Gene

KWMTBOMO15665  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA002288

Annotation

C-type_lectin_21_precursor_[Bombyx_mori]

Location

Bomo_Chr26(+):5509187-5515640      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.319

CDS

ATGAAAGCGGCAGTGGCCAGCCTCGTTTTGGTTCTGGCCGTCACTTATCTGGACGGTCAACAGTTTCGATATGACTATACATACTTCAGGGACATCAACGGGTGGTTGAAGCTTCAGGAGATCCCGGCTAACTGGCAGGAGGCTCGATTGAGATGTCATCTTGAAGGGTCCGTTTTGGCATCTCCTCTGGACGATGCGTTGAAGAGCGGCATGTTATCTCTAATAAAGAACAAGACTTCATGTGGTATATTCACCGGCATCCATGCGACATTTTCTAAAGGAGACTACCGTTCTGTTGAAGGGGTCCCATTGGCGAATATTCCTCACGATTGGGCCGATTATGAACCAGATAATGCCGGAGATGACGAAAACTGTATCCTCATGAATCCTGATGGAAACTTCGCCGACGTTAACTGTACTGAGACGTTCCAATACGTTTGCTATAAGAAAAAGACTTCAACTGTTGCTATGGCTTCTTGTGGAAGCGTTGACAGTGAATATGTTCTCAGCAAAGACACTGGTAATTGTTACAAGTTCCACAAAGTTCCTCGTACCTGGTCGCGTGCCTACATGGCCTGTTCAGCAGAAGGAGGATACCTCACGATTATTAACAACGATAAGGAAGCCGCGTTCCTAAGGGACCTTTTCGCGAAGAACCCTGCCGGTCAAATGATCGGAAGTTTCTGGAAAGATGTTGCCTTCATTGGCTTCCACGACTGGAATGAGCACGGCGAATGGCTAACGATCAATGGTGAGAGATTACAAGAGGCCGGTTACGAGAAATGGTCTGGTGGTGAGCCCAACAACTCCTCTAATGGTGAATATTGCGGCTCGATCTACCGCTCGGCTCTATTCAACGACCTTTGGTGCGAAAGACCAGCACCATTTATCTGCGAGAAGGAACCTCGCAGCTTACTCCGAGAGCACGACGACAAATAA

Protein

MKAAVASLVLVLAVTYLDGQQFRYDYTYFRDINGWLKLQEIPANWQEARLRCHLEGSVLASPLDDALKSGMLSLIKNKTSCGIFTGIHATFSKGDYRSVEGVPLANIPHDWADYEPDNAGDDENCILMNPDGNFADVNCTETFQYVCYKKKTSTVAMASCGSVDSEYVLSKDTGNCYKFHKVPRTWSRAYMACSAEGGYLTIINNDKEAAFLRDLFAKNPAGQMIGSFWKDVAFIGFHDWNEHGEWLTINGERLQEAGYEKWSGGEPNNSSNGEYCGSIYRSALFNDLWCERPAPFICEKEPRSLLREHDDK

