Gene

KWMTBOMO15645

Pre Gene Modal

BGIBMGA010696

Annotation

PREDICTED:_uncharacterized_protein_LOC105202492_[Solenopsis_invicta]

Location

Bomo_Chr26(+):5177677-5180247      View in EpiBrowser

Transcription factor

HTH

Location in the cell

Nuclear   Reliability : 3.971

CDS

ATGCCTAATAAATACAAGAGAAAGGCAGTGGCTGTGAGAGGAAATTGGTCGGAAGAATCACTAAAAGCAGCTATTAATGCTGTGAAAAATGATGGATTATCCGTACGCGCGGCTAGTCTCCAGTATCAGATACCTAGAAAGGCATTAGAACGAAAGCTAAAGAAGAATGACGACAAGAAAGGCCCTATGGGACCACCTACTTTATTCGGAGAACAAAATGAGAAAAAATTGGTTGCTCATATTAAAACAATATTTAACAAAGACAATCAGAAAGCAGGATATGACTGGTTGCAGTTGTTCTTGAGCAGAAATACTGATATTGCACTTAGGAAGTCAGAAGGAGTTTCTTTGGCTAGAGTCAATGGCATGAATAGATCAGAAGTTAATGCATATTTTAAATTGCTTGAAAGCGTCCTTATCCATGAGAATGAGATGCTACCTCCTAACTGCGTATTTAACATGGATGAATCTGGCCTACAGTTAAATAGTCGTCCGGGGCACGTGCTTGCTCAAAAAGGTTCTAAAGCTGTTTCCACAGTGACATCAACTGAAAAAGGGGAGACAATAACCATTATAGCCTGCTGCAATGCAGAAGGCACGTTCTTGCCACCTGCCTGTATCATGAAAGGAAAAAATAAAAAGCCTGAGTTTGAAGACGGAATGCCTCCAGGATCAAAACTATTCATGTCACAAAAATCAGCATATATAATATCAGAAATATTTTTAGAATGGTTAAAAACACACTTTGTTCCAAGGAAACCAGCCGGGAAAGTTGTCCTTCTGTTAGACGGCCACTCAACTCATTCCAATTCTGTGGAAATGTTGGAATATGCCATTCAGAATGACATTATTTTGGTATCAATGCCTAGTCACACGTCTCATTATCTCCAGCCCTTAGATCGTTCTGTTTTTAAACCACTAAAACATCACTTTTATGAACAGTCTAGACTTTGGTTAATCCACAACCCAGGACGTCGAATATCGAGACTTTCTTTCGGAGTTTTGCTTAGCAAGGCTTGGGGAAAGGCAGCATCGTCGGAAAATGCAATTGCTGGTTTTAAAGCGACTGGAGTGTATCTTCTTAACCCAGAAGTGGTGCCAGATTATGCGTTTTTTCAAGAATCTACAGGTGACTCGACGAATACTTCTGTTACACAAGTGCTTTCACATTGTAAATCTGCTGTGGACAATGAGATACCAGGTTGTTCTTATGAACCAATAATAGATGAAACAAAATATAGCTCTGAAACCGTGTCTACAAAATCCTCCGTTAAAACTGCCACGATGTCTAATATGTCTCACCCGAGTACTCCGAAAGAAGCTTCGTTCAGTAAGAATCCAGACTACACCCCATCTCGAATTTTACAGGATATATCACCTATTCCACAAAAACTGATTCAGGTGCGTAAACGAGCAAAGCAAGTTGGAACACTATTGACTTCGGAAGAACACATCAAAACTAGAAAAAATGCTGCAGAAAAAAAGGAAAACGTAAAAAAATGTGTCAAAACAAAGCAGGAAAAAAAAACTGTTCTATGTATAAAAAGAAAAGCCATTCGAAGACTATCTGAGAATAGTGACGAAATTCCATTAAAAATATTGTCAGTTAAGAATGAGAAAAGAAAGCTAGATGAAAAGGATAACTGTCGTGGGTGTGGTGAAAATTACTACGAAACACTTCTCATTGAAGACTGGCTTCAATGTACAGTCTGTCAGTATTGGGTTCACGAACACTGCACTGAATTTGAAACGACGTGCTCCAGATGTGGCGAAGAGGAGAAAACAAGACTTAAAAATAGAAAATGA

