    AEU11529.1    HM023824    ADJ58557.1    JF777185    AEU11530.1    JF777187    AEU11532.1    JF777194    AEU11539.1    JF777193    AEU11538.1    JF777192    AEU11537.1    JF777196    AEU11541.1    HM023783    ADJ58516.1    JF777191    AEU11536.1    AGBW02009906    OWR49592.1    JF777195    AEU11540.1    KPJ19182.1    MF319720    ASJ26434.1    JTDY01004271    KOB68354.1   
Pfam
PF00089   Trypsin
Interpro
IPR009003   Peptidase_S1_PA        + More
IPR001254   Trypsin_dom       
IPR001314   Peptidase_S1A       
SUPFAM
SSF50494   SSF50494       
PDB
1EKB     E-value=0.000107222,     Score=105

Ontologies

Topology

Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00185
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04639
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
324.589055
Theta
209.575749
Tajima's D
1.885513
CLR
0.278827
CSRT
0.864506774661267
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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