Uniprot

H9IYF4   O97363   D2X2F6   H9IYF5   A0A0N1IPT5   A0A194QAQ3   + More
A0A096ZGV0   A0A3S2P588   G5CJE6   Q9NBV9   C0L7M0   C0L7M1   A0A3S2NP58   A0A2H1WK53   A0A2A4IYF0   A0A2W1BVD9   A0A2A4J280   A0A173M1W5   A0A212FF49   Q19AB1   A0A096ZGV4   I1VR05   A0A2W1BZP3   A0A1E1WQ86   A0A3S2L865   A0A2W1BYL2   A0A0N1PJ18   A0A1E1WP12   A0A2A4J3T7   A0A2A4J242   A0A2W1BVG4   A0A2W1BTF0   A0A2W1C0J5   B7SVM1   A0A194QAQ8   A0A0L7LUC3   R9UPV0   A0A0D3M5W6   O96359   A0A3S2TGZ3   Q5MGF0   A0A2Z5WQ31   A0A2A4IWU7   A0A0L7KKI4   A0A0L7KUN5   Q5UAW8   A0A2A4J4S6   A0A0L7LBS8   A0A2W1BTE2   A0A3S2LAT9   A0A219YXH2   Q5UAW7   A0A219YXK5   A0A219YXH1   A0A219YXH0   A0A2A4J2P8   Q5MGG4   A0A3S2NK24   B1A5Z5   A0A0L7KS66   A0A3G1HH34   A0A219YXH4   A0A219YXG9   A0A2W1BF95   I1VR07   A0A0L7LT05   A0A2A4K927   A0A219YXG7   A0A3S2TBA6   A0A219YXI8   A0A219YXI5   A0A219YXH3   A0A096ZGV2   A0A219YXH6   A0A2W1BDY0   A0A1C9EGM6   A0A219YXI1   A0A219YXH5   A0A194QMK1   A0A219YXH8   A0A219YXG8   I1VR06   A0A2W1B2K8   A0A2H1VQU1   A0A3G1HH41   A0A3G1HH66   A0A194PEZ5   I4DJJ2   A0A219YXL1   A0A3G1HH42   S4PJZ4   A0A219YXH7   I1VR03  

Pubmed

19121390    9310381    9989592    26354079    10954704    28756777    + More
22118469    17568670    22516747    19033442    26227816    9818384    16023793    28870445    15763465    16640722    22651552    23622113   

EMBL

BABH01020449    AJ011573    CAB38429.1    GQ487489    ADB12587.1    BABH01020450    + More
KQ460044    KPJ18317.1    KQ459232    KPJ02552.1    KF752419    AIR95998.1    RSAL01000019    RVE52735.1    JN133501    AEO52696.1    AF242202    AAF91316.2    FJ666210    ACN41858.1    FJ666211    ACN41859.1    RVE52734.1    ODYU01009180    SOQ53429.1    NWSH01005098    PCG64438.1    KZ149926    PZC77594.1    NWSH01003559    PCG66111.1    LC150882    BAV01248.1    AGBW02008849    OWR52366.1    DQ533877    ABF83203.1    KF752421    AIR96000.1    JQ269656    AFI47451.1    KZ149905    PZC78330.1    GDQN01002063    JAT88991.1    RSAL01000824    RVE41129.1    PZC78327.1    KPJ18324.1    GDQN01002397    JAT88657.1    NWSH01003594    PCG66072.1    PCG66071.1    PZC78331.1    PZC78329.1    PZC77593.1    EU770390    ACI32834.1    KPJ02557.1    JTDY01000107    KOB78821.1    KC733761    AGN70857.1    KF285999    AIC33761.1    AF023275    AAD09286.1    RSAL01000150    RVE45770.1    AY829836    AAV91450.1    LC209794    BBC20960.1    PCG64437.1    JTDY01009247    KOB63853.1    JTDY01005614    KOB66830.1    AY768811    AAV41236.1    NWSH01002983    PCG67147.1    JTDY01001800    KOB72850.1    PZC78328.1    RSAL01000062    RVE49558.1    KX550125    AQY54442.1    AY768812    AAV41237.2    KX550129    AQY54446.1    KX550126    AQY54443.1    KX550127    AQY54444.1    NWSH01003419    PCG66335.1    AY829822    AAV91436.1    RVE49559.1    EU426550    ABZ81710.1    JTDY01006582    KOB65869.1    KY111304    KY111307    AQX37240.1    AQX37243.1    KX550130    AQY54447.1    KX550120    AQY54437.1    KZ150306    PZC71506.1    JQ269658    AFI47453.1    JTDY01000152    KOB78577.1    NWSH01000031    PCG80506.1    KX550123    AQY54440.1    RSAL01001098    RVE40947.1    KX550142    AQY54459.1    KX550141    AQY54458.1    KX550128    AQY54445.1    KF752420    AIR95999.1    KX550132    AQY54449.1    PZC71507.1    KX778610    AON96650.1    KX550136    AQY54453.1    KX550131    AQY54448.1    KQ461198    KPJ06185.1    KX550124    AQY54441.1    KX550122    AQY54439.1    JQ269657    AFI47452.1    KZ150418    PZC70939.1    ODYU01003868    SOQ43168.1    KY111311    AQX37247.1    KY111312    AQX37248.1    KQ459606    KPI91593.1    AK401460    BAM18082.1    KX550139    AQY54456.1    KY111310    AQX37246.1    GAIX01004755    JAA87805.1    KX550133    AQY54450.1    JQ269654    AFI47449.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    + More
UP000037510   

