Gene

KWMTBOMO15646  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010697

Annotation

putative_transcription_factor_TFIIH-subunit_[Danaus_plexippus]

Location

Bomo_Chr26(+):5183687-5192631      View in EpiBrowser

Full name

Adenylyl cyclase-associated protein      

Location in the cell

Extracellular   Reliability : 1.367 PlasmaMembrane   Reliability : 1.602

CDS

ATGGCAGACGACGATGTGCCCTCCGACAGCAGTCTCCTTGTGGTAATAGTGGACACCAATCCCAATCAAAGATACATAATAGAGGACCCCAAAATGCTCACAAACGTCTTGGATGCTGTAGTAGCATTTAGTAACTCCCATTTAATGCAGAAAGCTAGTAATGAACTTGCAGTAATAGGCTGTCATTTTCATAAAAGTGAATACCTGTATCCAAGTCCTGGTAAACCTCTCGATGTAAGACAAATAGATGGACAGTATGAATTATTTACATTAGTTGAGAAGACCATCAAAATGAGATTAGTCAATTTAATCAAAAGTCAACCACAAGAAGAGAAACCCGGAGAATCATTGCTGGCCGGCGCTTTGGCACTGGGACTCTGTTTTATTGCCAGATCTCGACGTAGTGCCATTCCGGGTTTAAGGACTAGCAGCCGTATCCTCGTGGTCACGGGCAGCGCCGACACCGCTGCGCAGTACATCAACTACATGAACGTGTTCTTCACCGCACAGAAGGAGCAAGTCCTGATCGACGTGTGCTCTGTGGACAAACACTTGAGTCTGCTGCAACAGGGTTGCGACATCACGGGCGGCCTGTACCTGAAGATACCGAGCTTGGAGGGCTTGCTGCAGTACTTACTGTGGGTTTTCCTGCCGGAAGCCAATGAGAGAAGTAAACTGGTACTGCCGGGGCGGGGCCGCGTGGACTACCGCGCTGCCTGCTTCTGCCACAGGGAACTGCTCACCATCGGCTACGTCTGCTCGGTTTGCTTGAGTGTTTTCTGCAAATTCAGCCCGATATGTACAACGTGTCACACCGTCTTCAAAATAGGAGGACCACCTATCAAACCCAAGAAGAAGAAAATGAAAGTTTAA

Protein

MADDDVPSDSSLLVVIVDTNPNQRYIIEDPKMLTNVLDAVVAFSNSHLMQKASNELAVIGCHFHKSEYLYPSPGKPLDVRQIDGQYELFTLVEKTIKMRLVNLIKSQPQEEKPGESLLAGALALGLCFIARSRRSAIPGLRTSSRILVVTGSADTAAQYINYMNVFFTAQKEQVLIDVCSVDKHLSLLQQGCDITGGLYLKIPSLEGLLQYLLWVFLPEANERSKLVLPGRGRVDYRAACFCHRELLTIGYVCSVCLSVFCKFSPICTTCHTVFKIGGPPIKPKKKKMKV

Similarity

Belongs to the CAP family.

Uniprot

A0A2A4K2H9   A0A3S2NTM9   A0A2H1VT08   A0A0N1PHB8   A0A212FDF5   H9JME4   + More
A0A182JN18   A0A182LZS8   W5JDA3   A0A2M4CG01   A0A182GCT5   Q16LU5   A0A023EMJ2   A0A182GJH6   Q7PNH4   A0A182KEE0   A0A2Y9D3J7   A0A1S4GYI8   A0A2C9GSF2   A0A182UV70   A0A182ULE4   A0A182L038   A0A2M4AVG3   A0A1L8DI76   A0A1S4FWB7   A0A1Q3F218   A0A1B0CYF6   A0A182F2M3   A0A084VBE7   A0A182RCA1   B0VZZ4   A0A1B0FMP1   A0A1A9UTX8   W8BT14   A0A1I8PK45   W8BMP7   A0A182NB42   A0A182VTQ2   U5EXK1   A0A1I8N5G9   A0A034WMR9   A0A1A9WUC5   A0A0L0CG27   A0A0K8V5J7   U4UNS3   N6U406   A0A1J1ISF1   J3JY24   A0A182Y8G5   A0A139WBN9   A0A336LUC4   A0A0K8UR26   A0A182QJ23   A0A1A9XYS8   A0A1L8DIC9   B4MZJ3   A0A0M4E0F1   B4JDF2   Q9VPX4   A0A0M8ZRB5   B4P313   Q8SZ89   A0A1W4VY89   B4Q6N5   B4ID60   B3MN97   A0A3B0K1U0   B3N8C4   Q29LH3   B4KEU6   A0A1Y1L682   A0A310SCP4   A0A026X3B4   A0A1Y1L693   T1GLW4   E2B4L2   A0A087ZUP1   B4GPY6   A0A2A3E839   B4LU35   A0A0K8UDC5   A0A3B0KTT5   A0A158NHC5   F4X076   A0A195F5U4   A0A0K8VKY9   E2AMB7   A0A195D2X6   E9IMW0   A0A151X5R1   A0A151JMR5   A0A232F5S2   A0A1B6LH36   A0A1B6F944   A0A067RSA9   A0A2J7PJR3   A0A182P4P7   K7IU95   A0A3B0JWP6  