Protein

MPNKYKRKAVAVRGNWSEESLKAAINAVKNDGLSVRAASLQYQIPRKALERKLKKNDDKKGPMGPPTLFGEQNEKKLVAHIKTIFNKDNQKAGYDWLQLFLSRNTDIALRKSEGVSLARVNGMNRSEVNAYFKLLESVLIHENEMLPPNCVFNMDESGLQLNSRPGHVLAQKGSKAVSTVTSTEKGETITIIACCNAEGTFLPPACIMKGKNKKPEFEDGMPPGSKLFMSQKSAYIISEIFLEWLKTHFVPRKPAGKVVLLLDGHSTHSNSVEMLEYAIQNDIILVSMPSHTSHYLQPLDRSVFKPLKHHFYEQSRLWLIHNPGRRISRLSFGVLLSKAWGKAASSENAIAGFKATGVYLLNPEVVPDYAFFQESTGDSTNTSVTQVLSHCKSAVDNEIPGCSYEPIIDETKYSSETVSTKSSVKTATMSNMSHPSTPKEASFSKNPDYTPSRILQDISPIPQKLIQVRKRAKQVGTLLTSEEHIKTRKNAAEKKENVKKCVKTKQEKKTVLCIKRKAIRRLSENSDEIPLKILSVKNEKRKLDEKDNCRGCGENYYETLLIEDWLQCTVCQYWVHEHCTEFETTCSRCGEEEKTRLKNRK

Uniprot

H9JME3   A0A2H1X459   A0A3L8DSU8   A0A1Y1JVK5   A0A212EU96   J9KB99   + More
A0A146KT86   A0A2H8TEI8   A0A2H1VWF9   A0A1Y1LFM2   J9LG75   J9KKA5   A0A1Y1MUL7   A0A3L8DD48   T1EQM1   A0A1S3D1W0   A0A1Y1NGN4   A0A1Y1NJC0   A0A1B6ISM7   A0A1Y1NBD5   A0A2A4J258   A0A2A4J1M3   A0A2H1VTA0   J9JKJ5   H9JME9   A0A2A4J6W1   A0A194RH46   A0A2A4K4E0   A0A1W4XA29   A0A2W1BH88   A0A2H9T3C2  

Pubmed

19121390    30249741    28004739    22118469    26823975    23254933    + More
26354079    28756777    29150518   

EMBL

BABH01040047    ODYU01013314    SOQ60022.1    QOIP01000004    RLU23500.1    GEZM01099403    + More
GEZM01099402    JAV53344.1    AGBW02012433    OWR45073.1    ABLF02022753    GDHC01018928    JAP99700.1    GFXV01000711    MBW12516.1    ODYU01004859    SOQ45169.1    GEZM01058773    JAV71681.1    ABLF02009840    ABLF02016204    ABLF02006839    GEZM01026324    JAV87047.1    QOIP01000010    RLU18063.1    AMQM01000642    KB096324    ESO06516.1    GEZM01002997    JAV97001.1    GEZM01002998    JAV97000.1    GECU01017774    JAS89932.1    GEZM01007306    JAV95254.1    NWSH01003844    PCG65768.1    PCG65769.1    ODYU01004314    SOQ44057.1    ABLF02004627    ABLF02004628    ABLF02034930    BABH01016912    NWSH01002933    PCG67263.1    PCG67264.1    KQ460205    KPJ16902.1    NWSH01000193    PCG78522.1    KZ150051    PZC74412.1    NSIT01000429    PJE77687.1   

Proteomes

UP000005204    UP000279307    UP000007151    UP000007819    UP000015101    UP000079169    + More
UP000218220    UP000053240    UP000192223   

PRIDE

H9JME3    H9JME9   

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF03221   HTH_Tnp_Tc5
PF02338   OTU

Interpro

IPR009057   Homeobox-like_sf        + More
IPR007889   HTH_Psq       
IPR002219   PE/DAG-bd       
IPR004875   DDE_SF_endonuclease_dom       
IPR006600   HTH_CenpB_DNA-bd_dom       
IPR011011   Znf_FYVE_PHD       
IPR001965   Znf_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR003323   OTU_dom       

SUPFAM

SSF46689   SSF46689        + More
SSF57903   SSF57903       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9JME3   A0A2H1X459   A0A3L8DSU8   A0A1Y1JVK5   A0A212EU96   J9KB99   + More
A0A146KT86   A0A2H8TEI8   A0A2H1VWF9   A0A1Y1LFM2   J9LG75   J9KKA5   A0A1Y1MUL7   A0A3L8DD48   T1EQM1   A0A1S3D1W0   A0A1Y1NGN4   A0A1Y1NJC0   A0A1B6ISM7   A0A1Y1NBD5   A0A2A4J258   A0A2A4J1M3   A0A2H1VTA0   J9JKJ5   H9JME9   A0A2A4J6W1   A0A194RH46   A0A2A4K4E0   A0A1W4XA29   A0A2W1BH88   A0A2H9T3C2  

KEGG

105841434    no KO assigned | (RefSeq) uncharacterized LOC105841434

GO

GO:0035556   GO:0003677   GO:0003676   GO:0046872   GO:0005634   GO:0016021   GO:0043565   GO:0016020   GO:0020037   GO:0030117   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

Subcellular location

Nucleus  

Length:

601

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00541999999999999

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.01337

outside

1  -  601

 

 

Pi

581.848816

Theta

228.310752

Tajima's D

4.902524

CLR

0

CSRT

0.999950002499875

Interpretation

Uncertain