Gene

KWMTBOMO15616  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010839

Annotation

PREDICTED:_vesicular_integral-membrane_protein_VIP36_[Papilio_xuthus]

Location

Bomo_Chr26(+):4268429-4272830      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.08

CDS

ATGAAGTTGGACTTTTCAACAATGATTCATCAGAGAATAAGCTGGGTGCAAATCCTTTGCGCTACGTTATTTCTCAACCCAATATTTGCAGAATGGAATACAAGGGACTACATAAGAAGAGAGCATTCACTGACAAAACCCTATCAAGGTAGTGGAATGTCCTTGCCATATTGGGATTTTTTAGGTAGTACAATTGTAACCTCGAATTATGTGCGTCTAACACCCGATTTGCAATCAAAAGCTGGTGCTCTATGGAATACTGTTCCCTGTAACACTAGAAATTGGGAACTGCAGGTGCAATTCAAAGTGCATGGTCGAGGAAAAGAGCTATTTGGTGATGGATTTGCAATATGGTATGTCAAAGAGAGAATGGAAAGTGGCCCTGTATTTGGCAGTAAGGACTACTTCAATGGCTTAGCAATCATACTCGACACATACAGCAACCACAATGGTGCTCATAATCACCAGCATCCATACATATCAGCAATGGTAAATAATGGAACACTCCACTACGACCACGATCGTGATGGAACCCACACTCAGCTCTCTGGCTGCGAAGCAAAGTTTCGAAATTTCAACCATGATTCACATATTTCTATAGTGTATAGGGATGATACACTTATTGTATCAACTGATTTGGAAGGCAAGAATGCCTGGAAGGAATGTTTGAAAGTGGAGAATGTCCTGTTGCCTACTGGTTACTACTTTGGTGCCTCTGCCACTACTGGAGACTTAAGTGATAATCATGACATTATCTCTATAAAAATGTTTGAACTTGATCTACTTGAATCTCAAAAAAAAGACGAAGATAGATCTCACATTATCCCTTCAGCAGCCTCATTCGAAGCACCACGCGAACGCATCGAAGACGCCAAGCCAGCCATGTCAGGCATCAAAACATTCCTCTGGATGATGTTTGTTGCCATTGTAATCATTGTGCTAGTCGTTCTCGGTATCATGTGGTACCAAAAACGCCAAGAGCAGTCCAGAAAAAGACTTTATTGA

Protein

MKLDFSTMIHQRISWVQILCATLFLNPIFAEWNTRDYIRREHSLTKPYQGSGMSLPYWDFLGSTIVTSNYVRLTPDLQSKAGALWNTVPCNTRNWELQVQFKVHGRGKELFGDGFAIWYVKERMESGPVFGSKDYFNGLAIILDTYSNHNGAHNHQHPYISAMVNNGTLHYDHDRDGTHTQLSGCEAKFRNFNHDSHISIVYRDDTLIVSTDLEGKNAWKECLKVENVLLPTGYYFGASATTGDLSDNHDIISIKMFELDLLESQKKDEDRSHIIPSAASFEAPRERIEDAKPAMSGIKTFLWMMFVAIVIIVLVVLGIMWYQKRQEQSRKRLY

Uniprot

H9JMT6   A0A2A4JCQ2   E7EC18   A0A0L7LRV7   A0A2H1WIV8   A0A212EM81   + More
A0A1E1WTZ7   S4PCC9   A0A194PJU8   E2BH30   K7J8S0   E9ICB0   A0A067R7B1   A0A154PSX6   V9IFA2   A0A151WQX0   A0A088AEZ9   A0A151I8V2   A0A026WBZ9   A0A0L7QKW1   A0A0M8ZUN1   A0A158NXN3   A0A232EYZ5   A0A1B6FSF5   A0A1Y1KZI7   D6X3B0   A0A1B6LHU9   A0A2A3ECC8   A0A1B6IB06   A0A195BRR8   A0A0N8CR05   A0A0P4ZPL0   A0A0P5CR21   J3JZI3   A0A0N7ZPL1   A0A195E4M0   B7QFT9   A0A1B6CZ37   A0A0T6B360   A0A0K8RMH6   E0VUZ8   E9G8W7   A0A293MRX8   A0A0P6AH22   A0A182XF66   Q7QA71   A0A182HVN7   A0A182V8Q8   A0A182KZS1   A0A2R5L9I5   A0A182PLG9   A0A182UAE7   V5IC29   A0A1L8E3B8   U4UM14   A0A182Y909   A0A1L8E362   A0A1L8E2V9   A0A1L8E2X2   N6SYS6   A0A182RI26   A0A182TBZ5   A0A182FAF3   A0A2M3ZKW9   A0A2M4AKU1   A0A2M4BTM6   A0A182MT70   A0A0P5WGH0   T1DNL0   W5JWA7   A0A0P5XHL4   A0A084VDK1   A0A182W383   A0A0P6JRH1   A0A0P5P1W9   A0A1B0GI93   A0A182K4W2   T1ISH8   Q16SI7   A0A224Z396   A0A131Z571   A0A023FYY7   L7LYV5   A0A0P6BXR7   G3MI02   A0A0A9VTR0   A0A182ILX8   A0A023FPA0   A0A182GZZ9   U5ER85   A0A023FER3   T1E2S8   A0A1Z5LBH1   B0W3A9   A0A1Q3F5W4   A0A1Q3F605   B4MBX6   A0A0N8ECK5   A0A0P5TUB7   A0A087TWC9  