Pubmed

26354079    22118469    19121390    20920257    23761445    26483478    + More
17510324    24945155    12364791    20966253    24438588    24495485    25315136    25348373    26108605    23537049    22516182    25244985    18362917    19820115    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    15632085    28004739    24508170    20798317    21347285    21719571    21282665    28648823    24845553    20075255   

EMBL

NWSH01000220    PCG78259.1    RSAL01000087    RVE48258.1    ODYU01004268    SOQ43960.1    + More
KQ459941    KPJ19161.1    AGBW02009060    OWR51771.1    BABH01040047    BABH01040048    AXCM01000666    ADMH02001492    ETN62327.1    GGFL01000099    MBW64277.1    JXUM01054805    KQ561837    KXJ77389.1    CH477890    EAT35304.1    GAPW01003051    JAC10547.1    JXUM01012934    KQ560365    KXJ82797.1    AAAB01008964    EAA12181.5    APCN01000743    GGFK01011381    MBW44702.1    GFDF01007999    JAV06085.1    GFDL01013441    JAV21604.1    AJVK01000130    ATLV01006583    KE524368    KFB35291.1    DS231816    EDS37566.1    CCAG010018214    GAMC01006507    JAC00049.1    GAMC01006503    JAC00053.1    GANO01002500    JAB57371.1    GAKP01002106    JAC56846.1    JRES01000438    KNC31172.1    GDHF01018459    JAI33855.1    KB632294    ERL91675.1    APGK01050296    KB741169    ENN73317.1    CVRI01000055    CRL01457.1    BT128148    AEE63109.1    KQ971372    KYB25378.1    UFQS01000115    UFQT01000115    SSW99889.1    SSX20269.1    GDHF01023346    JAI28968.1    AXCN02000644    GFDF01008000    JAV06084.1    CH963920    EDW77778.1    CP012523    ALC38578.1    CH916368    EDW03322.1    AE014134    BT025234    AAF51411.2    ABF17925.1    KQ435885    KOX69540.1    CM000157    EDW87220.1    AY071043    AAL48665.1    CM000361    CM002910    EDX03301.1    KMY87428.1    CH480829    EDW45486.1    CH902620    EDV31054.2    OUUW01000004    SPP79919.1    CH954177    EDV57311.1    CH379060    EAL34072.2    CH933807    EDW12996.1    GEZM01063213    JAV69193.1    KQ761246    OAD57933.1    KK107020    EZA62506.1    GEZM01063214    JAV69192.1    CAQQ02098498    GL445574    EFN89365.1    CH479187    EDW39658.1    KZ288351    PBC27349.1    CH940649    EDW65088.2    GDHF01027675    JAI24639.1    OUUW01000695    SPP90179.1    ADTU01015573    GL888493    EGI60141.1    KQ981768    KYN35843.1    GDHF01012762    JAI39552.1    GL440811    EFN65408.1    KQ976973    KYN06714.1    GL764255    EFZ18109.1    KQ982510    KYQ55639.1    KQ978899    KYN27619.1    NNAY01000940    OXU25813.1    GEBQ01017047    JAT22930.1    GECZ01023020    JAS46749.1    KK852498    KDR22694.1    NEVH01024946    PNF16573.1    AAZX01002622    SPP79920.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000005204    UP000075880    + More
UP000075883    UP000000673    UP000069940    UP000249989    UP000008820    UP000007062    UP000075881    UP000076407    UP000075840    UP000075903    UP000075902    UP000075882    UP000092462    UP000069272    UP000030765    UP000075900    UP000002320    UP000092444    UP000078200    UP000095300    UP000075884    UP000075920    UP000095301    UP000091820    UP000037069    UP000030742    UP000019118    UP000183832    UP000076408    UP000007266    UP000075886    UP000092443    UP000007798    UP000092553    UP000001070    UP000000803    UP000053105    UP000002282    UP000192221    UP000000304    UP000001292    UP000007801    UP000268350    UP000008711    UP000001819    UP000009192    UP000053097    UP000015102    UP000008237    UP000005203    UP000008744    UP000242457    UP000008792    UP000005205    UP000007755    UP000078541    UP000000311    UP000078542    UP000075809    UP000078492    UP000215335    UP000027135    UP000235965    UP000075885    UP000002358   

