SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15660  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000826
Annotation
PREDICTED:_melanotransferrin_[Papilio_xuthus]
Full name
Transferrin      
Location in the cell
Extracellular   Reliability : 1.734
 

Sequence

CDS
ATGGCAGCTATTTTTTCATTTACAATTTTATGTTTTATTACCGCTCAAACTTCAGCTAACTACTTTGGCAGCGAAAATGTTAACAAAATAGGAAGCATCCAAAGGAAAGAAGGTCAAGATCTAATAACATGGTGCACTATATCAGCATTGGAACAAAAAAAATGTGAAAAACTTATGAAGAGTTCTTTGCAGGATAAAGGACTTTTTGGGAATGATTATATTGAGTTGCAGTGTAAAAAGGCATTCGACATTGAAGAGTGTATGAAATGGCTAGAACAAGAAGAGGCTACACTGCTTGGCTTAGATGCAGGAGAAGTGTATGTTGCTGGCAGATATCATTCTCTTGTGCCCATATTACAAGAGTTAGATGGGCGTGGAGAACCGTACCAATATTCTGTTGCTGTAGTTCGTAAAGGAGGACTACCAAATATTCAGCCGGGGTATGGTCTTCAGGCCATGCGAGGAGCAAAAGCCTGCTTTCCCAGTGTCGGTTCATTGGCAGGATGGGTAATGCCGATACATGTATTAATGCAAGAAGGTGGACTGAAGGTCACTGATTGCAACAATCACGTCAAATCAGCAACCGAATACTTTGGAGAATCTTGCGCGCCAAACTCATTAAAGGACCTCTATAACCCGATTGGGGATAATTCCGATAAGCTATGCAAACTATGCTATGGCGGTGCCGGTATTCGATGCACACTAGCCGACCCGTTCGCCGGATATGAGGGAGCCTTGAAATGTCTCGTAGCTAACAACTCTGGGGATATTGCCTTCGTACGTGACACCACTATACAGCACGCCCTGCTCTCTCATAAGATACTTGGCGGCATAACCGAGGATCAGTTCGAGTTGATATGCCGAGACGGATCCCGGAGGCCGGTCACGGAGTGGGAACATTGTAACTGGGGCAAAGTTCCCGCTGATGCTATCGTTACAACGAGCGCTGCCACTCCTGAACAGAAGAGAAGGTATCAAAACTTCCTACAGCGCATCGTCCAACTGTACGGGGAGCCGAACCGATTCAACAAAATGTACAACGCCACGGTGTACCAGCCGAAGGACAAATTCGGGAATATTCTATCGTCATCTACGGAACCAAACAGATTTTCATACGATAATTATAATTTTAACAAGGATCGATATTACGATAACAGAGAAACCGAGAGCGATATTCGGGTCAGCACATTGCCTCCATACCAACAGCGGACCGATGACACAGGAAGACCTATTGAATTACCATTTCAATTGTTCTCGTCGAATGAGACAACCGACTTACTACTACAGGACTCAACGATAAACTTCATAATATTGTCGGAGAGCGAACAGGCAGCTAAACACATATTGAACAACAAGTATGTTGGCGACCAGGCCGAGAAGGCGGTTATGGGCATTAGAGATTGCCCGGTGAAACGCGCAGCCCTATGTGTGACTAGTGACCCAGAAATGGACAAATGCGTAAAGATGAGGAGAGCGCTGAAGGCGGCGTCGCTGTCCCCCGAGCTGAGCTGCTGGCGCGCACACAGCTCGCGGCACTGCGCGCGCGCCATCGCCGCCGGCTCCTGCGACTTCGCGCTGTTCGACGCCGGCGACATGCTGCACGCCGCGCAGCACGACCGCCTCGTGCCCTTCATGCAAGAGGTATACTCAAGCGGCGATAGCTGGTACTACGCGGTGGCCGTCGCCAAAGAACAGGACCCGGATACGGATCTGACGTATCTGCGCGCCAAGAACACGTGCCACACCGGCATAGGCATGGCCGCCGGCTGGCTATATCCGCTGGCTTATCTGCTGTCTAACGGATGGATCAGGCCGTACGGTTGCAACGGGGCCCACGCAGCAGCCGAGTACTGGACCAAGTCCTGCGCACCCGGAGCGTTGAGCTCTGAATACGTGGACTCGGGCAGCTTGCCTTACGACAACCTCTGTCACTTATGTCATGGTGCCTCTTTCAGACGTTGTCGGCGCGACGCGAGCGAGCAGTACTTCGGTCACGTGGGCGCGGTGCGGTGCATGGTGGAGGGGGGCGGGGACGTGGCCTTCGTCCGCCACACCGCGCCCGCAGAGGTGTCCGCCGGACGACGCCGCGAGTTCTGGGCGCGCGACCTCTTGCCCGACGACCTGCAGCTTCTATGTCCAGACGGCACCCGCGCCAAAATGCACGAGTACAGACACTGTAACCTCGGCAAGGTCCCAGGATCGGTCCTGATGGGGCGGGCGAATCATACAGAACTCGACGCTTTTTCGAATTTAATGGTATACGCTCTACAATTCTACGGGGCTGTCACTTCTGATGAATTCAGTTTCAGCATGTTCTACTCTCAGCCTCCTTATTCCGATCTGATATTCAGTGATGTCGCAGTACGTCTGAAGCCACTGCCACATAATACACGCTCAGCAGAGATAATTGCTGGCCCGGCTCTGTTACGTGCGGCACGCATTGTGTCATGCGACGCACCTCAAGCCTCATACTACGTGGCTCCAGACCCCGAGTTCTTATCGCACGCTAATAAGAATCATATGGGGCATTTTCTAGCTATAGTTATATTTATTGTTGCACTTTTAAGATAA
Protein
MAAIFSFTILCFITAQTSANYFGSENVNKIGSIQRKEGQDLITWCTISALEQKKCEKLMKSSLQDKGLFGNDYIELQCKKAFDIEECMKWLEQEEATLLGLDAGEVYVAGRYHSLVPILQELDGRGEPYQYSVAVVRKGGLPNIQPGYGLQAMRGAKACFPSVGSLAGWVMPIHVLMQEGGLKVTDCNNHVKSATEYFGESCAPNSLKDLYNPIGDNSDKLCKLCYGGAGIRCTLADPFAGYEGALKCLVANNSGDIAFVRDTTIQHALLSHKILGGITEDQFELICRDGSRRPVTEWEHCNWGKVPADAIVTTSAATPEQKRRYQNFLQRIVQLYGEPNRFNKMYNATVYQPKDKFGNILSSSTEPNRFSYDNYNFNKDRYYDNRETESDIRVSTLPPYQQRTDDTGRPIELPFQLFSSNETTDLLLQDSTINFIILSESEQAAKHILNNKYVGDQAEKAVMGIRDCPVKRAALCVTSDPEMDKCVKMRRALKAASLSPELSCWRAHSSRHCARAIAAGSCDFALFDAGDMLHAAQHDRLVPFMQEVYSSGDSWYYAVAVAKEQDPDTDLTYLRAKNTCHTGIGMAAGWLYPLAYLLSNGWIRPYGCNGAHAAAEYWTKSCAPGALSSEYVDSGSLPYDNLCHLCHGASFRRCRRDASEQYFGHVGAVRCMVEGGGDVAFVRHTAPAEVSAGRRREFWARDLLPDDLQLLCPDGTRAKMHEYRHCNLGKVPGSVLMGRANHTELDAFSNLMVYALQFYGAVTSDEFSFSMFYSQPPYSDLIFSDVAVRLKPLPHNTRSAEIIAGPALLRAARIVSCDAPQASYYVAPDPEFLSHANKNHMGHFLAIVIFIVALLR