Pubmed

19121390    26227816    22118469    23622113    26354079    20798317    + More
20075255    21282665    24845553    24508170    30249741    21347285    28648823    28004739    18362917    19820115    22516182    20566863    21292972    12364791    14747013    17210077    20966253    25765539    23537049    25244985    20920257    23761445    24438588    17510324    28797301    26830274    25576852    22216098    25401762    26823975    26483478    24330624    28528879    17994087   

EMBL

BABH01016860    NWSH01002104    PCG69173.1    HQ645942    ADU25045.1    JTDY01000233    + More
KOB78139.1    ODYU01008904    SOQ52896.1    AGBW02013887    OWR42588.1    GDQN01000610    JAT90444.1    GAIX01004241    JAA88319.1    KQ459601    KPI93706.1    GL448268    EFN84951.1    GL762231    EFZ21795.1    KK852895    KDR14191.1    KQ435180    KZC15011.1    JR041046    AEY59347.1    KQ982815    KYQ50240.1    KQ978326    KYM95094.1    KK107323    QOIP01000002    EZA52584.1    RLU25875.1    KQ414940    KOC59220.1    KQ435879    KOX69869.1    ADTU01000475    ADTU01000476    NNAY01001520    OXU23706.1    GECZ01016651    JAS53118.1    GEZM01075069    JAV64307.1    KQ971372    EFA10355.1    GEBQ01016758    JAT23219.1    KZ288287    PBC29433.1    GECU01023609    JAS84097.1    KQ976423    KYM88919.1    GDIP01107407    JAL96307.1    GDIP01214397    GDIP01210645    GDIQ01040027    LRGB01002451    JAJ12757.1    JAN54710.1    KZS07650.1    GDIP01166736    JAJ56666.1    BT128665    AEE63622.1    GDIP01225049    JAI98352.1    KQ979685    KYN19804.1    ABJB010313462    ABJB010369059    ABJB010817547    ABJB010859285    ABJB011110643    DS927877    EEC17711.1    GEDC01018765    GEDC01005033    JAS18533.1    JAS32265.1    LJIG01016044    KRT81782.1    GADI01001710    JAA72098.1    DS235797    EEB17204.1    GL732535    EFX84199.1    GFWV01018824    MAA43552.1    GDIP01042770    JAM60945.1    AAAB01008898    EAA09126.4    APCN01005808    GGLE01002012    MBY06138.1    GANP01014407    JAB70061.1    GFDF01001012    JAV13072.1    KB632271    ERL91045.1    GFDF01001005    JAV13079.1    GFDF01001004    JAV13080.1    GFDF01001013    JAV13071.1    APGK01059049    KB741292    ENN70383.1    GGFM01008392    MBW29143.1    GGFK01008082    MBW41403.1    GGFJ01007223    MBW56364.1    AXCM01000104    GDIP01099611    JAM04104.1    GAMD01002760    JAA98830.1    ADMH02000180    ETN67460.1    GDIP01071966    JAM31749.1    ATLV01011556    KE524695    KFB36045.1    GDIQ01011422    JAN83315.1    GDIQ01134693    JAL17033.1    AJWK01013575    JH431432    CH477673    EAT37418.1    GFPF01009416    MAA20562.1    GEDV01002100    JAP86457.1    GBBL01001410    JAC25910.1    GACK01008237    JAA56797.1    GDIP01009090    JAM94625.1    JO841503    AEO33120.1    GBHO01045013    GBHO01017606    GBRD01001718    GDHC01005497    JAF98590.1    JAG25998.1    JAG64103.1    JAQ13132.1    GBBK01001797    JAC22685.1    JXUM01100343    JXUM01100344    KQ564561    KXJ72087.1    GANO01002916    JAB56955.1    GBBK01004500    JAC19982.1    GALA01001025    JAA93827.1    GFJQ02002402    JAW04568.1    DS231831    EDS31252.1    GFDL01012142    JAV22903.1    GFDL01012102    JAV22943.1    CH940656    EDW58597.1    GDIQ01040028    JAN54709.1    GDIP01121502    JAL82212.1    KK117063    KFM69418.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000007151    UP000053268    UP000008237    + More
UP000002358    UP000027135    UP000076502    UP000075809    UP000005203    UP000078542    UP000053097    UP000279307    UP000053825    UP000053105    UP000005205    UP000215335    UP000007266    UP000242457    UP000078540    UP000076858    UP000078492    UP000001555    UP000009046    UP000000305    UP000076407    UP000007062    UP000075840    UP000075903    UP000075882    UP000075885    UP000075902    UP000030742    UP000076408    UP000019118    UP000075900    UP000075901    UP000069272    UP000075883    UP000000673    UP000030765    UP000075920    UP000092461    UP000075881    UP000008820    UP000075880    UP000069940    UP000249989    UP000002320    UP000008792    UP000054359   

