SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO15626  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010845
Annotation
PREDICTED:_protein_BCCIP_homolog_[Amyelois_transitella]
Full name
Protein BCCIP homolog      
Location in the cell
Nuclear   Reliability : 2.803
 

Sequence

CDS
ATGCCTAATAAAAAGAACAAGGAAATTGACACAAACAGCGAAAGCGAAAAGGAACAAGATTCAGGCAGCGAAAAAGATTCTGATTTTGATTCAGACGGCAACTATGTCGGTGAAAAAGAGCTACAGGCTGATTTCGAAGGACGTAACCCAGAAGATAGTGACTTCCACGGTATTAAGCAGCTACTGAGGCAACTGTTTCTGAAATCAAATGTTGACCTTGGAGGGCTAGCCCAAATTATTATATCACAAAATTACATAGGCAGTGTTGTGAAGCAATGTTTGGATGATGGTCAAGAGGATGACGATGATGAGGACGATGGTAGTGATGGAGTTTTTGGAGTAACTACAGTAGTGAATATTACTAAAAGAAAAAATGAACCCAGTGTGGCACAGATCAGAGAATTGCTTACAAAACTATCTCAGGAGAATGCAGATCCCAGAACCAAAGAATTAATTAAATATATTCTGGCTGATGATTCTCAGCATACTGGCCTAGTTATTAATGAAAGAATACTAAACATTCCTGCAGCGATTAGCGTACCATTATTTGCATCACTACAGACTGAACTTGAGAAAGCTCATAGGAAAAATATGCTATACAACTTTAAATACCTTATTTGGATCAGTAAAACTTACACTACTGGAGAGTCATCAGAAGTGCTTTTTGCAAATCAAGAAGAGAAGTCTTTAGTAAGCGAAGCAATTGCTAGTTTTGATGTAGATGTAACCGACCAAGCTGACTTATCACAATGGGATTATGAAGGAGGAGCACTTACTCCTTGTCGAAAGATTTTACTATTTGAAGGTATCAAGTTTGGTTATCTCATCGATCTGATGAAGGCAGAAGTTGAAAGCATGTAA
Protein
MPNKKNKEIDTNSESEKEQDSGSEKDSDFDSDGNYVGEKELQADFEGRNPEDSDFHGIKQLLRQLFLKSNVDLGGLAQIIISQNYIGSVVKQCLDDGQEDDDDEDDGSDGVFGVTTVVNITKRKNEPSVAQIRELLTKLSQENADPRTKELIKYILADDSQHTGLVINERILNIPAAISVPLFASLQTELEKAHRKNMLYNFKYLIWISKTYTTGESSEVLFANQEEKSLVSEAIASFDVDVTDQADLSQWDYEGGALTPCRKILLFEGIKFGYLIDLMKAEVESM

Summary

Similarity
Belongs to the BCP1 family.
Keywords
Complete proteome   Reference proteome  
Feature
chain  Protein BCCIP homolog
EMBL
BABH01016873    BABH01016874    BABH01016875    NWSH01001752    PCG70245.1    RSAL01000087    + More
RVE48270.1    GAIX01014208    JAA78352.1    KQ459193    KPJ03159.1    ODYU01012390    SOQ58674.1    AGBW02009517    OWR50608.1    KQ459941    KPJ19148.1    JTDY01001727    KOB73068.1    NNAY01005043    OXU17072.1    GL447255    EFN86727.1    AAZX01004931    GECZ01004563    JAS65206.1    KQ434899    KZC10982.1    KQ414617    KOC68276.1    GECU01037683    JAS70023.1    GECU01011744    JAS95962.1    LBMM01002945    KMQ94151.1    GEBQ01009231    JAT30746.1    KZ288203    PBC33361.1    GDKW01001639    JAI54956.1    ACPB03014253    GAHY01001352    JAA76158.1    NEVH01024946    PNF16572.1    KQ759879    OAD62235.1    KQ977141    KYN05334.1    KQ978700    KYN29145.1    GL438828    EFN68188.1    GL888802    EGI58010.1    GFTR01004767    JAW11659.1    GECL01002900    JAP03224.1    ADTU01005706    KK852498    KDR22692.1    KQ971371    EFA09984.1    GBBI01000837    JAC17875.1    KQ976667    KYM78265.1    KQ981200    KYN45049.1    JXJN01016622    GEMB01002724    JAS00471.1    KQ982691    KYQ52026.1    KK107145    QOIP01000010    EZA57498.1    RLU17420.1    EZ423343    ADD19619.1    GEZM01076299    JAV63781.1    LJIG01009606    KRT82743.1    JRES01001623    KNC21372.1    ATLV01016551    KE525093    KFB41421.1    JXUM01139239    KQ568865    KXJ68855.1    GAPW01002728    JAC10870.1    EZ423342    ADD19618.1    AAAB01008851    EAA07345.3    APCN01002215    PYGN01002782    PSN29979.1    AXCM01003454    GFDF01010065    JAV04019.1    AE014297    AY069286    GANO01002175    JAB57696.1    GFDL01012763    JAV22282.1    GDAI01000923    JAI16680.1    CCAG010019310    GAKP01010482    GAKP01010481    JAC48470.1    CH480815    EDW42264.1    KA648290    AFP62919.1    DS232254    EDS38515.1    CM000364    EDX13025.1    ADMH02002206    ETN57824.1    GGFJ01007847    MBW56988.1    GDHF01033425    GDHF01015341    JAI18889.1    JAI36973.1    GBXI01011136    JAD03156.1    GGFK01006508    MBW39829.1    GAMC01004462    JAC02094.1    CH954181    EDV49173.1    CM000160    EDW97290.1    GBGD01002324    JAC86565.1    CP012526    ALC46806.1    GGFM01003606    MBW24357.1    GGFM01003654    MBW24405.1    CH916377    EDV90693.1    CH477258    EJY57446.1    APGK01043263    KB741014    ENN75390.1    CH902617    EDV43697.1    DS235767    EEB16732.1    GEFM01005339    JAP70457.1   
Pfam
PF13862   BCIP
Interpro
IPR025602   BCP1_family       

Ontologies

Topology

Length:
286
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07925
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12852
outside
1  -  286
 
 

Population Genetic Test Statistics

Pi
223.931588
Theta
197.471056
Tajima's D
0.299978
CLR
23.242787
CSRT
0.458727063646818
Interpretation
Uncertain
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