PRIDE

H9JME4    Q9VPX4    Q8SZ89   

Pfam

PF03850   Tfb4        + More
PF00640   PID
PF14719   PID_2
PF01213   CAP_N
PF08603   CAP_C

Interpro

IPR004600   TFIIH_Tfb4/GTF2H3        + More
IPR036465   vWFA_dom_sf       
IPR006020   PTB/PI_dom       
IPR011993   PH-like_dom_sf       
IPR006599   CARP_motif       
IPR036222   CAP_N_sf       
IPR016098   CAP/MinC_C       
IPR013992   Adenylate_cyclase-assoc_CAP_N       
IPR036223   CAP_C_sf       
IPR001837   Adenylate_cyclase-assoc_CAP       
IPR028417   CAP_CS_C       
IPR013912   Adenylate_cyclase-assoc_CAP_C       
IPR017901   C-CAP_CF_C-like       
IPR018106   CAP_CS_N       

SUPFAM

SSF101278   SSF101278        + More
SSF69340   SSF69340       
SSF53300   SSF53300       

Gene 3D

3.40.50.410     2.30.29.30     1.25.40.330     2.160.20.70    

ProteinModelPortal

A0A2A4K2H9   A0A3S2NTM9   A0A2H1VT08   A0A0N1PHB8   A0A212FDF5   H9JME4   + More
A0A182JN18   A0A182LZS8   W5JDA3   A0A2M4CG01   A0A182GCT5   Q16LU5   A0A023EMJ2   A0A182GJH6   Q7PNH4   A0A182KEE0   A0A2Y9D3J7   A0A1S4GYI8   A0A2C9GSF2   A0A182UV70   A0A182ULE4   A0A182L038   A0A2M4AVG3   A0A1L8DI76   A0A1S4FWB7   A0A1Q3F218   A0A1B0CYF6   A0A182F2M3   A0A084VBE7   A0A182RCA1   B0VZZ4   A0A1B0FMP1   A0A1A9UTX8   W8BT14   A0A1I8PK45   W8BMP7   A0A182NB42   A0A182VTQ2   U5EXK1   A0A1I8N5G9   A0A034WMR9   A0A1A9WUC5   A0A0L0CG27   A0A0K8V5J7   U4UNS3   N6U406   A0A1J1ISF1   J3JY24   A0A182Y8G5   A0A139WBN9   A0A336LUC4   A0A0K8UR26   A0A182QJ23   A0A1A9XYS8   A0A1L8DIC9   B4MZJ3   A0A0M4E0F1   B4JDF2   Q9VPX4   A0A0M8ZRB5   B4P313   Q8SZ89   A0A1W4VY89   B4Q6N5   B4ID60   B3MN97   A0A3B0K1U0   B3N8C4   Q29LH3   B4KEU6   A0A1Y1L682   A0A310SCP4   A0A026X3B4   A0A1Y1L693   T1GLW4   E2B4L2   A0A087ZUP1   B4GPY6   A0A2A3E839   B4LU35   A0A0K8UDC5   A0A3B0KTT5   A0A158NHC5   F4X076   A0A195F5U4   A0A0K8VKY9   E2AMB7   A0A195D2X6   E9IMW0   A0A151X5R1   A0A151JMR5   A0A232F5S2   A0A1B6LH36   A0A1B6F944   A0A067RSA9   A0A2J7PJR3   A0A182P4P7   K7IU95   A0A3B0JWP6  

PDB

6O9M     E-value=1.81409e-65,     Score=631

KEGG

101735747    K03143 transcription initiation factor TFIIH subunit 3 | (RefSeq) general transcription factor IIH s

PATHWAY

03022    Basal transcription factors - Bombyx mori (domestic silkworm)
03420    Nucleotide excision repair - Bombyx mori (domestic silkworm)

GO

GO:0000439   GO:0006289   GO:0006355   GO:0005675   GO:0070816   GO:0000902   GO:0007010   GO:0003779   GO:0009411   GO:0016887   GO:0006366   GO:0001111   GO:0005634   GO:0008353   GO:0006367   GO:0001113   GO:0006468   GO:0016020   GO:0020037   GO:0030117   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

PANTHER

PTHR12831   PTHR10652  

Length:

290

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.29408

Exp number, first 60 AAs:

0.00746

Total prob of N-in:

0.08140

outside

1  -  290

 

 

Pi

238.11605

Theta

177.343363

Tajima's D

1.188428

CLR

0.384356

CSRT

0.708214589270536

Interpretation

Uncertain