SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15628
Annotation
PREDICTED:_uncharacterized_protein_LOC101742999_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.178
 

Sequence

CDS
ATGGACATTAAAGATATTCCAGACCATATTAATAAAGAAGCACACAGAAATAACAAATTGAATCCTGATATTATAAAAGAAAAACCAAAAGGATACTATGCGATTGGTAGAGTTGTTTTAAAAGATAAAAAAATATCAGAATATATTTGGAATGGAATTGTAAATAACAAATGTGTGATTTGTGATGTTACTTTAGATGATGATATGATCAAACATTGTACATTACCTGACCATATTGTTAAACTGATTGAAACTGAAGTTGATTTTCAAAATGAACAGGGCTATAGGAAGGTAAATTTGGAATGCTATCATTGTTTCATGTGCAACCAATTATTTAATCCTGAAACATTTTTTGAACACTACTGTTGCAAACCAGAAAAAACTGTTGCAACTGTAACTAATAAGTGTAAAACCACTGGAAGAAAACTATTGAATTTAATAGCCCAAGCAAATAAAGCACCCAGAGTAAAATCAAATTTAGGCGATATTGTTGAAGAGGAATCATCTGTGATGTGTGAAGTTTGCAATGAAGAAATACCTTATGATTTTGAGGTATTCTTTAACCACATGCAGAGACATAATTATGAAGCAAGTCAAATGAACCTTATACAGATAGCTGATACTGAACGGCAGGTAATTGACCACGGAAAACTTAGTGTGAAGAATGACAGTTTTATGCTGATGAACAAGATTGAACATGGTCCTCATTATAAAAAGACCAAATGTTATGCATGTGATGTGTCTATGGCATTGGGTACTGAATACCTACATTGTAGAACAGAAGAGCATAAGAAAAATGTCATGTCTAGTACAGTAATCCTTCATGAAGATAACAATTTTGTAAGAGAGATCAGACCAAACTTGTATCACTGTGGTTGTTGCAATTTAACATTTCCATTCATAAATATTTTGAAGAGGCACATCACATCTTTTAGTCACCTGGCAAAAATACGAGAATGCAATATTGCCAATCTATTGATAATTTTCCTCAAGAAATATGGAGTCCCTGCATATTCTGAACAACTCGCTATAAGCTCTAATATAGATAATTTATATATTCAAATTATGAAGTCAGTTTATGGAAAACACATCATTTAA
Protein
MDIKDIPDHINKEAHRNNKLNPDIIKEKPKGYYAIGRVVLKDKKISEYIWNGIVNNKCVICDVTLDDDMIKHCTLPDHIVKLIETEVDFQNEQGYRKVNLECYHCFMCNQLFNPETFFEHYCCKPEKTVATVTNKCKTTGRKLLNLIAQANKAPRVKSNLGDIVEEESSVMCEVCNEEIPYDFEVFFNHMQRHNYEASQMNLIQIADTERQVIDHGKLSVKNDSFMLMNKIEHGPHYKKTKCYACDVSMALGTEYLHCRTEEHKKNVMSSTVILHEDNNFVREIRPNLYHCGCCNLTFPFINILKRHITSFSHLAKIRECNIANLLIIFLKKYGVPAYSEQLAISSNIDNLYIQIMKSVYGKHII

Summary

Pfam
PF06220   zf-U1        + More
PF12756   zf-C2H2_2
Interpro
IPR013085   U1-CZ_Znf_C2H2        + More
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal

Ontologies

Topology

Length:
365
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01957
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.01389
outside
1  -  365
 
 

Population Genetic Test Statistics

Pi
142.834983
Theta
183.354564
Tajima's D
-1.222004
CLR
315.332287
CSRT
0.0994950252487376
Interpretation
Uncertain
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