Gene

KWMTBOMO15668

Pre Gene Modal

BGIBMGA002287

Annotation

PREDICTED:_5-hydroxytryptamine_receptor_1-like_[Bombyx_mori]

Location

Bomo_Chr26(-):5649503-5651779      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.928

CDS

ATGGCGACTTCAAATAATAAATCCCACTCACTGCCTAGCTTTATCGCTTTACCTTCGAGCCTTCTCATACTGGTGTTCATAGTTCTTTTGCAAAACAACGTTGCGGCCACATCTGATTTCACAGAAACATCCCCGGAATACGATTACATATTGACCAATAACTCGACCCTGAACTGGACGTTTTTCGAAGGAAACGCCAGTCACAAGCCGGTGCACATAAAACATTCAAAATACTCCGCCCCCGTTTCAATTTTCTTATCATTGTTGTTTTTGGTCGTGATAGTTGGAACGATTGTTGGTAATATCCTAGTTTGTGTGGCCGTTCGACTGGTCAGAAAATTGAGGAGGCCGAGTAATTATTTAATAGTATCACTGGCGGTCAGTGATCTGTGTGTCGCAATCATAGTCATGCCAGTAGCCACTGTATACGATATAATGGGATCTTGGCCCTTTGGACCCGTAATTTGCGACTTTTGGGTATCGAGTGATGTTTTGTCGTGCACCGCAAGCATCCTGAACCTCTGCATGATCTCAGTGGATCGATACTACGCGATTACAAAACCATTAGAATACGGCGTGAAGAGGACACCGAGGAGGATGCTATTTTGTGTTTTCATAGTATGGATAAGTGCAGCTTTCATTTCTTTACCACCAGTTTTAATACTAGGCAACGAGAAGACTGAGACCTCGTGTTCTGTTTCCCAAAATCAGTATTACCAAGTTTATGCTACGTTAGGATCCTTCTATATCCCGTTGACTGTTATGGTAATTGTGTATTACAAAATATTCAGAGCGGCAAGAAAAATAGTGAAAGATGAGAAACGTGCTCAATCGCATTTAGAAGCGCATTGCTATCTCGAGATTAACGTTAAGAATGGAGGAGCGACCGAAGCGAAACTTCTCGGCGCCCAGACCACGACTCAACCGCCAAGAGGATCTACAGCGAGCACTAACACAACTTGCAGCGTTGAGAAAACCGAAAGCGGGATTGGACGGTGCTTTAGTGGCCAGCGGAAATCAAATGAATCCCAGTACCCGATGCTTCACCAACCAAAGACCCCAACTAAACCTATTCACACTATAAATCGATCTCCATCTACACTAACACCAAACAACAAGCTATTAGTTAAAGAACGAAGTCGCGAGTCGTCGGAGAGTAGTAACAAGATAAATACAAACAGAATTCGCTCATCCCTCTCTAATTTTGCTCAAAAAAGTCATAAAGCCAAAGATATGTTCCAAACGCAGTCGCCGCATCAAAAGAAGCTGCGGTTTCAACTGGCGAAAGAGCGGAAAGCCTCCACGACCCTCGGGATTATTATGTCAGCGTTTATAGTTTGCTGGTTACCGTTTTTCGTGCTGGCCTTACTCAGGCCGTTCCTGAACGAGGACGCTATCCCGGATGCAGTGAGCGCTCTATTCCTCTGGCTGGGCTATTTAAACAGCCTACTCAATCCAATCATTTACGCGACATTAAACAGGGACTTTCGGAAGCCTTTCCAAGAGATTCTGTTCTTTCGATGCTCGAACCTGAACCACATGATGCGCGAGGAGTTCTACCACAGCCAGTACGGAGATCCGGACCATTACTGTGTAAACAACACGACGAAGCTAAATAACTACGACGAAGGAGTCGAAATAGTTTCGGCTGTCGACAGAGAGGAGACAAGAGCATCAGAGAGCTTTCTATGA

