Gene

KWMTBOMO15619

Pre Gene Modal

BGIBMGA010714

Annotation

hypothetical_protein_KGM_19412_[Danaus_plexippus]

Location

Bomo_Chr26(-):4303822-4305058      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.157

CDS

ATGGTTGGCCCGATGTTGTTGTTTAAAATGCTTCATTGTAAACATTTAAGAAAAACTTTAGAAAAGTCAAACAAGGGACTGTCTAGCCAATGTTCAAATAACATCTATATAAAAAAAGAATTTGATGATACTTCATGTAGAATTTGTTTGAAAGAAGGTTGCATACCAATCTACAGCAACGACGAAATACCACAGGCTTTAAGCTCTTTTGGCGGCATATTTGTAAGTATCAGCGACCCGTACCCGAAATATTTGTGCCAGCCGTGCTACTCTCTGCTCCAAGGTGCAATGCTATTCAGAAAAAATGCTCAACGTTCCGATGAGATACTTAAACATCCCATAGAAGATAATTCAGAAGACACTATTCATGACAATGATCTGACCGATCCATGCTTTGATGACGATTTATACGATTATGATATATTCAAAATTACAAAGAAGCAAGACAAAAAGCCAAAAGATTACTATTGTAAAAAATGTAACATGGAATTTAAAACACATGATGAATATACGGAACATAGGCTTTCAGATGAACATGATAATCTTAGACACACTTGTCAAATATGCAACAAGTCATATAGAGCAGAATATTTAAAAAAACACATGAAAACCCATATCCAAGATCCTCCTTACATGTGTGATATATGTGGTAAAAAATTCAAAGTCCAGGGACACTTCTCTCGGCATAGAGTGACACACTTCTATGAATTGCCATACCAATGTAGTTTGTGTCCTTACAAAGGCAGATTTAGTGAATCCCTAAAGATGCACATGAGATCACATACAGGAGAAAAACCATATCAATGTGTTCAATGCCCTTCACGTTTCATAAATAAGAGTAATTTGAACAAGCATATGCTAACGCACAAAGGACAGCATGATTTTAAATGTGATTCATGTGGACGAGGATTCTACACAAAAAGAGAACTGGAGTTACATTTTAAAGTTGATCATACTGGGATAAAGGACCATGTCTGCAATATATGTGGGAAAGCTTTTGGATACAGGAAACAAATGATGAAACATCAATTAAAAGTTCATAAAAGAGAAAAATTAAGGAGCGGTAGAACTCCTCTCTATGTCAAATTAGAATTGATGAAGCAAAAAGGAGAAGAATTAATAAACAACCATTAA

Protein

MVGPMLLFKMLHCKHLRKTLEKSNKGLSSQCSNNIYIKKEFDDTSCRICLKEGCIPIYSNDEIPQALSSFGGIFVSISDPYPKYLCQPCYSLLQGAMLFRKNAQRSDEILKHPIEDNSEDTIHDNDLTDPCFDDDLYDYDIFKITKKQDKKPKDYYCKKCNMEFKTHDEYTEHRLSDEHDNLRHTCQICNKSYRAEYLKKHMKTHIQDPPYMCDICGKKFKVQGHFSRHRVTHFYELPYQCSLCPYKGRFSESLKMHMRSHTGEKPYQCVQCPSRFINKSNLNKHMLTHKGQHDFKCDSCGRGFYTKRELELHFKVDHTGIKDHVCNICGKAFGYRKQMMKHQLKVHKREKLRSGRTPLYVKLELMKQKGEELINNH

Uniprot

H9JMG1   A0A2H1W341   S4PGP2   A0A0L7LRQ9   A0A194PK55   A0A194RP61   + More
A0A2H1VT86   A0A1E1WIZ6   A0A194RQM6   A0A1E1W6T3   A0A194PJV7   A0A2A4JG74   A0A0L7KN53   A0A212EYL8   H9JMG6   S4PD46   A0A2H1WH54   A0A2A4JFN6   A0A2A4JER5   A0A1E1WFQ3   A0A0L7K2S7   A0A1E1WB12   A0A194PJ02  

Pubmed

19121390    23622113    26227816    26354079    22118469   

EMBL

BABH01016863    ODYU01005946    SOQ47366.1    GAIX01003572    JAA88988.1    JTDY01000233    + More
KOB78143.1    KQ459601    KPI93702.1    KQ459875    KPJ19633.1    ODYU01004307    SOQ44037.1    GDQN01004061    JAT86993.1    KPJ19615.1    GDQN01008348    JAT82706.1    KPI93716.1    NWSH01001646    PCG70574.1    JTDY01008160    KOB64707.1    AGBW02011486    OWR46570.1    BABH01016826    GAIX01003806    JAA88754.1    ODYU01008528    SOQ52212.1    PCG70576.1    PCG70575.1    GDQN01005232    JAT85822.1    JTDY01015286    KOB51959.1    GDQN01006898    JAT84156.1    KQ459603    KPI93028.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000218220    UP000007151    + More

PRIDE

H9JMG1    H9JMG6   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR013087   Znf_C2H2_type       
IPR012934   Znf_AD       

SUPFAM

SSF57667   SSF57667       

ProteinModelPortal

H9JMG1   A0A2H1W341   S4PGP2   A0A0L7LRQ9   A0A194PK55   A0A194RP61   + More
A0A2H1VT86   A0A1E1WIZ6   A0A194RQM6   A0A1E1W6T3   A0A194PJV7   A0A2A4JG74   A0A0L7KN53   A0A212EYL8   H9JMG6   S4PD46   A0A2H1WH54   A0A2A4JFN6   A0A2A4JER5   A0A1E1WFQ3   A0A0L7K2S7   A0A1E1WB12   A0A194PJ02  

PDB

2I13     E-value=2.75735e-24,     Score=277

KEGG

101742422    no KO assigned | (RefSeq) gastrula zinc finger protein XlCGF17.1-like

GO

GO:0005634   GO:0008270   GO:0003676   GO:0046872   GO:0030126   GO:0030117   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

Length:

377

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4e-05

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00140

outside

1  -  377

 

 

Pi

155.402166

Theta

158.814467

Tajima's D

-0.067575

CLR

0.096837

CSRT

0.352532373381331

Interpretation

Uncertain