PRIDE

H9JMT6    B7QFT9    V5IC29   

Pfam

PF03388   Lectin_leg-like        + More
PF00035   dsrm
PF00069   Pkinase
PF00615   RGS

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR005052   Lectin_leg       
IPR035664   VIP36_lectin       
IPR027417   P-loop_NTPase       
IPR014720   dsRBD_dom       
IPR007096   RNA-dir_Rpol_phage_catalytic       
IPR036305   RGS_sf       
IPR000961   AGC-kinase_C       
IPR000719   Prot_kinase_dom       
IPR000239   GPCR_kinase       
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR016137   RGS       

SUPFAM

SSF49899   SSF49899        + More
SSF52540   SSF52540       
SSF48097   SSF48097       
SSF56112   SSF56112       

CDD

cd06901  lectin_VIP36_VIPL
cd00048  DSRM

ProteinModelPortal

H9JMT6   A0A2A4JCQ2   E7EC18   A0A0L7LRV7   A0A2H1WIV8   A0A212EM81   + More
A0A1E1WTZ7   S4PCC9   A0A194PJU8   E2BH30   K7J8S0   E9ICB0   A0A067R7B1   A0A154PSX6   V9IFA2   A0A151WQX0   A0A088AEZ9   A0A151I8V2   A0A026WBZ9   A0A0L7QKW1   A0A0M8ZUN1   A0A158NXN3   A0A232EYZ5   A0A1B6FSF5   A0A1Y1KZI7   D6X3B0   A0A1B6LHU9   A0A2A3ECC8   A0A1B6IB06   A0A195BRR8   A0A0N8CR05   A0A0P4ZPL0   A0A0P5CR21   J3JZI3   A0A0N7ZPL1   A0A195E4M0   B7QFT9   A0A1B6CZ37   A0A0T6B360   A0A0K8RMH6   E0VUZ8   E9G8W7   A0A293MRX8   A0A0P6AH22   A0A182XF66   Q7QA71   A0A182HVN7   A0A182V8Q8   A0A182KZS1   A0A2R5L9I5   A0A182PLG9   A0A182UAE7   V5IC29   A0A1L8E3B8   U4UM14   A0A182Y909   A0A1L8E362   A0A1L8E2V9   A0A1L8E2X2   N6SYS6   A0A182RI26   A0A182TBZ5   A0A182FAF3   A0A2M3ZKW9   A0A2M4AKU1   A0A2M4BTM6   A0A182MT70   A0A0P5WGH0   T1DNL0   W5JWA7   A0A0P5XHL4   A0A084VDK1   A0A182W383   A0A0P6JRH1   A0A0P5P1W9   A0A1B0GI93   A0A182K4W2   T1ISH8   Q16SI7   A0A224Z396   A0A131Z571   A0A023FYY7   L7LYV5   A0A0P6BXR7   G3MI02   A0A0A9VTR0   A0A182ILX8   A0A023FPA0   A0A182GZZ9   U5ER85   A0A023FER3   T1E2S8   A0A1Z5LBH1   B0W3A9   A0A1Q3F5W4   A0A1Q3F605   B4MBX6   A0A0N8ECK5   A0A0P5TUB7   A0A087TWC9  

PDB

2E6V     E-value=4.49338e-76,     Score=723

KEGG

101742130    K10082 lectin, mannose-binding 2 | (RefSeq) vesicular integral-membrane protein VIP36

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0030246   GO:0003723   GO:0003968   GO:0019079   GO:0007029   GO:0005537   GO:0030134   GO:0007030   GO:0005789   GO:0000139   GO:0006888   GO:0005793   GO:0007165   GO:0004703   GO:0005524   GO:0016020   GO:0003676   GO:0046872   GO:0030126   GO:0030117   GO:0006418   GO:0003707   GO:0006281   GO:0006259  

SignalP

Position:   1 - 30,         Likelihood:  0.744014

 

 

Length:

334

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

33.3552

Exp number, first 60 AAs:

10.75218

Total prob of N-in:

0.52627

POSSIBLE N-term signal

sequence

outside

1  -  299

TMhelix

300  -  322

inside

323  -  334

 

 

Pi

133.753584

Theta

144.556699

Tajima's D

-0.594574

CLR

0.015485

CSRT

0.228188590570471

Interpretation

Uncertain