SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15630
Pre Gene Modal
BGIBMGA010707
Annotation
PREDICTED:_2-aminoethanethiol_dioxygenase_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.089
 

Sequence

CDS
ATGGATATTAAGAATGAAACCAAGCCAACCATGGAAATTACTAACATACCGCCTATTGTATCAATATACCGGCACGCAATGCGCACCTTTGATGACAATTTCAAAATGGATTTCACGACCAACTTAAATAAGTTAAAATCTATGATGGATCACCTCAAAGCTGAAGATTTCGCATTCGATAATAGCCTCAACGATATCGAGACATGGAGGCAGCCGCTTAAAGCCCCATGTACGTACATTAAAGTGTTTGAAGACTATCAGATAAATATGAGCATTTTCGTGTTAAAACCTGGTTTTCGAATGCCTCTCCACGATCACCCTCGTATGCATGGACTATTGAAAGTGATTACTGGTGCAGTGAATATACGGAGTTTCTCTGAGTACCCATTAACAGAACAGGTGAGTAGCTTAGACCTCAAGGTGCGCGCGAGATTCGAGGCAGCTCGTTTGGCACGGGGTATTCACAGAAGGAGAAGGCTTTTCGCGGAAGTGACGGCTGATCGTGTGTGTAAGGCCAATGCTGAGACCTGCATCCTCACTCCAACAATATCAAATTACCACGAAATCGAGGCCTTGGATATGCCTGCAGCATTCTTTGATATACTTTCACCACCATACGATACGATGATTGAAGGTATAGGTCCTAGAAGGTGCCGGTATTATGAAGTGGCTAACGTAATAAGTAGTAATCTAGTTGAATTGGAGGAGATAGAAGTGCCAAAATGTTTTTATTGTGATCAAGCACCATACTTAGGGCCCACACTTGCTTAG
Protein
MDIKNETKPTMEITNIPPIVSIYRHAMRTFDDNFKMDFTTNLNKLKSMMDHLKAEDFAFDNSLNDIETWRQPLKAPCTYIKVFEDYQINMSIFVLKPGFRMPLHDHPRMHGLLKVITGAVNIRSFSEYPLTEQVSSLDLKVRARFEAARLARGIHRRRRLFAEVTADRVCKANAETCILTPTISNYHEIEALDMPAAFFDILSPPYDTMIEGIGPRRCRYYEVANVISSNLVELEEIEVPKCFYCDQAPYLGPTLA

Summary

EMBL
BABH01016898    NWSH01007463    PCG62959.1    ODYU01003314    SOQ41904.1    KQ459941    + More
KPJ19153.1    GDQN01004018    JAT87036.1    KQ459193    KPJ03164.1    JTDY01000287    KOB77898.1    GDQN01010730    JAT80324.1    AGBW02012063    OWR45744.1    GALX01006444    JAB62022.1    GEZM01102898    JAV51740.1    KQ971372    EFA09634.1    CH477269    EAT45388.1    CH477566    EAT38929.1    GDAI01002710    JAI14893.1    GDUN01000465    JAN95454.1    JXUM01059290    KQ562045    KXJ76818.1    CCAG010017310    JRES01000997    KNC26291.1    GFDL01012176    JAV22869.1    APGK01052696    KB741213    KB631874    ENN72672.1    ERL86867.1    JXJN01001782    GDHF01020421    JAI31893.1    DS231886    EDS43324.1    AAAB01008807    EAU77700.2    APCN01003620    GAKP01003703    JAC55249.1    GL448836    EFN83662.1    GEBQ01020589    GEBQ01003154    JAT19388.1    JAT36823.1    ATLV01024521    KE525352    KFB51553.1    GGFK01012537    MBW45858.1    LBMM01012507    KMQ86185.1    AXCM01002040    GGFL01002896    MBW67074.1    GECZ01007033    JAS62736.1    ADMH02001223    ETN63595.1    GGFL01002641    MBW66819.1    GGFL01002640    MBW66818.1    GECU01008296    JAS99410.1    KB202444    ESO90404.1    GL438494    EFN68891.1    AXCN02000573    GDKW01002133    JAI54462.1    ACPB03007651    GAHY01001917    JAA75593.1    MWRG01017583    PRD23474.1    CH963876    EDW76709.1    AJWK01023506    GFDF01010398    JAV03686.1    GBBI01000927    JAC17785.1    GGMS01009169    MBY78372.1    GAMD01003316    JAA98274.1    GEDC01026311    GEDC01022393    GEDC01019938    GEDC01010939    JAS10987.1    JAS14905.1    JAS17360.1    JAS26359.1    KK852902    KDR14049.1    NNAY01001051    OXU25330.1    KQ417492    KOF91717.1    AAZX01012106    KQ979701    KYN19514.1    AMQN01010754    KB308480    ELT97719.1    CP012525    ALC43428.1    ADTU01027806    GGLE01005061    MBY09187.1    KQ977329    KYN03526.1    CH940647    EDW69485.1    KQ982718    KYQ51705.1    GANO01000627    JAB59244.1    KQ976606    KYM79325.1    NEVH01013262    PNF29124.1    CAEY01000677    KZ288293    PBC28993.1    GFJQ02001298    JAW05672.1    KK856508    PTY25931.1    CH916366    EDV96290.1    AAGJ04064386    PYGN01000235    PSN50528.1    GGMS01017019    MBY86222.1    CH933809    EDW18598.1    KQ981477    KYN41442.1    KQ414731    KOC62427.1    GFAA01002002    JAU01433.1    QCYY01002113    ROT72779.1   
Pfam
PF07847   PCO_ADO        + More
PF04939   RRS1
Interpro
IPR012864   PCO/ADO        + More
IPR014710   RmlC-like_jellyroll       
IPR011051   RmlC_Cupin_sf       
IPR007023   Ribosom_reg       
SUPFAM
SSF51182   SSF51182       
Gene 3D

Ontologies

Topology

Length:
256
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02278
Exp number, first 60 AAs:
0.01801
Total prob of N-in:
0.13679
outside
1  -  256
 
 

Population Genetic Test Statistics

Pi
215.045639
Theta
232.991088
Tajima's D
-0.184586
CLR
386.489804
CSRT
0.31868406579671
Interpretation
Uncertain
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