Protein

MATSNNKSHSLPSFIALPSSLLILVFIVLLQNNVAATSDFTETSPEYDYILTNNSTLNWTFFEGNASHKPVHIKHSKYSAPVSIFLSLLFLVVIVGTIVGNILVCVAVRLVRKLRRPSNYLIVSLAVSDLCVAIIVMPVATVYDIMGSWPFGPVICDFWVSSDVLSCTASILNLCMISVDRYYAITKPLEYGVKRTPRRMLFCVFIVWISAAFISLPPVLILGNEKTETSCSVSQNQYYQVYATLGSFYIPLTVMVIVYYKIFRAARKIVKDEKRAQSHLEAHCYLEINVKNGGATEAKLLGAQTTTQPPRGSTASTNTTCSVEKTESGIGRCFSGQRKSNESQYPMLHQPKTPTKPIHTINRSPSTLTPNNKLLVKERSRESSESSNKINTNRIRSSLSNFAQKSHKAKDMFQTQSPHQKKLRFQLAKERKASTTLGIIMSAFIVCWLPFFVLALLRPFLNEDAIPDAVSALFLWLGYLNSLLNPIIYATLNRDFRKPFQEILFFRCSNLNHMMREEFYHSQYGDPDHYCVNNTTKLNNYDEGVEIVSAVDREETRASESFL

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

S4UQW2   A0A2W1BJ90   A0A3G6ITM7   A0A2H1VLX3   A0A1E1WD65   A0A0L7KL42   + More
A0A0N1IGJ9   A0A142F420   A0A194QIH1   D6X0T4   N1NSY0   A0A0C9Q5G1   A0A1Z2RSH1   Q0P7L6   A0A1B6DW61   J3JXM6   K7IM91   A0A3L8E1P0   A0A2H8TQD5   U5XHJ3   B4NH14   A0A1B3P5V7   A0A0P6EWS5   A0A0P5RJL6   A0A0P5N9N9   A0A0N8E489   A0A0P5QUK3   A0A0P5J6M4   A0A0P5XR33   A0A0P4XI68   A0A0P5M379   A0A0P5UF56   A0A0P5WAF6   A0A0P6F8E8   A0A0P5C2K3   A0A0N8D387   A0A0P5TKN2   A0A2S2R0C3   J9M088   A0A0P6FA72   A0A0P5JGC0   A0A0P5PR83   A0A0P5HRW1   A0A0N8C2N5   A0A0P5WEW4   A0A0P5PVQ0   A0A0P5ZH32   A0A0P6F4I8   A0A0N8CYU5   T1FH73   A0A3S4QB33   A0A0P5A957  

Pubmed

23922709    28756777    26227816    26354079    26974346    18362917    + More
19820115    18054377    18025266    18316733    20068045    21843505    23604020    16945110    22516182    20075255    30249741    17994087    23254933   

EMBL

JX878498    AGL46976.1    KZ150086    PZC73775.1    MH025798    AZA07970.1    + More
ODYU01003281    SOQ41835.1    GDQN01006126    JAT84928.1    JTDY01009120    KOB64083.1    KQ459941    KPJ19176.1    KT946790    AMQ67549.1    KQ458761    KPJ05194.1    KQ971372    EFA10682.2    BK005867    DAA64504.1    GBYB01009273    JAG79040.1    KX360127    ASA47150.1    AM076717    CAJ28210.1    GEDC01007397    JAS29901.1    BT127996    AEE62958.1    QOIP01000001    RLU26305.1    GFXV01003663    MBW15468.1    KF297572    AGZ62050.1    CH964272    EDW84511.1    KU712068    AOG12998.1    GDIQ01056998    GDIQ01056997    JAN37740.1    GDIQ01203954    GDIQ01101592    JAL50134.1    GDIQ01148924    GDIQ01049859    JAL02802.1    GDIQ01172159    GDIQ01172158    GDIQ01130986    GDIQ01128433    GDIQ01125690    GDIQ01120780    GDIQ01063356    GDIQ01059600    GDIQ01059599    GDIQ01044905    GDIQ01032820    JAN31381.1    GDIQ01229247    GDIQ01132340    GDIQ01129680    GDIQ01063355    GDIQ01048366    JAL22046.1    GDIQ01203953    GDIP01044650    GDIQ01075495    GDIQ01072645    GDIQ01072644    GDIQ01051263    JAK47772.1    JAM59065.1    GDIP01070593    JAM33122.1    GDIP01240830    JAI82571.1    GDIP01196888    GDIP01171125    GDIQ01161417    GDIQ01129679    GDIP01123941    GDIP01088890    GDIQ01044904    JAJ26514.1    JAK90308.1    GDIP01113949    JAL89765.1    GDIP01179077    GDIP01112692    GDIP01109885    GDIP01095543    GDIP01088891    JAM14824.1    GDIQ01051262    JAN43475.1    GDIP01198429    GDIP01176445    GDIP01136834    GDIP01130587    GDIP01073152    JAJ46957.1    GDIP01073151    JAM30564.1    GDIP01124994    JAL78720.1    GGMS01014037    MBY83240.1    ABLF02033750    ABLF02033754    ABLF02033757    ABLF02033759    ABLF02033760    GDIQ01063354    JAN31383.1    GDIQ01199804    JAK51921.1    GDIQ01130985    JAL20741.1    GDIQ01223830    GDIQ01220931    JAK27895.1    GDIQ01231492    GDIQ01229246    GDIQ01132339    GDIQ01120779    GDIQ01063353    JAL30947.1    GDIP01176446    GDIP01130588    GDIP01112693    GDIP01087792    GDIP01061148    JAM15923.1    GDIQ01129678    JAL22048.1    GDIP01044651    JAM59064.1    GDIQ01061658    JAN33079.1    GDIP01085487    JAM18228.1    AMQM01007726    KB097661    ESN92183.1    NCKU01009845    RWS01106.1    GDIP01202376    JAJ21026.1   