Summary

Description
Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate.
Similarity
Belongs to the transferrin family.
Belongs to the type-B carboxylesterase/lipase family.
EMBL
BABH01041649    BABH01041650    BABH01041651    KZ150086    PZC73771.1    ODYU01004216    + More
SOQ43858.1    KQ459193    KPJ03186.1    AGBW02009523    OWR50598.1    NWSH01008625    PCG62476.1    GAIX01003459    JAA89101.1    NWSH01006430    PCG63437.1    KQ414590    KOC70364.1    KK107250    EZA54389.1    GECZ01029819    GECZ01027133    GECZ01025561    GECZ01021617    GECZ01018186    GECZ01005385    JAS39950.1    JAS42636.1    JAS44208.1    JAS48152.1    JAS51583.1    JAS64384.1    KQ980895    KYN11765.1    NEVH01015814    PNF26743.1    GBYB01012173    JAG81940.1    KZ288320    PBC28260.1    KQ435739    KOX76871.1    KK852714    KDR17893.1    GEZM01087547    JAV58620.1    ADTU01000292    MF627745    AXA98485.1    GL449414    EFN82736.1    KQ976509    KYM82671.1    KQ977151    KYN05279.1    GL440715    EFN65475.1    GDHC01005532    GDHC01000334    JAQ13097.1    JAQ18295.1    LBMM01001639    KMQ95963.1    GANO01004219    JAB55652.1    NNAY01000334    OXU29135.1    CVRI01000054    CRL00295.1    KQ971372    EFA09777.1    KQ983238    KYQ46261.1    FX985458    BAX07471.1    GFTR01008127    JAW08299.1    OUUW01000009    SPP85065.1    GEBQ01011248    JAT28729.1    GL888609    EGI59058.1    UFQT01000100    SSX19905.1    PNF26741.1    JX418002    AGL91667.1    GEDC01002486    JAS34812.1    GAPW01000219    JAC13379.1    KQ434839    KZC07959.1    DS231813    EDS25737.1    ATLV01023073    KE525340    KFB48396.1    GAKP01017557    GAKP01017555    JAC41395.1    GAKP01017556    GAKP01017554    JAC41398.1    JXUM01055928    KQ561890    KXJ77249.1    GDHF01025090    GDHF01019534    JAI27224.1    JAI32780.1    GFDL01008061    JAV26984.1    GFDL01008051    JAV26994.1    GFDL01008045    JAV27000.1    CH477822    EAT35928.1    EAT35927.1    CH379069    EAL30914.1    CH963876    EDW76937.1    FJ155496    ACI05249.1    CH954178    EDV51580.1    ADMH02001573    ETN62026.1    JXUM01069763    KQ562568    KXJ75596.1    APCN01004678    AAAB01008948    EAA10369.4    CM000159    EDW94316.1    CH480815    EDW41280.1    CP012525    ALC44346.1    GGFJ01002163    MBW51304.1    JRES01000240    KNC33049.1    GAMC01011799    JAB94756.1    GGFM01001715    MBW22466.1    CM000363    CM002912    EDX10255.1    KMY99260.1    AE014296    BT004490    AAF49900.1    AAO42654.1    AXCN02000971    AXCM01001266    KQ760478    OAD60207.1    GFDF01007634    JAV06450.1    GFDF01007635    JAV06449.1    CH902618    EDV39064.1    GBXI01003643    JAD10649.1    CH933809    EDW18132.2    CH916366    EDV97400.1    ABLF02012332    CH940647    EDW70506.2    JXJN01002268   
Pfam
PF00405   Transferrin        + More
PF00135   COesterase
PF01683   EB
Interpro
IPR018195   Transferrin_Fe_BS        + More
IPR001156   Transferrin-like_dom       
IPR016357   Transferrin       
IPR029058   AB_hydrolase       
IPR002018   CarbesteraseB       
IPR006149   EB_dom       
IPR019826   Carboxylesterase_B_AS       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
3MC2     E-value=6.87729e-35,     Score=372

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.977087
 
 
Length:
856
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.15381
Exp number, first 60 AAs:
0.43251
Total prob of N-in:
0.02063
outside
1  -  856
 
 

Population Genetic Test Statistics

Pi
271.888641
Theta
190.564681
Tajima's D
0.974707
CLR
0.032194
CSRT
0.649517524123794
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 GEPYQYSVAVVR 100.00 4e-05
26822097 YYYDVNEATCK 100.00 2e-04
29197581 DIIPDDIQIICPDGTR 100.00 2e-04
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