PRIDE

H9IYF4    O97363    D2X2F6    H9IYF5   

Pfam

PF00059   Lectin_C        + More
PF00293   NUDIX

Interpro

IPR016187   CTDL_fold        + More
IPR016186   C-type_lectin-like/link_sf       
IPR001304   C-type_lectin-like       
IPR018378   C-type_lectin_CS       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR003563   OxG-triPHTase       
IPR000086   NUDIX_hydrolase_dom       

SUPFAM

SSF56436   SSF56436        + More
SSF55811   SSF55811       

Gene 3D

3.10.100.10    

ProteinModelPortal

H9IYF4   O97363   D2X2F6   H9IYF5   A0A0N1IPT5   A0A194QAQ3   + More
A0A096ZGV0   A0A3S2P588   G5CJE6   Q9NBV9   C0L7M0   C0L7M1   A0A3S2NP58   A0A2H1WK53   A0A2A4IYF0   A0A2W1BVD9   A0A2A4J280   A0A173M1W5   A0A212FF49   Q19AB1   A0A096ZGV4   I1VR05   A0A2W1BZP3   A0A1E1WQ86   A0A3S2L865   A0A2W1BYL2   A0A0N1PJ18   A0A1E1WP12   A0A2A4J3T7   A0A2A4J242   A0A2W1BVG4   A0A2W1BTF0   A0A2W1C0J5   B7SVM1   A0A194QAQ8   A0A0L7LUC3   R9UPV0   A0A0D3M5W6   O96359   A0A3S2TGZ3   Q5MGF0   A0A2Z5WQ31   A0A2A4IWU7   A0A0L7KKI4   A0A0L7KUN5   Q5UAW8   A0A2A4J4S6   A0A0L7LBS8   A0A2W1BTE2   A0A3S2LAT9   A0A219YXH2   Q5UAW7   A0A219YXK5   A0A219YXH1   A0A219YXH0   A0A2A4J2P8   Q5MGG4   A0A3S2NK24   B1A5Z5   A0A0L7KS66   A0A3G1HH34   A0A219YXH4   A0A219YXG9   A0A2W1BF95   I1VR07   A0A0L7LT05   A0A2A4K927   A0A219YXG7   A0A3S2TBA6   A0A219YXI8   A0A219YXI5   A0A219YXH3   A0A096ZGV2   A0A219YXH6   A0A2W1BDY0   A0A1C9EGM6   A0A219YXI1   A0A219YXH5   A0A194QMK1   A0A219YXH8   A0A219YXG8   I1VR06   A0A2W1B2K8   A0A2H1VQU1   A0A3G1HH41   A0A3G1HH66   A0A194PEZ5   I4DJJ2   A0A219YXL1   A0A3G1HH42   S4PJZ4   A0A219YXH7   I1VR03  

PDB

5G6U     E-value=7.75396e-10,     Score=152

KEGG

101736745    no KO assigned | (RefSeq) macrophage mannose receptor 1-like

GO

GO:0030246   GO:0006281   GO:0008413  

SignalP

Position:   1 - 19,         Likelihood:  0.960096

 

 

Length:

312

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.27533

Exp number, first 60 AAs:

1.26864

Total prob of N-in:

0.07940

outside

1  -  312

 

 

Pi

212.924878

Theta

178.601949

Tajima's D

0.609804

CLR

179.20023

CSRT

0.542422878856057

Interpretation

Uncertain