Proteomes

UP000037510    UP000053240    UP000053268    UP000007266    UP000002358    UP000279307    + More
UP000007798    UP000007819    UP000015101    UP000285301   

Pfam

PF00001   7tm_1

Interpro

IPR017452   GPCR_Rhodpsn_7TM        + More
IPR000276   GPCR_Rhodpsn       
IPR002233   ADR_fam       
IPR000929   Dopamine_rcpt       
IPR000995   Musac_Ach_rcpt       

ProteinModelPortal

S4UQW2   A0A2W1BJ90   A0A3G6ITM7   A0A2H1VLX3   A0A1E1WD65   A0A0L7KL42   + More
A0A0N1IGJ9   A0A142F420   A0A194QIH1   D6X0T4   N1NSY0   A0A0C9Q5G1   A0A1Z2RSH1   Q0P7L6   A0A1B6DW61   J3JXM6   K7IM91   A0A3L8E1P0   A0A2H8TQD5   U5XHJ3   B4NH14   A0A1B3P5V7   A0A0P6EWS5   A0A0P5RJL6   A0A0P5N9N9   A0A0N8E489   A0A0P5QUK3   A0A0P5J6M4   A0A0P5XR33   A0A0P4XI68   A0A0P5M379   A0A0P5UF56   A0A0P5WAF6   A0A0P6F8E8   A0A0P5C2K3   A0A0N8D387   A0A0P5TKN2   A0A2S2R0C3   J9M088   A0A0P6FA72   A0A0P5JGC0   A0A0P5PR83   A0A0P5HRW1   A0A0N8C2N5   A0A0P5WEW4   A0A0P5PVQ0   A0A0P5ZH32   A0A0P6F4I8   A0A0N8CYU5   T1FH73   A0A3S4QB33   A0A0P5A957  

PDB

6CM4     E-value=5.07664e-48,     Score=484

KEGG

101742917    K04163 5-hydroxytryptamine receptor 7 | (RefSeq) 5-hydroxytryptamine receptor 1-like

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004935   GO:0005886   GO:0004930   GO:0030425   GO:0004993   GO:0030594   GO:0005887   GO:0007187   GO:0007268   GO:0016907   GO:0060180   GO:0016545   GO:0016546   GO:0016543   GO:0007186   GO:0004983   GO:0005634   GO:0006270   GO:0042555   GO:0003707   GO:0006281   GO:0006259  

Subcellular location

Cell membrane  

SignalP

Position:   1 - 36,         Likelihood:  0.903184

 

 

Length:

563

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

178.39255

Exp number, first 60 AAs:

20.90068

Total prob of N-in:

0.99862

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  85

TMhelix

86  -  108

inside

109  -  120

TMhelix

121  -  143

outside

144  -  157

TMhelix

158  -  180

inside

181  -  200

TMhelix

201  -  223

outside

224  -  237

TMhelix

238  -  260

inside

261  -  432

TMhelix

433  -  455

outside

456  -  469

TMhelix

470  -  492

inside

493  -  563

 

 

Pi

39.771251

Theta

34.854331

Tajima's D

0.358721

CLR

0.923671

CSRT

0.482625868706565

Interpretation

Uncertain